Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04485

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
1,073,387	+				-2.9
1,073,412	+				-0.2
1,073,443	-				+0.3
1,073,467	+				-0.4
1,073,468	-				+0.7
1,073,474	+				+0.4
1,073,475	-				+0.8
1,073,477	+				+0.1
1,073,478	-				+0.0
1,073,563	-				-1.3
1,073,667	+				-0.2
1,073,739	+				-1.0
1,073,739	+				-0.8
1,073,873	+				-0.8
1,073,912	-				-0.6
1,073,915	+				-0.8
1,073,916	-				-0.4
1,073,935	-				+0.3
1,073,935	-				-0.5
1,074,016	-		CA265_RS04485	0.23	-0.3
1,074,044	+		CA265_RS04485	0.34	-1.5
1,074,075	-		CA265_RS04485	0.45	-0.2
1,074,081	-		CA265_RS04485	0.47	-0.6
1,074,089	-		CA265_RS04485	0.50	-0.8
1,074,202	+				-0.0
1,074,245	+				-1.5
1,074,245	+				-2.2
1,074,246	-				-1.6
1,074,246	-				+0.0
1,074,301	-				+0.4
1,074,301	-				-1.3
1,074,331	-				+0.5
1,074,419	+		CA265_RS04490	0.19	-1.1
1,074,510	+		CA265_RS04490	0.31	+0.7
1,074,511	-		CA265_RS04490	0.31	+0.2
1,074,532	-		CA265_RS04490	0.34	+0.5
1,074,540	+		CA265_RS04490	0.35	+0.5
1,074,560	+		CA265_RS04490	0.37	-0.2
1,074,637	+		CA265_RS04490	0.47	+0.7
1,074,711	-		CA265_RS04490	0.57	+0.4
1,074,711	-		CA265_RS04490	0.57	-0.9
1,074,711	-		CA265_RS04490	0.57	-0.4
1,074,740	+		CA265_RS04490	0.61	+0.2
1,074,772	-		CA265_RS04490	0.65	-0.6
1,074,783	-		CA265_RS04490	0.67	+0.7
1,074,935	-		CA265_RS04490	0.86	-0.9
1,074,935	-		CA265_RS04490	0.86	-1.7
1,074,935	-		CA265_RS04490	0.86	+0.4
1,074,955	-		CA265_RS04490	0.89	-0.5
1,075,012	+				+0.1
1,075,013	-				-3.1
1,075,068	-				+0.4
1,075,164	-				+0.2
1,075,184	+				-0.9
1,075,190	+				-0.7
1,075,191	-				+0.4
1,075,200	-				-0.5
1,075,203	+				+0.1
1,075,204	-				-1.6
1,075,215	-				+0.1
1,075,218	+				-0.3