Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09165 and CA264_09170 are separated by 168 nucleotides CA264_09170 and CA264_09175 are separated by 1 nucleotides CA264_09175 and CA264_09180 are separated by 143 nucleotides
CA264_09165: CA264_09165 - AraC family transcriptional regulator, at 2,148,750 to 2,149,328
_09165
CA264_09170: CA264_09170 - hypothetical protein, at 2,149,497 to 2,149,922
_09170
CA264_09175: CA264_09175 - nuclease PIN, at 2,149,924 to 2,150,787
_09175
CA264_09180: CA264_09180 - DNA-binding response regulator, at 2,150,931 to 2,151,581
_09180
Position (kb)
2149
2150
2151 Strain fitness (log2 ratio)
-2
-1
0
1 at 2148.953 kb on - strand, within CA264_09165 at 2148.998 kb on + strand, within CA264_09165 at 2148.999 kb on - strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.007 kb on - strand, within CA264_09165 at 2149.033 kb on + strand, within CA264_09165 at 2149.257 kb on + strand, within CA264_09165 at 2149.258 kb on - strand, within CA264_09165 at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.381 kb on + strand at 2149.412 kb on - strand at 2149.462 kb on - strand at 2149.463 kb on + strand at 2149.463 kb on + strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.473 kb on + strand at 2149.478 kb on - strand at 2149.492 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.518 kb on - strand at 2149.518 kb on - strand at 2149.550 kb on - strand, within CA264_09170 at 2149.633 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.650 kb on - strand, within CA264_09170 at 2149.802 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.825 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.885 kb on + strand at 2149.885 kb on + strand at 2149.885 kb on + strand at 2149.921 kb on - strand at 2149.940 kb on - strand at 2149.981 kb on - strand at 2150.092 kb on - strand, within CA264_09175 at 2150.153 kb on - strand, within CA264_09175 at 2150.192 kb on + strand, within CA264_09175 at 2150.233 kb on + strand, within CA264_09175 at 2150.369 kb on + strand, within CA264_09175 at 2150.391 kb on + strand, within CA264_09175 at 2150.519 kb on + strand, within CA264_09175 at 2150.794 kb on + strand at 2150.795 kb on - strand at 2150.795 kb on - strand at 2150.795 kb on - strand at 2150.803 kb on + strand at 2150.804 kb on - strand at 2150.821 kb on + strand at 2150.821 kb on + strand at 2150.832 kb on - strand at 2150.832 kb on - strand at 2150.832 kb on - strand at 2150.895 kb on + strand at 2150.896 kb on - strand at 2150.928 kb on - strand at 2150.932 kb on + strand at 2151.072 kb on - strand, within CA264_09180 at 2151.072 kb on - strand, within CA264_09180 at 2151.074 kb on - strand, within CA264_09180 at 2151.162 kb on - strand, within CA264_09180 at 2151.163 kb on + strand, within CA264_09180 at 2151.164 kb on - strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.208 kb on + strand, within CA264_09180 at 2151.209 kb on - strand, within CA264_09180 at 2151.313 kb on + strand, within CA264_09180 at 2151.313 kb on + strand, within CA264_09180 at 2151.314 kb on - strand, within CA264_09180 at 2151.314 kb on - strand, within CA264_09180 at 2151.346 kb on - strand, within CA264_09180 at 2151.351 kb on + strand, within CA264_09180 at 2151.352 kb on - strand, within CA264_09180 at 2151.352 kb on - strand, within CA264_09180 at 2151.429 kb on + strand, within CA264_09180 at 2151.430 kb on - strand, within CA264_09180 at 2151.499 kb on - strand, within CA264_09180 at 2151.499 kb on - strand, within CA264_09180 at 2151.576 kb on - strand at 2151.581 kb on + strand at 2151.593 kb on + strand at 2151.594 kb on - strand at 2151.594 kb on - strand at 2151.624 kb on - strand at 2151.627 kb on - strand at 2151.765 kb on - strand at 2151.767 kb on - strand at 2151.