Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS16815

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
3,351,691	-		ABIE40_RS16810	0.43	-4.7
3,351,691	-		ABIE40_RS16810	0.43	-3.3
3,351,709	-		ABIE40_RS16810	0.44	-4.4
3,351,714	+		ABIE40_RS16810	0.45	-4.2
3,351,714	+		ABIE40_RS16810	0.45	-2.4
3,351,715	-		ABIE40_RS16810	0.45	-4.8
3,351,786	+		ABIE40_RS16810	0.50	-4.1
3,351,786	+		ABIE40_RS16810	0.50	-3.8
3,351,786	+		ABIE40_RS16810	0.50	-2.3
3,351,787	-		ABIE40_RS16810	0.50	-2.1
3,351,787	-		ABIE40_RS16810	0.50	-3.2
3,351,888	+		ABIE40_RS16810	0.58	-2.6
3,351,888	+		ABIE40_RS16810	0.58	-0.1
3,351,888	+		ABIE40_RS16810	0.58	-3.3
3,351,888	+		ABIE40_RS16810	0.58	-2.9
3,351,888	+		ABIE40_RS16810	0.58	-0.6
3,351,889	-		ABIE40_RS16810	0.58	-4.3
3,351,889	-		ABIE40_RS16810	0.58	-1.8
3,351,889	-		ABIE40_RS16810	0.58	-2.5
3,351,889	-		ABIE40_RS16810	0.58	-4.3
3,351,889	-		ABIE40_RS16810	0.58	-3.9
3,351,889	-		ABIE40_RS16810	0.58	-4.2
3,351,889	-		ABIE40_RS16810	0.58	-1.5
3,351,889	-		ABIE40_RS16810	0.58	-3.0
3,351,889	-		ABIE40_RS16810	0.58	-2.7
3,351,889	-		ABIE40_RS16810	0.58	-3.6
3,351,993	+		ABIE40_RS16810	0.66	-2.6
3,351,993	+		ABIE40_RS16810	0.66	-4.2
3,351,994	-		ABIE40_RS16810	0.66	-2.8
3,351,994	-		ABIE40_RS16810	0.66	-1.1
3,352,068	+		ABIE40_RS16810	0.72	-4.1
3,352,069	-		ABIE40_RS16810	0.72	-4.3
3,352,069	-		ABIE40_RS16810	0.72	-3.9
3,352,149	+		ABIE40_RS16810	0.78	-4.1
3,352,149	+		ABIE40_RS16810	0.78	-3.7
3,352,149	+		ABIE40_RS16810	0.78	-2.3
3,352,149	+		ABIE40_RS16810	0.78	-3.5
3,352,149	+		ABIE40_RS16810	0.78	-5.1
3,352,149	+		ABIE40_RS16810	0.78	-3.5
3,352,150	-		ABIE40_RS16810	0.78	-3.2
3,352,150	-		ABIE40_RS16810	0.78	-2.6
3,352,150	-		ABIE40_RS16810	0.78	-5.3
3,352,150	-		ABIE40_RS16810	0.78	-5.5
3,352,152	+		ABIE40_RS16810	0.78	-5.9
3,352,152	+		ABIE40_RS16810	0.78	-2.1
3,352,153	-		ABIE40_RS16810	0.78	-5.7
3,352,153	-		ABIE40_RS16810	0.78	-2.5
3,352,153	-		ABIE40_RS16810	0.78	-0.6
3,352,153	-		ABIE40_RS16810	0.78	-2.5
3,352,294	-		ABIE40_RS16810	0.89	-2.2
3,352,294	-		ABIE40_RS16810	0.89	-4.2
3,352,356	+				-3.1
3,352,357	-				-2.1
3,352,357	-				-4.1
3,352,398	+				-4.2
3,352,399	-				-4.0
3,352,399	-				-3.9
3,352,399	-				-2.3
3,352,399	-				-3.2
3,352,399	-				-4.0
3,352,399	-				-4.2
3,352,399	-				-5.1
3,352,399	-				-3.6
3,352,399	-				-0.5
3,352,668	+				-3.1
3,352,668	+				-3.5
3,352,668	+				-1.8
3,352,668	+				-3.4
3,352,668	+				-0.8
3,352,669	-				-2.2
3,352,669	-				-1.1
3,352,669	-				-3.2
3,352,669	-				-2.3
3,352,680	+				-2.1
3,352,681	-				-1.7
3,352,681	-				+1.5
3,352,700	-				-2.7
3,352,870	-		ABIE40_RS16815	0.17	-4.9
3,353,025	+		ABIE40_RS16815	0.28	-4.5
3,353,059	+		ABIE40_RS16815	0.30	-3.3
3,353,059	+		ABIE40_RS16815	0.30	-6.0
3,353,060	-		ABIE40_RS16815	0.30	-3.6
3,353,076	+		ABIE40_RS16815	0.31	-1.7
3,353,076	+		ABIE40_RS16815	0.31	-3.3
3,353,076	+		ABIE40_RS16815	0.31	-2.4
3,353,076	+		ABIE40_RS16815	0.31	-1.5
3,353,076	+		ABIE40_RS16815	0.31	-4.4
3,353,076	+		ABIE40_RS16815	0.31	-0.1
3,353,077	-		ABIE40_RS16815	0.31	-3.0
