Experiment: m.b. Chlorite 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09360 and CA264_09365 are separated by 55 nucleotides CA264_09365 and CA264_09370 are separated by 163 nucleotides
CA264_09360: CA264_09360 - phosphoglycerate kinase, at 2,187,749 to 2,188,948
_09360
CA264_09365: CA264_09365 - 4-hydroxybutyrate CoA-transferase, at 2,189,004 to 2,190,293
_09365
CA264_09370: CA264_09370 - amidase, at 2,190,457 to 2,192,037
_09370
Position (kb)
2189
2190
2191 Strain fitness (log2 ratio)
-2
-1
0
1 at 2188.418 kb on + strand, within CA264_09360 at 2188.584 kb on + strand, within CA264_09360 at 2188.952 kb on - strand at 2188.990 kb on - strand at 2188.998 kb on + strand at 2188.998 kb on + strand at 2189.002 kb on + strand at 2189.003 kb on - strand at 2189.003 kb on - strand at 2189.015 kb on + strand at 2189.081 kb on - strand at 2189.153 kb on - strand, within CA264_09365 at 2189.176 kb on - strand, within CA264_09365 at 2189.176 kb on - strand, within CA264_09365 at 2189.206 kb on - strand, within CA264_09365 at 2189.226 kb on - strand, within CA264_09365 at 2189.330 kb on + strand, within CA264_09365 at 2189.598 kb on + strand, within CA264_09365 at 2189.599 kb on - strand, within CA264_09365 at 2189.600 kb on + strand, within CA264_09365 at 2189.687 kb on + strand, within CA264_09365 at 2189.699 kb on + strand, within CA264_09365 at 2189.768 kb on + strand, within CA264_09365 at 2189.769 kb on - strand, within CA264_09365 at 2189.769 kb on - strand, within CA264_09365 at 2189.773 kb on - strand, within CA264_09365 at 2189.773 kb on - strand, within CA264_09365 at 2189.874 kb on + strand, within CA264_09365 at 2189.875 kb on - strand, within CA264_09365 at 2189.914 kb on + strand, within CA264_09365 at 2189.998 kb on + strand, within CA264_09365 at 2190.054 kb on - strand, within CA264_09365 at 2190.057 kb on - strand, within CA264_09365 at 2190.153 kb on + strand, within CA264_09365 at 2190.168 kb on + strand at 2190.175 kb on + strand at 2190.175 kb on + strand at 2190.176 kb on - strand at 2190.181 kb on - strand at 2190.181 kb on - strand at 2190.270 kb on + strand at 2190.291 kb on + strand at 2190.292 kb on - strand at 2190.292 kb on - strand at 2190.292 kb on - strand at 2190.343 kb on - strand at 2190.351 kb on + strand at 2190.462 kb on + strand at 2190.463 kb on - strand at 2190.463 kb on - strand at 2190.470 kb on - strand at 2190.472 kb on - strand at 2190.518 kb on - strand at 2190.576 kb on + strand at 2190.791 kb on + strand, within CA264_09370 at 2190.802 kb on + strand, within CA264_09370 at 2190.803 kb on - strand, within CA264_09370 at 2190.803 kb on - strand, within CA264_09370 at 2190.963 kb on + strand, within CA264_09370 at 2190.964 kb on - strand, within CA264_09370 at 2191.023 kb on + strand, within CA264_09370 at 2191.078 kb on - strand, within CA264_09370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.2 mM remove 2,188,418 + CA264_09360 0.56 -2.3 2,188,584 + CA264_09360 0.70 -1.3 2,188,952 - -0.0 2,188,990 - -0.2 2,188,998 + +0.3 2,188,998 + +0.3 2,189,002 + -1.9 2,189,003 - -0.1 2,189,003 - -0.1 2,189,015 + -0.3 2,189,081 - +1.1 2,189,153 - CA264_09365 0.12 -1.7 2,189,176 - CA264_09365 0.13 -1.8 2,189,176 - CA264_09365 0.13 -2.0 2,189,206 - CA264_09365 0.16 -1.0 2,189,226 - CA264_09365 0.17 -1.2 2,189,330 + CA264_09365 0.25 -1.0 2,189,598 + CA264_09365 0.46 -1.8 2,189,599 - CA264_09365 0.46 -1.6 2,189,600 + CA264_09365 0.46 -1.5 2,189,687 + CA264_09365 0.53 -1.2 2,189,699 + CA264_09365 0.54 -1.3 2,189,768 + CA264_09365 0.59 -0.3 2,189,769 - CA264_09365 0.59 -2.0 2,189,769 - CA264_09365 0.59 -1.0 2,189,773 - CA264_09365 0.60 -1.4 2,189,773 - CA264_09365 0.60 -1.9 2,189,874 + CA264_09365 0.67 -2.1 2,189,875 - CA264_09365 0.68 -1.0 2,189,914 + CA264_09365 0.71 +0.7 2,189,998 + CA264_09365 0.77 -2.5 2,190,054 - CA264_09365 0.81 -1.3 2,190,057 - CA264_09365 0.82 -0.4 2,190,153 + CA264_09365 0.89 -0.5 2,190,168 + -2.4 2,190,175 + -1.4 2,190,175 + -2.2 2,190,176 - +0.3 2,190,181 - -2.3 2,190,181 - -1.3 2,190,270 + +0.2 2,190,291 + -0.8 2,190,292 - -0.6 2,190,292 - -1.3 2,190,292 - -0.3 2,190,343 - -0.4 2,190,351 + -0.8 2,190,462 + -0.5 2,190,463 - -0.1 2,190,463 - +0.3 2,190,470 - -0.2 2,190,472 - +0.3 2,190,518 - -1.3 2,190,576 + +0.7 2,190,791 + CA264_09370 0.21 -0.2 2,190,802 + CA264_09370 0.22 -0.9 2,190,803 - CA264_09370 0.22 +0.1 2,190,803 - CA264_09370 0.22 +1.3 2,190,963 + CA264_09370 0.32 +0.5 2,190,964 - CA264_09370 0.32 -0.8 2,191,023 + CA264_09370 0.36 -1.2 2,191,078 - CA264_09370 0.39 -0.9
Or see this region's nucleotide sequence