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,148,953 - CA264_09165 0.35 -0.3 2,148,998 + CA264_09165 0.43 -0.6 2,148,999 - CA264_09165 0.43 +1.7 2,149,000 + CA264_09165 0.43 +1.5 2,149,000 + CA264_09165 0.43 -0.8 2,149,000 + CA264_09165 0.43 -1.6 2,149,001 - CA264_09165 0.43 -0.5 2,149,001 - CA264_09165 0.43 -0.6 2,149,001 - CA264_09165 0.43 +1.0 2,149,004 + CA264_09165 0.44 +0.0 2,149,004 + CA264_09165 0.44 +0.8 2,149,004 + CA264_09165 0.44 -0.2 2,149,007 - CA264_09165 0.44 -0.5 2,149,033 + CA264_09165 0.49 -0.3 2,149,257 + CA264_09165 0.88 +0.4 2,149,258 - CA264_09165 0.88 +0.1 2,149,356 + -0.5 2,149,356 + +1.1 2,149,356 + +0.0 2,149,381 + -0.9 2,149,412 - +0.1 2,149,462 - -0.4 2,149,463 + +0.2 2,149,463 + +0.4 2,149,464 - -0.3 2,149,464 - -0.1 2,149,464 - -1.4 2,149,473 + +0.4 2,149,478 - +0.3 2,149,492 + -0.7 2,149,517 + -0.3 2,149,517 + +0.1 2,149,517 + -0.1 2,149,518 - -0.2 2,149,518 - -0.1 2,149,550 - CA264_09170 0.12 -0.1 2,149,633 - CA264_09170 0.32 -0.5 2,149,637 - CA264_09170 0.33 -2.1 2,149,637 - CA264_09170 0.33 +0.7 2,149,637 - CA264_09170 0.33 -0.1 2,149,650 - CA264_09170 0.36 -0.4 2,149,802 + CA264_09170 0.72 +0.0 2,149,806 + CA264_09170 0.73 -1.8 2,149,806 + CA264_09170 0.73 +0.5 2,149,806 + CA264_09170 0.73 +0.2 2,149,807 - CA264_09170 0.73 -1.2 2,149,807 - CA264_09170 0.73 +0.5 2,149,807 - CA264_09170 0.73 +0.9 2,149,825 + CA264_09170 0.77 +0.4 2,149,828 + CA264_09170 0.78 +0.3 2,149,828 + CA264_09170 0.78 -0.0 2,149,828 + CA264_09170 0.78 +0.4 2,149,885 + -0.9 2,149,885 + -0.8 2,149,885 + -0.4 2,149,921 - -0.4 2,149,940 - +0.5 2,149,981 - -0.0 2,150,092 - CA264_09175 0.19 -1.0 2,150,153 - CA264_09175 0.27 -0.5 2,150,192 + CA264_09175 0.31 -0.5 2,150,233 + CA264_09175 0.36 -0.6 2,150,369 + CA264_09175 0.52 -0.4 2,150,391 + CA264_09175 0.54 -1.2 2,150,519 + CA264_09175 0.69 -0.2 2,150,794 + -0.0 2,150,795 - +0.7 2,150,795 - +0.1 2,150,795 - -0.5 2,150,803 + -0.2 2,150,804 - -1.0 2,150,821 + +0.5 2,150,821 + -0.4 2,150,832 - +0.3 2,150,832 - +0.1 2,150,832 - -0.3 2,150,895 + +0.1 2,150,896 - +0.2 2,150,928 - -0.5 2,150,932 + +1.3 2,151,072 - CA264_09180 0.22 -0.1 2,151,072 - CA264_09180 0.22 +0.4 2,151,074 - CA264_09180 0.22 +0.1 2,151,162 - CA264_09180 0.35 +1.5 2,151,163 + CA264_09180 0.36 -1.1 2,151,164 - CA264_09180 0.36 -0.3 2,151,208 + CA264_09180 0.43 +0.9 2,151,208 + CA264_09180 0.43 -0.6 2,151,208 + CA264_09180 0.43 +0.0 2,151,209 - CA264_09180 0.43 +0.7 2,151,313 + CA264_09180 0.59 +0.1 2,151,313 + CA264_09180 0.59 +0.1 2,151,314 - CA264_09180 0.59 +0.0 2,151,314 - CA264_09180 0.59 +0.4 2,151,346 - CA264_09180 0.64 +0.2 2,151,351 + CA264_09180 0.65 -0.3 2,151,352 - CA264_09180 0.65 +0.2 2,151,352 - CA264_09180 0.65 -0.6 2,151,429 + CA264_09180 0.76 -0.0 2,151,430 - CA264_09180 0.77 -0.2 2,151,499 - CA264_09180 0.87 +0.6 2,151,499 - CA264_09180 0.87 +0.3 2,151,576 - -1.3 2,151,581 + +0.6 2,151,593 + +0.6 2,151,594 - -1.3 2,151,594 - -0.0 2,151,624 - +0.7 2,151,627 - +0.0 2,151,765 - +0.2 2,151,767 - +0.1 2,151,776 + -0.7
Or see this region's nucleotide sequence