Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS02150 and ABIE40_RS02155 are separated by 426 nucleotides ABIE40_RS02155 and ABIE40_RS02160 are separated by 233 nucleotides ABIE40_RS02160 and ABIE40_RS02165 are separated by 57 nucleotides
ABIE40_RS02150: ABIE40_RS02150 - glucose-6-phosphate isomerase, at 421,156 to 422,781
_RS02150
ABIE40_RS02155: ABIE40_RS02155 - long-chain fatty acid--CoA ligase, at 423,208 to 424,908
_RS02155
ABIE40_RS02160: ABIE40_RS02160 - PRC-barrel domain-containing protein, at 425,142 to 425,534
_RS02160
ABIE40_RS02165: ABIE40_RS02165 - glycoside hydrolase family 2 protein, at 425,592 to 428,033
_RS02165
Position (kb) 423
424
425 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4 at 422.819 kb on + strand at 422.819 kb on + strand at 422.820 kb on - strand at 422.830 kb on + strand at 422.831 kb on - strand at 422.831 kb on - strand at 422.916 kb on - strand at 422.916 kb on - strand at 422.917 kb on + strand at 422.917 kb on + strand at 422.917 kb on + strand at 422.917 kb on + strand at 422.918 kb on - strand at 422.918 kb on - strand at 422.918 kb on - strand at 422.963 kb on + strand at 422.963 kb on + strand at 423.020 kb on - strand at 423.024 kb on + strand at 423.024 kb on + strand at 423.024 kb on + strand at 423.024 kb on + strand at 423.024 kb on + strand at 423.025 kb on - strand at 423.025 kb on - strand at 423.045 kb on + strand at 423.045 kb on + strand at 423.046 kb on - strand at 423.046 kb on - strand at 423.180 kb on + strand at 423.293 kb on + strand at 423.293 kb on + strand at 423.293 kb on + strand at 423.294 kb on - strand at 423.294 kb on - strand at 423.294 kb on - strand at 423.294 kb on - strand at 423.362 kb on - strand at 423.467 kb on + strand, within ABIE40_RS02155 at 423.468 kb on - strand, within ABIE40_RS02155 at 423.468 kb on - strand, within ABIE40_RS02155 at 423.505 kb on - strand, within ABIE40_RS02155 at 423.522 kb on + strand, within ABIE40_RS02155 at 423.522 kb on + strand, within ABIE40_RS02155 at 423.523 kb on - strand, within ABIE40_RS02155 at 423.525 kb on - strand, within ABIE40_RS02155 at 423.525 kb on - strand, within ABIE40_RS02155 at 423.566 kb on + strand, within ABIE40_RS02155 at 423.566 kb on + strand, within ABIE40_RS02155 at 423.567 kb on - strand, within ABIE40_RS02155 at 423.615 kb on - strand, within ABIE40_RS02155 at 423.697 kb on - strand, within ABIE40_RS02155 at 423.797 kb on + strand, within ABIE40_RS02155 at 423.797 kb on + strand, within ABIE40_RS02155 at 423.797 kb on + strand, within ABIE40_RS02155 at 423.798 kb on - strand, within ABIE40_RS02155 at 423.798 kb on - strand, within ABIE40_RS02155 at 423.963 kb on + strand, within ABIE40_RS02155 at 423.963 kb on + strand, within ABIE40_RS02155 at 423.963 kb on + strand, within ABIE40_RS02155 at 423.991 kb on + strand, within ABIE40_RS02155 at 423.991 kb on + strand, within ABIE40_RS02155 at 423.991 kb on + strand, within ABIE40_RS02155 at 424.032 kb on + strand, within ABIE40_RS02155 at 424.032 kb on + strand, within ABIE40_RS02155 at 424.032 kb on + strand, within ABIE40_RS02155 at 424.033 kb on - strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.083 kb on + strand, within ABIE40_RS02155 at 