Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15245 and CA264_15250 are separated by 11 nucleotides CA264_15250 and CA264_15255 overlap by 4 nucleotides CA264_15255 and CA264_15260 are separated by 39 nucleotides CA264_15260 and CA264_15265 are separated by 108 nucleotides
CA264_15245: CA264_15245 - hypothetical protein, at 3,570,864 to 3,572,252
_15245
CA264_15250: CA264_15250 - cbs domain containing protein, at 3,572,264 to 3,572,929
_15250
CA264_15255: CA264_15255 - alpha/beta hydrolase, at 3,572,926 to 3,573,699
_15255
CA264_15260: CA264_15260 - glutamine amidotransferase, at 3,573,739 to 3,574,320
_15260
CA264_15265: CA264_15265 - colicin v production protein, at 3,574,429 to 3,574,947
_15265
Position (kb)
3572
3573
3574 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3571.939 kb on + strand, within CA264_15245 at 3571.998 kb on - strand, within CA264_15245 at 3571.999 kb on + strand, within CA264_15245 at 3572.005 kb on - strand, within CA264_15245 at 3572.005 kb on - strand, within CA264_15245 at 3572.008 kb on + strand, within CA264_15245 at 3572.227 kb on - strand at 3572.270 kb on - strand at 3572.270 kb on - strand at 3572.270 kb on - strand at 3572.278 kb on - strand at 3572.455 kb on - strand, within CA264_15250 at 3572.455 kb on - strand, within CA264_15250 at 3572.455 kb on - strand, within CA264_15250 at 3572.620 kb on - strand, within CA264_15250 at 3572.689 kb on - strand, within CA264_15250 at 3572.803 kb on - strand, within CA264_15250 at 3572.944 kb on - strand at 3572.944 kb on - strand at 3572.968 kb on + strand at 3573.021 kb on + strand, within CA264_15255 at 3573.021 kb on + strand, within CA264_15255 at 3573.022 kb on - strand, within CA264_15255 at 3573.025 kb on + strand, within CA264_15255 at 3573.087 kb on + strand, within CA264_15255 at 3573.088 kb on - strand, within CA264_15255 at 3573.130 kb on + strand, within CA264_15255 at 3573.131 kb on - strand, within CA264_15255 at 3573.153 kb on + strand, within CA264_15255 at 3573.154 kb on - strand, within CA264_15255 at 3573.157 kb on - strand, within CA264_15255 at 3573.157 kb on - strand, within CA264_15255 at 3573.201 kb on + strand, within CA264_15255 at 3573.226 kb on + strand, within CA264_15255 at 3573.274 kb on - strand, within CA264_15255 at 3573.274 kb on - strand, within CA264_15255 at 3573.297 kb on - strand, within CA264_15255 at 3573.584 kb on - strand, within CA264_15255 at 3573.638 kb on - strand at 3573.658 kb on + strand at 3573.663 kb on - strand at 3573.663 kb on - strand at 3573.663 kb on - strand at 3573.668 kb on + strand at 3573.763 kb on - strand at 3573.771 kb on + strand at 3573.771 kb on + strand at 3573.774 kb on + strand at 3573.775 kb on - strand at 3573.929 kb on - strand, within CA264_15260 at 3574.269 kb on - strand at 3574.269 kb on - strand at 3574.283 kb on + strand at 3574.284 kb on - strand at 3574.287 kb on + strand at 