Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2064 and EX28DRAFT_2065 are separated by 92 nucleotides EX28DRAFT_2065 and EX28DRAFT_2066 are separated by 69 nucleotides
EX28DRAFT_2064: EX28DRAFT_2064 - Predicted nucleoside-diphosphate-sugar epimerases, at 2,087,683 to 2,089,119
_2064
EX28DRAFT_2065: EX28DRAFT_2065 - Nucleoside-diphosphate-sugar epimerases, at 2,089,212 to 2,090,225
_2065
EX28DRAFT_2066: EX28DRAFT_2066 - Uncharacterized protein contain chitin-binding domain type 3, at 2,090,295 to 2,092,124
_2066
Position (kb)
2089
2090
2091 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.326 kb on - strand, within EX28DRAFT_2064 at 2089.122 kb on - strand at 2089.211 kb on + strand at 2089.211 kb on + strand at 2089.539 kb on - strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.749 kb on - strand, within EX28DRAFT_2065 at 2089.779 kb on + strand, within EX28DRAFT_2065 at 2089.830 kb on + strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.957 kb on + strand, within EX28DRAFT_2065 at 2090.049 kb on - strand, within EX28DRAFT_2065 at 2090.087 kb on - strand, within EX28DRAFT_2065 at 2090.097 kb on - strand, within EX28DRAFT_2065 at 2090.377 kb on + strand at 2090.503 kb on - strand, within EX28DRAFT_2066 at 2090.515 kb on + strand, within EX28DRAFT_2066 at 2090.516 kb on - strand, within EX28DRAFT_2066 at 2090.516 kb on - strand, within EX28DRAFT_2066 at 2090.603 kb on + strand, within EX28DRAFT_2066 at 2090.604 kb on - strand, within EX28DRAFT_2066 at 2090.657 kb on + strand, within EX28DRAFT_2066 at 2090.657 kb on + strand, within EX28DRAFT_2066 at 2090.659 kb on + strand, within EX28DRAFT_2066 at 2090.659 kb on + strand, within EX28DRAFT_2066 at 2090.660 kb on - strand, within EX28DRAFT_2066 at 2090.786 kb on + strand, within EX28DRAFT_2066 at 2090.787 kb on - strand, within EX28DRAFT_2066 at 2090.787 kb on - strand, within EX28DRAFT_2066 at 2090.932 kb on + strand, within EX28DRAFT_2066 at 2090.932 kb on + strand, within EX28DRAFT_2066 at 2090.933 kb on - strand, within EX28DRAFT_2066 at 2090.933 kb on - strand, within EX28DRAFT_2066 at 2090.953 kb on + strand, within EX28DRAFT_2066 at 2090.954 kb on - strand, within EX28DRAFT_2066 at 2090.954 kb on - strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.170 kb on - strand, within EX28DRAFT_2066 at 2091.170 kb on - strand, within EX28DRAFT_2066
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 2,088,250 + EX28DRAFT_2064 0.39 +0.3 2,088,250 + EX28DRAFT_2064 0.39 -0.0 2,088,326 - EX28DRAFT_2064 0.45 -0.5 2,089,122 - -0.5 2,089,211 + +0.4 2,089,211 + +0.8 2,089,539 - EX28DRAFT_2065 0.32 -0.4 2,089,544 + EX28DRAFT_2065 0.33 +0.3 2,089,544 + EX28DRAFT_2065 0.33 +0.1 2,089,545 - EX28DRAFT_2065 0.33 -1.0 2,089,545 - EX28DRAFT_2065 0.33 -0.2 2,089,692 - EX28DRAFT_2065 0.47 +0.3 2,089,692 - EX28DRAFT_2065 0.47 +0.4 2,089,749 - EX28DRAFT_2065 0.53 +2.0 2,089,779 + EX28DRAFT_2065 0.56 -0.1 2,089,830 + EX28DRAFT_2065 0.61 -1.1 2,089,831 - EX28DRAFT_2065 0.61 -0.3 2,089,831 - EX28DRAFT_2065 0.61 -0.5 2,089,831 - EX28DRAFT_2065 0.61 -1.8 2,089,905 + EX28DRAFT_2065 0.68 -1.2 2,089,905 + EX28DRAFT_2065 0.68 -0.9 2,089,905 + EX28DRAFT_2065 0.68 -0.1 2,089,957 + EX28DRAFT_2065 0.73 +0.5 2,090,049 - EX28DRAFT_2065 0.83 -0.6 2,090,087 - EX28DRAFT_2065 0.86 -0.4 2,090,097 - EX28DRAFT_2065 0.87 -0.5 2,090,377 + +0.6 2,090,503 - EX28DRAFT_2066 0.11 -0.0 2,090,515 + EX28DRAFT_2066 0.12 -0.0 2,090,516 - EX28DRAFT_2066 0.12 +0.8 2,090,516 - EX28DRAFT_2066 0.12 +0.1 2,090,603 + EX28DRAFT_2066 0.17 -0.4 2,090,604 - EX28DRAFT_2066 0.17 -1.3 2,090,657 + EX28DRAFT_2066 0.20 +0.1 2,090,657 + EX28DRAFT_2066 0.20 +0.2 2,090,659 + EX28DRAFT_2066 0.20 -0.5 2,090,659 + EX28DRAFT_2066 0.20 +0.5 2,090,660 - EX28DRAFT_2066 0.20 +0.3 2,090,786 + EX28DRAFT_2066 0.27 +0.0 2,090,787 - EX28DRAFT_2066 0.27 +1.5 2,090,787 - EX28DRAFT_2066 0.27 -0.2 2,090,932 + EX28DRAFT_2066 0.35 -0.4 2,090,932 + EX28DRAFT_2066 0.35 -0.1 2,090,933 - EX28DRAFT_2066 0.35 +2.0 2,090,933 - EX28DRAFT_2066 0.35 -1.4 2,090,953 + EX28DRAFT_2066 0.36 -0.1 2,090,954 - EX28DRAFT_2066 0.36 +0.3 2,090,954 - EX28DRAFT_2066 0.36 +0.2 2,091,010 + EX28DRAFT_2066 0.39 +0.7 2,091,010 + EX28DRAFT_2066 0.39 -0.6 2,091,010 + EX28DRAFT_2066 0.39 +1.2 2,091,011 - EX28DRAFT_2066 0.39 -0.3 2,091,011 - EX28DRAFT_2066 0.39 -1.0 2,091,011 - EX28DRAFT_2066 0.39 -0.3 2,091,170 - EX28DRAFT_2066 0.48 -0.3 2,091,170 - EX28DRAFT_2066 0.48 -0.3
Or see this region's nucleotide sequence