Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS29425 and ABID97_RS29430 are separated by 149 nucleotides ABID97_RS29430 and ABID97_RS29435 are separated by 70 nucleotides ABID97_RS29435 and ABID97_RS29440 are separated by 13 nucleotides
ABID97_RS29425: ABID97_RS29425 - LysR family transcriptional regulator, at 808,474 to 809,388
_RS29425
ABID97_RS29430: ABID97_RS29430 - GMC family oxidoreductase N-terminal domain-containing protein, at 809,538 to 811,139
_RS29430
ABID97_RS29435: ABID97_RS29435 - SDR family oxidoreductase, at 811,210 to 812,016
_RS29435
ABID97_RS29440: ABID97_RS29440 - MoaF C-terminal domain-containing protein, at 812,030 to 812,830
_RS29440
Position (kb) 809
810
811
812 Strain fitness (log2 ratio) -1
0
1 at 808.864 kb on + strand, within ABID97_RS29425 at 809.201 kb on - strand, within ABID97_RS29425 at 809.820 kb on + strand, within ABID97_RS29430 at 809.820 kb on + strand, within ABID97_RS29430 at 809.844 kb on + strand, within ABID97_RS29430 at 810.135 kb on + strand, within ABID97_RS29430 at 810.136 kb on - strand, within ABID97_RS29430 at 810.919 kb on - strand, within ABID97_RS29430 at 811.179 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 808,864 + ABID97_RS29425 0.43 +0.2 809,201 - ABID97_RS29425 0.79 -0.8 809,820 + ABID97_RS29430 0.18 +0.2 809,820 + ABID97_RS29430 0.18 -0.1 809,844 + ABID97_RS29430 0.19 -0.1 810,135 + ABID97_RS29430 0.37 +0.5 810,136 - ABID97_RS29430 0.37 +0.1 810,919 - ABID97_RS29430 0.86 -1.2 811,179 + +0.3
Or see this region's nucleotide sequence