Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS00955 and ABIE40_RS00960 are separated by 95 nucleotides ABIE40_RS00960 and ABIE40_RS00965 are separated by 211 nucleotides
ABIE40_RS00955: ABIE40_RS00955 - aminotransferase, at 196,252 to 199,179
_RS00955
ABIE40_RS00960: ABIE40_RS00960 - formyltetrahydrofolate deformylase, at 199,275 to 200,159
_RS00960
ABIE40_RS00965: ABIE40_RS00965 - hypothetical protein, at 200,371 to 201,618
_RS00965
Position (kb) 199
200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 198.356 kb on + strand, within ABIE40_RS00955 at 198.356 kb on + strand, within ABIE40_RS00955 at 198.357 kb on - strand, within ABIE40_RS00955 at 198.357 kb on - strand, within ABIE40_RS00955 at 198.378 kb on + strand, within ABIE40_RS00955 at 198.378 kb on + strand, within ABIE40_RS00955 at 198.378 kb on + strand, within ABIE40_RS00955 at 198.379 kb on - strand, within ABIE40_RS00955 at 198.379 kb on - strand, within ABIE40_RS00955 at 198.379 kb on - strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.380 kb on + strand, within ABIE40_RS00955 at 198.381 kb on - strand, within ABIE40_RS00955 at 198.381 kb on - strand, within ABIE40_RS00955 at 198.616 kb on + strand, within ABIE40_RS00955 at 198.616 kb on + strand, within ABIE40_RS00955 at 198.617 kb on - strand, within ABIE40_RS00955 at 198.618 kb on + strand, within ABIE40_RS00955 at 198.619 kb on - strand, within ABIE40_RS00955 at 198.619 kb on - strand, within ABIE40_RS00955 at 198.619 kb on - strand, within ABIE40_RS00955 at 198.619 kb on - strand, within ABIE40_RS00955 at 198.827 kb on + strand, within ABIE40_RS00955 at 198.828 kb on - strand, within ABIE40_RS00955 at 198.828 kb on - strand, within ABIE40_RS00955 at 198.848 kb on + strand, within ABIE40_RS00955 at 198.848 kb on + strand, within ABIE40_RS00955 at 198.848 kb on + strand, within ABIE40_RS00955 at 198.848 kb on + strand, within ABIE40_RS00955 at 198.848 kb on + strand, within ABIE40_RS00955 at 198.849 kb on - strand, within ABIE40_RS00955 at 198.849 kb on - strand, within ABIE40_RS00955 at 198.863 kb on - strand, within ABIE40_RS00955 at 198.937 kb on - strand at 198.937 kb on - strand at 198.987 kb on - strand at 199.091 kb on + strand at 199.091 kb on + strand at 199.092 kb on - strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.111 kb on + strand at 199.112 kb on - strand at 199.112 kb on - strand at 199.112 kb on - strand at 199.153 kb on - strand at 199.153 kb on - strand at 199.205 kb on + strand at 199.206 kb on - strand at 199.214 kb on + strand at 199.215 kb on - strand at 199.227 kb on - strand at 199.237 kb on + strand at 199.237 kb on + strand at 199.249 kb on + strand at 199.249 kb on + strand at 199.250 kb on - strand at 199.283 kb on + strand at 199.283 kb on + strand at 199.283 kb on + strand at 199.283 kb on + strand at 199.284 kb on - strand at 199.284 kb on - strand at 199.297 kb on + strand at 199.297 kb on + strand at 199.297 kb on + strand at 199.298 kb on - strand at 199.298 kb on - strand at 199.298 kb on - strand at 199.298 kb on - strand at 199.298 kb on - strand at 199.328 kb on + strand at 199.362 kb on - strand at 199.420 kb on + strand, within ABIE40_RS00960 at 199.421 kb on - strand, within ABIE40_RS00960 at 199.421 kb on - strand, within ABIE40_RS00960 at 199.501 kb on + strand, within ABIE40_RS00960 at 199.501 kb on + strand, within ABIE40_RS00960 at 199.502 kb on - strand, within ABIE40_RS00960 at 199.540 kb on + strand, within ABIE40_RS00960 at 199.553 kb on - strand, within ABIE40_RS00960 at 199.652 