3574.288 kb on - strand at 3574.331 kb on - strand at 3574.334 kb on + strand at 3574.394 kb on - strand at 3574.394 kb on - strand at 3574.481 kb on + strand, within CA264_15265 at 3574.482 kb on - strand, within CA264_15265 at 3574.482 kb on - strand, within CA264_15265 at 3574.503 kb on - strand, within CA264_15265 at 3574.503 kb on - strand, within CA264_15265 at 3574.589 kb on + strand, within CA264_15265 at 3574.589 kb on + strand, within CA264_15265 at 3574.590 kb on - strand, within CA264_15265 at 3574.633 kb on + strand, within CA264_15265 at 3574.634 kb on - strand, within CA264_15265 at 3574.634 kb on - strand, within CA264_15265 at 3574.635 kb on + strand, within CA264_15265 at 3574.636 kb on - strand, within CA264_15265 at 3574.636 kb on - strand, within CA264_15265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 3,571,939 + CA264_15245 0.77 -0.9 3,571,998 - CA264_15245 0.82 +0.2 3,571,999 + CA264_15245 0.82 +0.7 3,572,005 - CA264_15245 0.82 +0.2 3,572,005 - CA264_15245 0.82 -0.3 3,572,008 + CA264_15245 0.82 +0.4 3,572,227 - +0.5 3,572,270 - +0.5 3,572,270 - -0.0 3,572,270 - +0.9 3,572,278 - -0.4 3,572,455 - CA264_15250 0.29 -1.4 3,572,455 - CA264_15250 0.29 -1.3 3,572,455 - CA264_15250 0.29 +0.8 3,572,620 - CA264_15250 0.53 -0.2 3,572,689 - CA264_15250 0.64 -0.0 3,572,803 - CA264_15250 0.81 -0.8 3,572,944 - +0.4 3,572,944 - -0.2 3,572,968 + -1.8 3,573,021 + CA264_15255 0.12 -2.2 3,573,021 + CA264_15255 0.12 -1.2 3,573,022 - CA264_15255 0.12 -1.8 3,573,025 + CA264_15255 0.13 -3.6 3,573,087 + CA264_15255 0.21 -2.0 3,573,088 - CA264_15255 0.21 -2.4 3,573,130 + CA264_15255 0.26 +0.6 3,573,131 - CA264_15255 0.26 -1.3 3,573,153 + CA264_15255 0.29 -2.0 3,573,154 - CA264_15255 0.29 -0.6 3,573,157 - CA264_15255 0.30 -3.7 3,573,157 - CA264_15255 0.30 +1.2 3,573,201 + CA264_15255 0.36 -2.0 3,573,226 + CA264_15255 0.39 -3.5 3,573,274 - CA264_15255 0.45 -2.5 3,573,274 - CA264_15255 0.45 -2.3 3,573,297 - CA264_15255 0.48 -1.6 3,573,584 - CA264_15255 0.85 -2.6 3,573,638 - -2.8 3,573,658 + -0.5 3,573,663 - -0.8 3,573,663 - -2.0 3,573,663 - -0.4 3,573,668 + -2.4 3,573,763 - -0.8 3,573,771 + -0.3 3,573,771 + +0.2 3,573,774 + +0.2 3,573,775 - +0.2 3,573,929 - CA264_15260 0.33 +0.4 3,574,269 - -0.4 3,574,269 - -1.0 3,574,283 + +0.2 3,574,284 - +0.7 3,574,287 + +0.4 3,574,288 - +0.1 3,574,331 - +0.4 3,574,334 + -0.1 3,574,394 - -0.6 3,574,394 - +0.0 3,574,481 + CA264_15265 0.10 +0.9 3,574,482 - CA264_15265 0.10 +1.7 3,574,482 - CA264_15265 0.10 -0.2 3,574,503 - CA264_15265 0.14 +0.4 3,574,503 - CA264_15265 0.14 +0.3 3,574,589 + CA264_15265 0.31 -0.1 3,574,589 + CA264_15265 0.31 +0.4 3,574,590 - CA264_15265 0.31 -0.2 3,574,633 + CA264_15265 0.39 -0.3 3,574,634 - CA264_15265 0.39 +1.1 3,574,634 - CA264_15265 0.39 +0.2 3,574,635 + CA264_15265 0.40 -0.6 3,574,636 - CA264_15265 0.40 -1.4 3,574,636 - CA264_15265 0.40 -0.0
Or see this region's nucleotide sequence