Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03465

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,627,188	-		CCNA_03463	0.68	+0.8
3,627,219	-		CCNA_03463	0.70	-0.7
3,627,241	-		CCNA_03463	0.72	-0.2
3,627,256	-		CCNA_03463	0.73	-0.3
3,627,256	-		CCNA_03463	0.73	+0.2
3,627,279	+		CCNA_03463	0.75	-0.9
3,627,283	+		CCNA_03463	0.75	-0.9
3,627,286	+		CCNA_03463	0.75	-0.1
3,627,296	+		CCNA_03463	0.76	-3.2
3,627,340	+		CCNA_03463	0.79	-1.0
3,627,381	+		CCNA_03463	0.82	-1.0
3,627,418	-		CCNA_03463	0.85	+1.1
3,627,518	+				+0.5
3,627,526	-				+0.0
3,627,583	-				-0.3
3,627,600	+				-0.3
3,627,649	-				+0.4
3,627,665	+				-0.7
3,627,735	+				-2.5
3,627,743	-				+0.5
3,627,745	+				-1.3
3,627,774	+				-2.8
3,627,931	+		CCNA_03464	0.53	+1.3
3,627,939	-		CCNA_03464	0.55	+0.1
3,627,950	-		CCNA_03464	0.58	+0.5
3,628,020	-		CCNA_03464	0.77	-1.1
3,628,077	-				-0.5
3,628,080	+				+0.6
3,628,088	-				+0.3
3,628,089	-				-0.7
3,628,135	+				+0.7
3,628,152	-				+0.5
3,628,197	-				-0.3
3,628,202	+				-0.1
3,628,202	+				-0.6
3,628,210	-				-0.1
3,628,224	+				+0.1
3,628,308	-		CCNA_03465	0.16	-0.8
3,628,365	+		CCNA_03465	0.21	-0.3
3,628,365	-		CCNA_03465	0.21	+0.1
3,628,407	-		CCNA_03465	0.25	+1.6
3,628,431	+		CCNA_03465	0.27	-1.7
3,628,471	+		CCNA_03465	0.31	+0.3
3,628,471	+		CCNA_03465	0.31	-1.5
3,628,471	+		CCNA_03465	0.31	+0.4
3,628,479	-		CCNA_03465	0.32	-0.5
3,628,517	+		CCNA_03465	0.35	-2.7
3,628,517	-		CCNA_03465	0.35	-0.2
3,628,569	-		CCNA_03465	0.40	+0.1
3,628,607	-		CCNA_03465	0.43	+0.3
3,628,609	-		CCNA_03465	0.43	-0.6
3,628,656	+		CCNA_03465	0.47	+0.0
3,628,668	-		CCNA_03465	0.48	-0.4
3,628,674	-		CCNA_03465	0.49	-0.1
3,628,700	-		CCNA_03465	0.51	+0.4
3,628,702	+		CCNA_03465	0.51	+0.4
3,628,702	+		CCNA_03465	0.51	+0.7
3,628,702	+		CCNA_03465	0.51	-0.9
3,628,778	+		CCNA_03465	0.58	-1.3
3,628,814	-		CCNA_03465	0.61	-0.6
3,628,816	+		CCNA_03465	0.61	-0.7
3,628,888	-		CCNA_03465	0.68	-0.7
3,628,899	+		CCNA_03465	0.69	-2.3
3,628,902	-		CCNA_03465	0.69	-0.1
3,628,922	+		CCNA_03465	0.71	-1.2
3,628,922	+		CCNA_03465	0.71	-0.1
3,628,930	-		CCNA_03465	0.72	-0.8
3,628,952	+		CCNA_03465	0.73	+0.1
3,628,967	+		CCNA_03465	0.75	-1.6
3,628,967	+		CCNA_03465	0.75	+0.5
3,628,975	-		CCNA_03465	0.76	-0.5
3,628,975	-		CCNA_03465	0.76	+0.2
3,629,056	+		CCNA_03465	0.83	-0.3
