Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17235 and CA264_17240 are separated by 66 nucleotides CA264_17240 and CA264_17245 are separated by 298 nucleotides
CA264_17235: CA264_17235 - gliding motility lipoprotein GldJ, at 4,009,340 to 4,010,569
_17235
CA264_17240: CA264_17240 - hypothetical protein, at 4,010,636 to 4,011,112
_17240
CA264_17245: CA264_17245 - malate:quinone oxidoreductase, at 4,011,411 to 4,012,925
_17245
Position (kb)
4010
4011
4012 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4009.708 kb on - strand, within CA264_17235 at 4009.708 kb on - strand, within CA264_17235 at 4009.708 kb on - strand, within CA264_17235 at 4009.709 kb on + strand, within CA264_17235 at 4009.769 kb on + strand, within CA264_17235 at 4009.778 kb on + strand, within CA264_17235 at 4009.782 kb on - strand, within CA264_17235 at 4009.785 kb on + strand, within CA264_17235 at 4009.786 kb on - strand, within CA264_17235 at 4009.786 kb on - strand, within CA264_17235 at 4009.989 kb on + strand, within CA264_17235 at 4009.990 kb on - strand, within CA264_17235 at 4010.030 kb on + strand, within CA264_17235 at 4010.030 kb on + strand, within CA264_17235 at 4010.030 kb on + strand, within CA264_17235 at 4010.031 kb on - strand, within CA264_17235 at 4010.060 kb on + strand, within CA264_17235 at 4010.184 kb on - strand, within CA264_17235 at 4010.234 kb on - strand, within CA264_17235 at 4010.238 kb on - strand, within CA264_17235 at 4010.238 kb on - strand, within CA264_17235 at 4010.267 kb on + strand, within CA264_17235 at 4010.268 kb on - strand, within CA264_17235 at 4010.463 kb on + strand at 4010.463 kb on + strand at 4010.464 kb on - strand at 4010.464 kb on - strand at 4010.568 kb on - strand at 4010.578 kb on + strand at 4010.579 kb on - strand at 4010.579 kb on - strand at 4010.583 kb on + strand at 4010.583 kb on + strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.584 kb on - strand at 4010.586 kb on + strand at 4010.588 kb on + strand at 4010.621 kb on - strand at 4010.626 kb on + strand at 4010.626 kb on + strand at 4010.627 kb on - strand at 4010.633 kb on + strand at 4010.633 kb on + strand at 4010.633 kb on + strand at 4010.633 kb on + strand at 4010.633 kb on + strand at 4010.634 kb on - strand at 4010.660 kb on - strand at 4010.660 kb on - strand at 4010.757 kb on + strand, within CA264_17240 at 4010.757 kb on + strand, within CA264_17240 at 4010.757 kb on + strand, within CA264_17240 at 4010.786 kb on - strand, within CA264_17240 at 4010.881 kb on - strand, within CA264_17240 at 4010.944 kb on - strand, within CA264_17240 at 4011.057 kb on + strand, within CA264_17240 at 4011.058 kb on - strand, within CA264_17240 at 4011.062 kb on + strand, within CA264_17240 at 4011.063 kb on - strand, within CA264_17240 at 4011.063 kb on - strand, within CA264_17240 at 4011.117 kb on - strand at 4011.173 kb on - strand at 4011.213 kb on - strand at 4011.234 kb on - strand at 4011.234 kb on - strand at 4011.274 kb on - strand at 4011.280 kb on - strand at 4011.293 kb on + strand at 4011.412 kb on + strand at 4011.452 kb on + strand at 4011.456 kb on - strand at 4011.456 kb on - strand at 4011.456 kb on - strand at 4011.456 kb on - strand at 4011.457 kb