424.084 kb on - strand, within ABIE40_RS02155 at 424.084 kb on - strand, within ABIE40_RS02155 at 424.084 kb on - strand, within ABIE40_RS02155 at 424.084 kb on - strand, within ABIE40_RS02155 at 424.088 kb on + strand, within ABIE40_RS02155 at 424.089 kb on - strand, within ABIE40_RS02155 at 424.089 kb on - strand, within ABIE40_RS02155 at 424.239 kb on + strand, within ABIE40_RS02155 at 424.239 kb on + strand, within ABIE40_RS02155 at 424.239 kb on + strand, within ABIE40_RS02155 at 424.239 kb on + strand, within ABIE40_RS02155 at 424.240 kb on - strand, within ABIE40_RS02155 at 424.240 kb on - strand, within ABIE40_RS02155 at 424.241 kb on + strand, within ABIE40_RS02155 at 424.241 kb on + strand, within ABIE40_RS02155 at 424.241 kb on + strand, within ABIE40_RS02155 at 424.242 kb on - strand, within ABIE40_RS02155 at 424.242 kb on - strand, within ABIE40_RS02155 at 424.242 kb on - strand, within ABIE40_RS02155 at 424.242 kb on - strand, within ABIE40_RS02155 at 424.242 kb on - strand, within ABIE40_RS02155 at 424.257 kb on + strand, within ABIE40_RS02155 at 424.551 kb on + strand, within ABIE40_RS02155 at 424.551 kb on + strand, within ABIE40_RS02155 at 424.552 kb on - strand, within ABIE40_RS02155 at 424.552 kb on - strand, within ABIE40_RS02155 at 424.552 kb on - strand, within ABIE40_RS02155 at 424.553 kb on + strand, within ABIE40_RS02155 at 424.553 kb on + strand, within ABIE40_RS02155 at 424.553 kb on + strand, within ABIE40_RS02155 at 424.553 kb on + strand, within ABIE40_RS02155 at 424.554 kb on - strand, within ABIE40_RS02155 at 424.554 kb on - strand, within ABIE40_RS02155 at 424.601 kb on + strand, within ABIE40_RS02155 at 424.767 kb on - strand at 424.767 kb on - strand at 424.767 kb on - strand at 424.989 kb on + strand at 424.989 kb on + strand at 424.989 kb on + strand at 424.989 kb on + strand at 424.989 kb on + strand at 424.989 kb on + strand at 425.019 kb on - strand at 425.020 kb on + strand at 425.020 kb on + strand at 425.020 kb on + strand at 425.020 kb on + strand at 425.020 kb on + strand at 425.020 kb on + strand at 425.021 kb on - strand at 425.027 kb on + strand at 425.033 kb on - strand at 425.043 kb on + strand at 425.066 kb on + strand at 425.066 kb on + strand at 425.066 kb on + strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.067 kb on - strand at 425.147 kb on + strand at 425.147 kb on + strand at 425.147 kb on + strand at 425.239 kb on - strand, within ABIE40_RS02160 at 425.258 kb on + strand, within ABIE40_RS02160 at 425.258 kb on + strand, within ABIE40_RS02160 at 425.258 kb on + strand, within ABIE40_RS02160 at 425.259 kb on - strand, within ABIE40_RS02160 at 425.310 kb on + strand, within ABIE40_RS02160 at 425.310 kb on + strand, within ABIE40_RS02160 at 425.310 kb on + strand, within ABIE40_RS02160 at 425.311 kb on - strand, within ABIE40_RS02160 at 425.385 kb on + strand, within ABIE40_RS02160 at 425.385 kb on + strand, within ABIE40_RS02160 at 425.385 kb on + strand, within ABIE40_RS02160 at 425.386 kb on - strand, within ABIE40_RS02160 at 425.386 kb on - strand, within ABIE40_RS02160 at 425.386 kb on - strand, within ABIE40_RS02160 at 425.390 kb on + strand, within ABIE40_RS02160 at 425.390 