kb on - strand, within ABIE40_RS00960 at 199.652 kb on - strand, within ABIE40_RS00960 at 199.786 kb on + strand, within ABIE40_RS00960 at 200.092 kb on + strand at 200.136 kb on + strand at 200.136 kb on + strand at 200.136 kb on + strand at 200.137 kb on - strand at 200.137 kb on - strand at 200.149 kb on + strand at 200.149 kb on + strand at 200.198 kb on + strand at 200.198 kb on + strand at 200.198 kb on + strand at 200.198 kb on + strand at 200.199 kb on - strand at 200.199 kb on - strand at 200.199 kb on - strand at 200.305 kb on + strand at 200.305 kb on + strand at 200.305 kb on + strand at 200.306 kb on - strand at 200.306 kb on - strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.307 kb on + strand at 200.308 kb on - strand at 200.308 kb on - strand at 200.308 kb on - strand at 200.308 kb on - strand at 200.308 kb on - strand at 200.308 kb on - strand at 200.317 kb on + strand at 200.317 kb on + strand at 200.356 kb on - strand at 200.373 kb on - strand at 200.373 kb on - strand at 200.373 kb on - strand at 200.403 kb on + strand at 200.403 kb on + strand at 200.403 kb on + strand at 200.404 kb on - strand at 200.630 kb on + strand, within ABIE40_RS00965 at 200.630 kb on + strand, within ABIE40_RS00965 at 200.630 kb on + strand, within ABIE40_RS00965 at 200.631 kb on - strand, within ABIE40_RS00965 at 200.631 kb on - strand, within ABIE40_RS00965 at 200.631 kb on - strand, within ABIE40_RS00965 at 200.645 kb on + strand, within ABIE40_RS00965 at 200.645 kb on + strand, within ABIE40_RS00965 at 200.646 kb on - strand, within ABIE40_RS00965 at 200.646 kb on - strand, within ABIE40_RS00965 at 200.706 kb on - strand, within ABIE40_RS00965 at 200.722 kb on - strand, within ABIE40_RS00965 at 200.722 kb on - strand, within ABIE40_RS00965 at 200.730 kb on + strand, within ABIE40_RS00965 at 200.731 kb on - strand, within ABIE40_RS00965 at 200.739 kb on + strand, within ABIE40_RS00965 at 200.739 kb on + strand, within ABIE40_RS00965 at 200.852 kb on + strand, within ABIE40_RS00965 at 200.852 kb on + strand, within ABIE40_RS00965 at 200.853 kb on - strand, within ABIE40_RS00965 at 200.853 kb on - strand, within ABIE40_RS00965 at 200.853 kb on - strand, within ABIE40_RS00965 at 200.853 kb on - strand, within ABIE40_RS00965 at 200.853 kb on - strand, within ABIE40_RS00965 at 200.862 kb on - strand, within ABIE40_RS00965 at 200.862 kb on - strand, within ABIE40_RS00965 at 200.862 kb on - strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.990 kb on + strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 200.991 kb on - strand, within ABIE40_RS00965 at 201.115 kb on + strand, within ABIE40_RS00965 at 201.115 kb on + strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.116 kb on - strand, within ABIE40_RS00965 at 201.123 kb on + strand, within ABIE40_RS00965 at 201.125 kb on + strand, within ABIE40_RS00965 at 201.125 kb on + strand, within ABIE40_RS00965 at 201.125 kb on + strand, within ABIE40_RS00965 at 201.126 kb on - strand, within ABIE40_RS00965 at 201.126 kb on - strand, within ABIE40_RS00965 at 201.126 kb on - strand, within ABIE40_RS00965 at 201.126 kb on - strand, within ABIE40_RS00965 at 201.150 kb on + strand, within ABIE40_RS00965 at 201.150 kb on + strand, within ABIE40_RS00965 at 201.151 kb on - strand, within ABIE40_RS00965