3,353,272	-		ABIE40_RS16815	0.45	-2.8
3,353,342	-		ABIE40_RS16815	0.50	-2.1
3,353,416	+		ABIE40_RS16815	0.55	-3.7
3,353,416	+		ABIE40_RS16815	0.55	-3.2
3,353,456	-		ABIE40_RS16815	0.58	-3.1
3,353,551	+		ABIE40_RS16815	0.64	-5.0
3,353,552	-		ABIE40_RS16815	0.64	-1.8
3,353,578	+		ABIE40_RS16815	0.66	-5.1
3,353,578	+		ABIE40_RS16815	0.66	-2.8
3,353,578	+		ABIE40_RS16815	0.66	-4.2
3,353,579	-		ABIE40_RS16815	0.66	-1.1
3,353,607	+		ABIE40_RS16815	0.68	-4.7
3,353,607	+		ABIE40_RS16815	0.68	-4.5
3,353,607	+		ABIE40_RS16815	0.68	-3.0
3,353,608	-		ABIE40_RS16815	0.68	-2.5
3,353,608	-		ABIE40_RS16815	0.68	-2.8
3,353,608	-		ABIE40_RS16815	0.68	-3.5
3,353,763	+		ABIE40_RS16815	0.79	-3.1
3,353,763	+		ABIE40_RS16815	0.79	-4.0
3,353,763	+		ABIE40_RS16815	0.79	-2.3
3,353,763	+		ABIE40_RS16815	0.79	-5.0
3,353,763	+		ABIE40_RS16815	0.79	-3.2
3,353,763	+		ABIE40_RS16815	0.79	-1.5
3,353,764	-		ABIE40_RS16815	0.79	-1.1
3,353,764	-		ABIE40_RS16815	0.79	-4.9
3,353,764	-		ABIE40_RS16815	0.79	-3.8
3,353,764	-		ABIE40_RS16815	0.79	-2.7
3,353,764	-		ABIE40_RS16815	0.79	-5.2
3,353,764	-		ABIE40_RS16815	0.79	-2.1
3,353,764	-		ABIE40_RS16815	0.79	-1.2
3,353,764	-		ABIE40_RS16815	0.79	-1.3
3,353,764	-		ABIE40_RS16815	0.79	-1.5
3,353,764	-		ABIE40_RS16815	0.79	-2.4
3,353,773	+		ABIE40_RS16815	0.79	-3.2
3,353,773	+		ABIE40_RS16815	0.79	-2.9
3,354,069	+				-3.1
3,354,069	+				-4.2
3,354,069	+				-4.2
3,354,069	+				-1.7
3,354,069	+				-3.0
3,354,069	+				-2.2
3,354,069	+				-3.1
3,354,069	+				-5.4
3,354,069	+				-3.9
3,354,070	-				-5.2
3,354,070	-				-3.6
3,354,070	-				-4.5
3,354,070	-				-2.3
3,354,070	-				-0.1
3,354,070	-				-4.3
3,354,070	-				-4.4
3,354,070	-				-3.0
3,354,070	-				-2.0
3,354,070	-				-4.1
3,354,262	+		ABIE40_RS16820	0.17	-3.2
3,354,360	+		ABIE40_RS16820	0.26	-5.0
3,354,360	+		ABIE40_RS16820	0.26	-2.9
3,354,360	+		ABIE40_RS16820	0.26	-3.8
3,354,361	-		ABIE40_RS16820	0.26	-0.5
3,354,361	-		ABIE40_RS16820	0.26	-0.3
3,354,361	-		ABIE40_RS16820	0.26	-0.1
3,354,361	-		ABIE40_RS16820	0.26	-1.1
3,354,361	-		ABIE40_RS16820	0.26	-0.3
3,354,361	-		ABIE40_RS16820	0.26	+0.7
3,354,361	-		ABIE40_RS16820	0.26	-1.8
3,354,361	-		ABIE40_RS16820	0.26	-1.7
3,354,362	+		ABIE40_RS16820	0.26	-2.2
3,354,363	-		ABIE40_RS16820	0.26	+0.0
3,354,363	-		ABIE40_RS16820	0.26	-0.7
3,354,409	+		ABIE40_RS16820	0.31	-3.6
3,354,409	+		ABIE40_RS16820	0.31	-3.3
3,354,409	+		ABIE40_RS16820	0.31	-2.2
3,354,409	+		ABIE40_RS16820	0.31	-2.3
3,354,410	-		ABIE40_RS16820	0.31	-1.7
3,354,410	-		ABIE40_RS16820	0.31	-1.4
3,354,410	-		ABIE40_RS16820	0.31	-2.5
3,354,630	+		ABIE40_RS16820	0.52	-3.5
3,354,630	+		ABIE40_RS16820	0.52	-1.5
3,354,630	+		ABIE40_RS16820	0.52	-2.8
3,354,631	-		ABIE40_RS16820	0.53	-1.6
3,354,631	-		ABIE40_RS16820	0.53	-2.7
3,354,631	-		ABIE40_RS16820	0.53	-2.8
3,354,981	+		ABIE40_RS16820	0.87	-1.5
3,354,981	+		ABIE40_RS16820	0.87	-3.3
3,354,981	+		ABIE40_RS16820	0.87	-4.3
3,354,981	+		ABIE40_RS16820	0.87	-1.5
3,354,981	+		ABIE40_RS16820	0.87	-1.7
3,354,982	-		ABIE40_RS16820	0.87	-6.3