3,629,064	-		CCNA_03465	0.83	-1.3
3,629,064	-		CCNA_03465	0.83	-0.1
3,629,080	+		CCNA_03465	0.85	-1.2
3,629,080	+		CCNA_03465	0.85	-0.1
3,629,083	-		CCNA_03465	0.85	-1.3
3,629,102	+		CCNA_03465	0.87	+1.7
3,629,110	-		CCNA_03465	0.88	-0.3
3,629,122	-		CCNA_03465	0.89	-0.2
3,629,128	+		CCNA_03465	0.89	-0.1
3,629,129	+		CCNA_03465	0.89	+0.2
3,629,129	+		CCNA_03465	0.89	-0.1
3,629,235	+				+0.1
3,629,290	-				+0.1
3,629,317	+				+0.4
3,629,317	+				-3.1
3,629,325	-				+0.6
3,629,360	+				+0.4
3,629,360	+				+0.0
3,629,366	+				+0.1
3,629,366	+				-0.5
3,629,368	-				+0.1
3,629,390	+				-0.9
3,629,392	+				+0.7
3,629,417	+				-2.0
3,629,424	-				-0.1
3,629,433	+				-1.0
3,629,441	-				-0.6
3,629,441	-				+0.2
3,629,504	+				+0.1
3,629,512	-				-0.0
3,629,513	-				+0.3
3,629,513	-				-0.5
3,629,527	+				+0.4
3,629,550	+				+1.5
3,629,550	+				-0.8
3,629,550	+				+0.4
3,629,550	+				+0.1
3,629,550	+				-0.2
3,629,550	+				+0.3
3,629,550	+				-0.1
3,629,550	+				+0.2
3,629,550	+				-0.9
3,629,550	+				-0.8
3,629,550	+				-0.2
3,629,558	-				-0.3
3,629,558	-				+0.2
3,629,558	-				+0.4
3,629,558	-				-0.3
3,629,558	-				-1.5
3,629,558	-				+0.5
3,629,558	-				-1.3
3,629,558	-				+1.4
3,629,558	-				+0.7
3,629,558	-				+0.7
3,629,627	-				+1.3
3,629,662	+				-0.6
3,629,696	+				-1.5
3,629,716	-		CCNA_03466	0.10	-1.1
3,629,795	-		CCNA_03466	0.20	-1.7
3,629,888	-		CCNA_03466	0.32	+1.4
3,629,895	-		CCNA_03466	0.32	-0.3
3,629,935	+		CCNA_03466	0.37	-0.5
3,629,945	+		CCNA_03466	0.39	-0.2
3,629,945	+		CCNA_03466	0.39	+0.6
3,629,953	-		CCNA_03466	0.40	-1.1
3,629,953	-		CCNA_03466	0.40	-1.1
3,629,953	-		CCNA_03466	0.40	-0.4
3,629,955	+		CCNA_03466	0.40	+0.2
3,630,010	+		CCNA_03466	0.47	-0.6
3,630,029	+		CCNA_03466	0.49	-0.5
3,630,055	-		CCNA_03466	0.52	-0.3
3,630,099	+		CCNA_03466	0.58	-0.2
3,630,107	-		CCNA_03466	0.59	-0.1
3,630,119	-		CCNA_03466	0.60	+0.2
3,630,138	+		CCNA_03466	0.63	-0.2
3,630,138	+		CCNA_03466	0.63	-0.2
3,630,138	+		CCNA_03466	0.63	-0.3
3,630,138	+		CCNA_03466	0.63	+1.5
3,630,146	-		CCNA_03466	0.64	+0.4
3,630,183	-		CCNA_03466	0.68	-0.1
3,630,194	+		CCNA_03466	0.70	-0.5
3,630,194	+		CCNA_03466	0.70	+0.0
3,630,194	+		CCNA_03466	0.70	+0.4
3,630,194	+		CCNA_03466	0.70	+0.8
3,630,202	-		CCNA_03466	0.71	+0.0
3,630,204	+		CCNA_03466	0.71	+1.0
3,630,217	-		CCNA_03466	0.73	+0.2