kb on + strand, within ABIE40_RS02160 at 425.451 kb on + strand, within ABIE40_RS02160 at 425.451 kb on + strand, within ABIE40_RS02160 at 425.451 kb on + strand, within ABIE40_RS02160 at 425.451 kb on + strand, within ABIE40_RS02160 at 425.452 kb on - strand, within ABIE40_RS02160 at 425.452 kb on - strand, within ABIE40_RS02160 at 425.452 kb on - strand, within ABIE40_RS02160 at 425.474 kb on + strand, within ABIE40_RS02160 at 425.475 kb on + strand, within ABIE40_RS02160 at 425.476 kb on - strand, within ABIE40_RS02160 at 425.483 kb on + strand, within ABIE40_RS02160 at 425.483 kb on + strand, within ABIE40_RS02160 at 425.499 kb on + strand at 425.505 kb on + strand at 425.508 kb on + strand at 425.508 kb on + strand at 425.508 kb on + strand at 425.508 kb on + strand at 425.508 kb on + strand at 425.508 kb on + strand at 425.509 kb on - strand at 425.509 kb on - strand at 425.509 kb on - strand at 425.532 kb on + strand at 425.532 kb on + strand at 425.532 kb on + strand at 425.532 kb on + strand at 425.532 kb on + strand at 425.533 kb on - strand at 425.533 kb on - strand at 425.681 kb on + strand at 425.681 kb on + strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.682 kb on - strand at 425.861 kb on + strand, within ABIE40_RS02165 at 425.875 kb on + strand, within ABIE40_RS02165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 422,819 + -0.3 422,819 + -1.5 422,820 - +0.3 422,830 + -2.2 422,831 - -0.8 422,831 - -0.6 422,916 - -3.5 422,916 - -0.3 422,917 + -1.1 422,917 + -1.1 422,917 + -0.8 422,917 + -2.0 422,918 - -1.3 422,918 - +0.4 422,918 - -2.6 422,963 + +0.5 422,963 + -2.0 423,020 - -0.7 423,024 + -0.8 423,024 + -0.3 423,024 + -0.3 423,024 + -1.8 423,024 + -2.1 423,025 - -1.0 423,025 - +0.2 423,045 + -2.6 423,045 + -0.5 423,046 - -0.9 423,046 - -0.0 423,180 + -4.1 423,293 + -2.2 423,293 + -3.4 423,293 + -4.2 423,294 - -1.7 423,294 - -1.6 423,294 - -0.3 423,294 - -4.7 423,362 - -3.0 423,467 + ABIE40_RS02155 0.15 -0.0 423,468 - ABIE40_RS02155 0.15 -1.6 423,468 - ABIE40_RS02155 0.15 -1.3 423,505 - ABIE40_RS02155 0.17 -0.3 423,522 + ABIE40_RS02155 0.18 -2.5 423,522 + ABIE40_RS02155 0.18 -5.5 423,523 - ABIE40_RS02155 0.19 -4.2 423,525 - ABIE40_RS02155 0.19 +0.4 423,525 - ABIE40_RS02155 0.19 -5.8 423,566 + ABIE40_RS02155 0.21 -1.6 423,566 + ABIE40_RS02155 0.21 -4.7 423,567 - ABIE40_RS02155 0.21 -0.0 423,615 - ABIE40_RS02155 0.24 +0.3 423,697 - ABIE40_RS02155 0.29 -5.3 423,797 + ABIE40_RS02155 0.35 -2.6 423,797 + ABIE40_RS02155 0.35 -4.0 423,797 + ABIE40_RS02155 0.35 -1.3 423,798 - ABIE40_RS02155 0.35 -1.3 423,798 - ABIE40_RS02155 0.35 -4.1 423,963 + ABIE40_RS02155 0.44 -1.7 423,963 + ABIE40_RS02155 0.44 -4.1 423,963 + ABIE40_RS02155 0.44 -4.5 423,991 + ABIE40_RS02155 0.46 -1.7 423,991 + ABIE40_RS02155 0.46 -3.0 423,991 + ABIE40_RS02155 0.46 -1.2 424,032 + ABIE40_RS02155 0.48 -2.0 424,032 + ABIE40_RS02155 0.48 -0.8 424,032 + ABIE40_RS02155 0.48 -4.3 424,033 - ABIE40_RS02155 0.49 -3.3 424,083 + ABIE40_RS02155 0.51 -5.1 424,083 + ABIE40_RS02155 0.51 -3.9 424,083 + ABIE40_RS02155 0.51 -4.4 424,083 + ABIE40_RS02155 0.51 -3.4 424,083 + ABIE40_RS02155 0.51 -3.4 424,083 + ABIE40_RS02155 0.51 -3.0 424,083 + ABIE40_RS02155 0.51 -1.8 424,084 - ABIE40_RS02155 0.51 -0.3 424,084 - ABIE40_RS02155 0.51 -2.0 424,084 - ABIE40_RS02155 0.51 -2.1 424,084 - ABIE40_RS02155 0.51 -2.6 424,088 + ABIE40_RS02155 0.52 -0.8 424,089 - ABIE40_RS02155 0.52 -3.9 424,089 - ABIE40_RS02155 0.52 -2.4 424,239 + ABIE40_RS02155 0.61 -2.5 424,239 + ABIE40_RS02155 0.61 -4.7 424,239 + ABIE40_RS02155 0.61 -3.9 424,239 + ABIE40_RS02155 0.61 -4.2 424,240 - ABIE40_RS02155 0.61 -3.1 424,240 - ABIE40_RS02155 0.61 -2.0 424,241 + ABIE40_RS02155 0.61 -3.1 424,241 + ABIE40_RS02155 0.61 -3.1 424,241 + ABIE40_RS02155 0.61 -2.6 424,242 - ABIE40_RS02155 0.61 -2.9 424,242 - ABIE40_RS02155 0.61 -4.3 424,242 - ABIE40_RS02155 0.61 -2.9 424,242 - ABIE40_RS02155 0.61 -4.9 424,242 - ABIE40_RS02155 0.61 -2.8 424,257 + ABIE40_RS02155 0.62 -2.5 424,551 + ABIE40_RS02155 0.79 -3.8 424,551 + ABIE40_RS02155 0.79 -4.1 424,552 - ABIE40_RS02155 0.79 -5.1 424,552 - ABIE40_RS02155 0.79 -2.9 424,552 - ABIE40_RS02155 0.79 -2.5 424,553 + ABIE40_RS02155 0.79 -2.5 424,553 + ABIE40_RS02155 0.79 -3.4 424,553 + ABIE40_RS02155 0.79 -4.9 424,553 + ABIE40_RS02155 0.79 -2.5 424,554 - ABIE40_RS02155 0.79 -4.4 424,554 - ABIE40_RS02155 0.79 -1.2 424,601 + ABIE40_RS02155 0.82 -1.2 424,767 - -5.7 424,767 - -6.0 424,767 - -3.6 424,989 + -2.5 424,989 + -4.0 424,989 + -2.0 424,989 + -4.9 424,989 + -2.6 424,989 + -4.1 425,019 - +0.2 425,020 + -4.1 425,020 + +0.1 425,020 + -0.0 425,020 + -3.3 425,020 + -2.1 425,020 + -2.0 425,021 - -2.2 425,027 + -2.4 425,033 - -1.6 425,043 + -2.4 425,066 + -0.4 425,066 + -0.6 425,066 + -1.9 425,067 - +0.2 425,067 - -0.1 425,067 - +0.7 425,067 - +1.0 425,067 - +0.4 425,067 - -0.0 425,067 - +1.7 425,147 + -0.1 425,147 + +2.1 425,147 + +1.4 425,239 - ABIE40_RS02160 0.25 -2.2 425,258 + ABIE40_RS02160 0.30 -0.7 425,258 + ABIE40_RS02160 0.30 +0.1 425,258 + ABIE40_RS02160 0.30 +0.5 425,259 - ABIE40_RS02160 0.30 +1.8 425,310 + ABIE40_RS02160 0.43 -1.0 425,310 + ABIE40_RS02160 0.43 +0.1 425,310 + ABIE40_RS02160 0.43 +0.4 425,311 - ABIE40_RS02160 0.43 -0.3 425,385 + ABIE40_RS02160 0.62 +0.1 425,385 + ABIE40_RS02160 0.62 -0.4 425,385 + ABIE40_RS02160 0.62 +0.5 425,386 - ABIE40_RS02160 0.62 -0.4 425,386 - ABIE40_RS02160 0.62 +0.3 425,386 - ABIE40_RS02160 0.62 +0.2 425,390 + ABIE40_RS02160 0.63 +0.7 425,390 + ABIE40_RS02160 0.63 +1.0 425,451 + ABIE40_RS02160 0.79 +0.8 425,451 + ABIE40_RS02160 0.79 +0.1 425,451 + ABIE40_RS02160 0.79 +0.4 425,451 + ABIE40_RS02160 0.79 +4.0 425,452 - ABIE40_RS02160 0.79 +1.4 425,452 - ABIE40_RS02160 0.79 -0.7 425,452 - ABIE40_RS02160 0.79 +1.0 425,474 + ABIE40_RS02160 0.84 +0.1 425,475 + ABIE40_RS02160 0.85 -0.5 425,476 - ABIE40_RS02160 0.85 +0.3 425,483 + ABIE40_RS02160 0.87 +1.0 425,483 + ABIE40_RS02160 0.87 -0.3 425,499 + +0.7 425,505 + +0.1 425,508 + +1.0 425,508 + +2.6 425,508 + +1.3 425,508 + -0.0 425,508 + -0.4 425,508 + +2.2 425,509 - +0.6 425,509 - -1.5 425,509 - +1.1 425,532 + -0.1 425,532 + -2.9 425,532 + -2.3 425,532 + +1.1 425,532 + +0.6 425,533 - -1.7 425,533 - +0.9 425,681 + -0.3 425,681 + -0.6 425,682 - +0.6 425,682 - +2.3 425,682 - +3.3 425,682 - +0.4 425,682 - -1.4 425,682 - -0.5 425,682 - -0.4 425,861 + ABIE40_RS02165 0.11 +2.0 425,875 + ABIE40_RS02165 0.12 +2.0
Or see this region's nucleotide sequence