on + strand at 4011.457 kb on + strand at 4011.458 kb on - strand at 4011.458 kb on - strand at 4011.458 kb on - strand at 4011.465 kb on + strand at 4011.466 kb on - strand at 4011.466 kb on - strand at 4011.466 kb on - strand at 4011.567 kb on - strand, within CA264_17245 at 4011.597 kb on - strand, within CA264_17245 at 4011.745 kb on - strand, within CA264_17245 at 4011.745 kb on - strand, within CA264_17245 at 4011.899 kb on + strand, within CA264_17245 at 4011.900 kb on - strand, within CA264_17245 at 4012.051 kb on + strand, within CA264_17245 at 4012.051 kb on + strand, within CA264_17245 at 4012.052 kb on - strand, within CA264_17245 at 4012.054 kb on - strand, within CA264_17245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 4,009,708 - CA264_17235 0.30 +0.7 4,009,708 - CA264_17235 0.30 -1.0 4,009,708 - CA264_17235 0.30 +1.0 4,009,709 + CA264_17235 0.30 +0.7 4,009,769 + CA264_17235 0.35 +0.5 4,009,778 + CA264_17235 0.36 +0.5 4,009,782 - CA264_17235 0.36 +0.3 4,009,785 + CA264_17235 0.36 +0.9 4,009,786 - CA264_17235 0.36 +0.6 4,009,786 - CA264_17235 0.36 +0.7 4,009,989 + CA264_17235 0.53 -1.3 4,009,990 - CA264_17235 0.53 -0.4 4,010,030 + CA264_17235 0.56 +0.2 4,010,030 + CA264_17235 0.56 +1.5 4,010,030 + CA264_17235 0.56 -0.3 4,010,031 - CA264_17235 0.56 +0.9 4,010,060 + CA264_17235 0.59 +0.9 4,010,184 - CA264_17235 0.69 +1.5 4,010,234 - CA264_17235 0.73 +1.0 4,010,238 - CA264_17235 0.73 +0.4 4,010,238 - CA264_17235 0.73 +1.5 4,010,267 + CA264_17235 0.75 +0.8 4,010,268 - CA264_17235 0.75 +0.5 4,010,463 + +0.7 4,010,463 + +1.4 4,010,464 - +1.0 4,010,464 - +1.1 4,010,568 - +0.1 4,010,578 + -1.5 4,010,579 - -0.8 4,010,579 - +0.2 4,010,583 + +0.6 4,010,583 + +0.4 4,010,584 - -0.1 4,010,584 - +0.0 4,010,584 - -0.1 4,010,584 - -1.1 4,010,584 - -0.8 4,010,584 - -0.0 4,010,584 - -0.2 4,010,584 - -0.6 4,010,586 + +0.5 4,010,588 + -1.5 4,010,621 - +0.3 4,010,626 + +0.0 4,010,626 + -0.7 4,010,627 - -0.4 4,010,633 + -0.4 4,010,633 + +0.6 4,010,633 + -0.0 4,010,633 + +0.2 4,010,633 + -0.3 4,010,634 - -0.2 4,010,660 - +0.1 4,010,660 - -0.3 4,010,757 + CA264_17240 0.25 -1.2 4,010,757 + CA264_17240 0.25 -0.8 4,010,757 + CA264_17240 0.25 -0.1 4,010,786 - CA264_17240 0.31 -0.2 4,010,881 - CA264_17240 0.51 -1.2 4,010,944 - CA264_17240 0.65 -0.4 4,011,057 + CA264_17240 0.88 -0.4 4,011,058 - CA264_17240 0.88 -1.5 4,011,062 + CA264_17240 0.89 -2.1 4,011,063 - CA264_17240 0.90 +0.4 4,011,063 - CA264_17240 0.90 -0.4 4,011,117 - +1.1 4,011,173 - +0.9 4,011,213 - +0.0 4,011,234 - -0.1 4,011,234 - -0.0 4,011,274 - -0.5 4,011,280 - -0.1 4,011,293 + -1.4 4,011,412 + +1.7 4,011,452 + -0.5 4,011,456 - -0.4 4,011,456 - +0.0 4,011,456 - +0.1 4,011,456 - -1.3 4,011,457 + +0.9 4,011,457 + +0.0 4,011,458 - -0.4 4,011,458 - -0.3 4,011,458 - -0.8 4,011,465 + -0.6 4,011,466 - -0.4 4,011,466 - -0.1 4,011,466 - -0.5 4,011,567 - CA264_17245 0.10 +0.1 4,011,597 - CA264_17245 0.12 +1.5 4,011,745 - CA264_17245 0.22 +0.3 4,011,745 - CA264_17245 0.22 -0.6 4,011,899 + CA264_17245 0.32 -0.1 4,011,900 - CA264_17245 0.32 -0.3 4,012,051 + CA264_17245 0.42 +0.5 4,012,051 + CA264_17245 0.42 +1.9 4,012,052 - CA264_17245 0.42 -0.1 4,012,054 - CA264_17245 0.42 -0.6
Or see this region's nucleotide sequence