Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09925 and CA264_09930 are separated by 53 nucleotides CA264_09930 and CA264_09935 are separated by 37 nucleotides CA264_09935 and CA264_09940 are separated by 54 nucleotides
CA264_09925: CA264_09925 - hypothetical protein, at 2,313,157 to 2,313,462
_09925
CA264_09930: CA264_09930 - hypothetical protein, at 2,313,516 to 2,314,304
_09930
CA264_09935: CA264_09935 - conjugative transposon protein TraN, at 2,314,342 to 2,315,187
_09935
CA264_09940: CA264_09940 - conjugative transposon protein TraM, at 2,315,242 to 2,316,486
_09940
Position (kb)
2314
2315
2316 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2313.419 kb on - strand, within CA264_09925 at 2313.419 kb on - strand, within CA264_09925 at 2313.419 kb on - strand, within CA264_09925 at 2313.481 kb on - strand at 2313.692 kb on + strand, within CA264_09930 at 2313.692 kb on + strand, within CA264_09930 at 2313.692 kb on + strand, within CA264_09930 at 2313.694 kb on + strand, within CA264_09930 at 2313.694 kb on + strand, within CA264_09930 at 2313.741 kb on + strand, within CA264_09930 at 2313.741 kb on + strand, within CA264_09930 at 2313.865 kb on + strand, within CA264_09930 at 2313.865 kb on + strand, within CA264_09930 at 2313.866 kb on - strand, within CA264_09930 at 2313.893 kb on - strand, within CA264_09930 at 2313.943 kb on + strand, within CA264_09930 at 2313.944 kb on - strand, within CA264_09930 at 2314.004 kb on - strand, within CA264_09930 at 2314.022 kb on + strand, within CA264_09930 at 2314.023 kb on - strand, within CA264_09930 at 2314.023 kb on - strand, within CA264_09930 at 2314.023 kb on - strand, within CA264_09930 at 2314.042 kb on + strand, within CA264_09930 at 2314.166 kb on + strand, within CA264_09930 at 2314.172 kb on - strand, within CA264_09930 at 2314.172 kb on - strand, within CA264_09930 at 2314.172 kb on - strand, within CA264_09930 at 2314.261 kb on + strand at 2314.261 kb on + strand at 2314.283 kb on - strand at 2314.330 kb on + strand at 2314.331 kb on - strand at 2314.331 kb on - strand at 2314.348 kb on + strand at 2314.349 kb on - strand at 2314.396 kb on - strand at 2314.471 kb on - strand, within CA264_09935 at 2314.501 kb on - strand, within CA264_09935 at 2314.532 kb on + strand, within CA264_09935 at 2314.532 kb on + strand, within CA264_09935 at 2314.595 kb on + strand, within CA264_09935 at 2314.595 kb on + strand, within CA264_09935 at 2314.595 kb on + strand, within CA264_09935 at 2314.596 kb on - strand, within CA264_09935 at 2314.617 kb on + strand, within CA264_09935 at 2315.017 kb on + strand, within CA264_09935 at 2315.145 kb on + strand at 2315.212 kb on + strand at 2315.213 kb on - strand at 2315.213 kb on - strand at 2315.214 kb on + strand at 2315.215 kb on - strand at 2315.215 kb on - strand at 2315.244 kb on - strand at 2315.460 kb on - strand, within CA264_09940 at 2315.460 kb on - strand, within CA264_09940 at 2315.529 kb on + strand, within CA264_09940 at 2315.529 kb on + strand, within CA264_09940 at 2315.621 kb on - strand, within CA264_09940 at 2315.786 kb on - strand, within CA264_09940 at 2315.794 kb on + strand, within CA264_09940 at 2315.998 kb on + strand, within CA264_09940 at 2316.098 kb on + strand, within CA264_09940 at 2316.099 kb on - strand, within CA264_09940 at 2316.099 kb on - strand, within CA264_09940
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,313,419 - CA264_09925 0.86 -0.0 2,313,419 - CA264_09925 0.86 +0.3 2,313,419 - CA264_09925 0.86 -0.6 2,313,481 - +1.6 2,313,692 + CA264_09930 0.22 -0.9 2,313,692 + CA264_09930 0.22 -1.0 2,313,692 + CA264_09930 0.22 -1.2 2,313,694 + CA264_09930 0.23 -0.4 2,313,694 + CA264_09930 0.23 -1.1 2,313,741 + CA264_09930 0.29 -0.5 2,313,741 + CA264_09930 0.29 +0.1 2,313,865 + CA264_09930 0.44 -1.3 2,313,865 + CA264_09930 0.44 +1.0 2,313,866 - CA264_09930 0.44 +0.6 2,313,893 - CA264_09930 0.48 -1.1 2,313,943 + CA264_09930 0.54 -0.6 2,313,944 - CA264_09930 0.54 -0.2 2,314,004 - CA264_09930 0.62 +0.1 2,314,022 + CA264_09930 0.64 +0.0 2,314,023 - CA264_09930 0.64 -1.0 2,314,023 - CA264_09930 0.64 +0.0 2,314,023 - CA264_09930 0.64 +0.1 2,314,042 + CA264_09930 0.67 -0.4 2,314,166 + CA264_09930 0.82 +1.2 2,314,172 - CA264_09930 0.83 -0.6 2,314,172 - CA264_09930 0.83 +0.1 2,314,172 - CA264_09930 0.83 +1.2 2,314,261 + -1.0 2,314,261 + +0.7 2,314,283 - +0.0 2,314,330 + -0.6 2,314,331 - +0.2 2,314,331 - -0.6 2,314,348 + -1.5 2,314,349 - -0.8 2,314,396 - -0.1 2,314,471 - CA264_09935 0.15 -2.1 2,314,501 - CA264_09935 0.19 -1.3 2,314,532 + CA264_09935 0.22 -0.5 2,314,532 + CA264_09935 0.22 +0.2 2,314,595 + CA264_09935 0.30 +1.5 2,314,595 + CA264_09935 0.30 -0.9 2,314,595 + CA264_09935 0.30 +0.6 2,314,596 - CA264_09935 0.30 -1.3 2,314,617 + CA264_09935 0.33 -0.4 2,315,017 + CA264_09935 0.80 +0.3 2,315,145 + +0.6 2,315,212 + -0.1 2,315,213 - +0.8 2,315,213 - -0.9 2,315,214 + +2.0 2,315,215 - -0.4 2,315,215 - -1.0 2,315,244 - -0.2 2,315,460 - CA264_09940 0.18 +0.5 2,315,460 - CA264_09940 0.18 +0.8 2,315,529 + CA264_09940 0.23 -0.9 2,315,529 + CA264_09940 0.23 -0.4 2,315,621 - CA264_09940 0.30 -0.1 2,315,786 - CA264_09940 0.44 +0.6 2,315,794 + CA264_09940 0.44 +1.2 2,315,998 + CA264_09940 0.61 +0.3 2,316,098 + CA264_09940 0.69 +0.2 2,316,099 - CA264_09940 0.69 +1.1 2,316,099 - CA264_09940 0.69 -0.7
Or see this region's nucleotide sequence