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 198,356 + ABIE40_RS00955 0.72 -0.3 198,356 + ABIE40_RS00955 0.72 +0.3 198,357 - ABIE40_RS00955 0.72 +0.4 198,357 - ABIE40_RS00955 0.72 -0.9 198,378 + ABIE40_RS00955 0.73 +0.8 198,378 + ABIE40_RS00955 0.73 -0.2 198,378 + ABIE40_RS00955 0.73 -0.8 198,379 - ABIE40_RS00955 0.73 +0.8 198,379 - ABIE40_RS00955 0.73 +0.6 198,379 - ABIE40_RS00955 0.73 -2.2 198,380 + ABIE40_RS00955 0.73 -0.9 198,380 + ABIE40_RS00955 0.73 -0.3 198,380 + ABIE40_RS00955 0.73 -1.9 198,380 + ABIE40_RS00955 0.73 +0.5 198,380 + ABIE40_RS00955 0.73 -2.9 198,380 + ABIE40_RS00955 0.73 +0.7 198,381 - ABIE40_RS00955 0.73 +0.5 198,381 - ABIE40_RS00955 0.73 +0.4 198,616 + ABIE40_RS00955 0.81 -0.6 198,616 + ABIE40_RS00955 0.81 +0.2 198,617 - ABIE40_RS00955 0.81 +0.1 198,618 + ABIE40_RS00955 0.81 -1.9 198,619 - ABIE40_RS00955 0.81 -0.0 198,619 - ABIE40_RS00955 0.81 -0.9 198,619 - ABIE40_RS00955 0.81 +0.8 198,619 - ABIE40_RS00955 0.81 -0.4 198,827 + ABIE40_RS00955 0.88 -0.4 198,828 - ABIE40_RS00955 0.88 +1.2 198,828 - ABIE40_RS00955 0.88 +0.6 198,848 + ABIE40_RS00955 0.89 -0.4 198,848 + ABIE40_RS00955 0.89 -0.4 198,848 + ABIE40_RS00955 0.89 -0.1 198,848 + ABIE40_RS00955 0.89 +0.8 198,848 + ABIE40_RS00955 0.89 -0.3 198,849 - ABIE40_RS00955 0.89 +0.6 198,849 - ABIE40_RS00955 0.89 +0.5 198,863 - ABIE40_RS00955 0.89 -0.1 198,937 - +1.1 198,937 - -0.0 198,987 - -1.1 199,091 + +0.5 199,091 + -1.6 199,092 - -0.5 199,111 + +1.3 199,111 + +0.7 199,111 + -1.3 199,111 + -1.3 199,111 + +0.8 199,111 + +0.1 199,111 + -2.3 199,112 - -0.5 199,112 - -0.4 199,112 - -0.6 199,153 - +1.1 199,153 - +0.2 199,205 + -0.2 199,206 - +0.1 199,214 + +0.6 199,215 - -1.1 199,227 - +0.1 199,237 + +0.8 199,237 + +0.3 199,249 + -1.0 199,249 + +0.6 199,250 - -1.8 199,283 + -3.3 199,283 + -1.0 199,283 + +0.8 199,283 + -0.3 199,284 - -2.3 199,284 - +1.1 199,297 + -1.5 199,297 + -1.6 199,297 + -0.5 199,298 - -2.2 199,298 - -0.2 199,298 - -0.8 199,298 - +0.6 199,298 - -0.5 199,328 + +0.8 199,362 - -0.2 199,420 + ABIE40_RS00960 0.16 -2.1 199,421 - ABIE40_RS00960 0.16 -2.6 199,421 - ABIE40_RS00960 0.16 +0.2 199,501 + ABIE40_RS00960 0.26 -1.8 199,501 + ABIE40_RS00960 0.26 -2.4 199,502 - ABIE40_RS00960 0.26 -1.2 199,540 + ABIE40_RS00960 0.30 -2.1 199,553 - ABIE40_RS00960 0.31 -2.3 199,652 - ABIE40_RS00960 0.43 -0.8 199,652 - ABIE40_RS00960 0.43 +1.8 199,786 + ABIE40_RS00960 0.58 -2.6 200,092 + +0.2 200,136 + -0.3 200,136 + -0.3 200,136 + -1.5 200,137 - -1.3 200,137 - -1.1 200,149 + -0.4 200,149 + -1.0 200,198 + -0.7 200,198 + -0.7 200,198 + -0.4 200,198 + -0.1 200,199 - -1.2 200,199 - +0.3 200,199 - -0.7 200,305 + -0.3 200,305 + +1.2 200,305 + -1.0 200,306 - +0.3 200,306 - +0.2 200,307 + -0.6 200,307 + -0.3 200,307 + +0.3 200,307 + -0.6 200,307 + +0.4 200,307 + +0.1 200,307 + -0.3 200,307 + -0.5 200,307 + +2.1 200,307 + +1.0 200,308 - +0.6 200,308 - -0.5 200,308 - -0.2 200,308 - +0.1 200,308 - -0.4 200,308 - +0.4 200,317 + -0.3 200,317 + -1.0 200,356 - -0.7 200,373 - +0.3 200,373 - -0.1 200,373 - +0.3 200,403 + -0.8 200,403 + +1.8 200,403 + +0.2 200,404 - -0.1 200,630 + ABIE40_RS00965 0.21 +0.1 200,630 + ABIE40_RS00965 0.21 -0.6 200,630 + ABIE40_RS00965 0.21 -0.8 200,631 - ABIE40_RS00965 0.21 +0.3 200,631 - ABIE40_RS00965 0.21 -1.3 200,631 - ABIE40_RS00965 0.21 -0.5 200,645 + ABIE40_RS00965 0.22 -0.9 200,645 + ABIE40_RS00965 0.22 -1.0 200,646 - ABIE40_RS00965 0.22 +2.4 200,646 - ABIE40_RS00965 0.22 +0.3 200,706 - ABIE40_RS00965 0.27 -0.6 200,722 - ABIE40_RS00965 0.28 +1.8 200,722 - ABIE40_RS00965 0.28 -0.4 200,730 + ABIE40_RS00965 0.29 -2.4 200,731 - ABIE40_RS00965 0.29 -1.6 200,739 + ABIE40_RS00965 0.29 -0.3 200,739 + ABIE40_RS00965 0.29 +0.7 200,852 + ABIE40_RS00965 0.39 +0.9 200,852 + ABIE40_RS00965 0.39 +0.0 200,853 - ABIE40_RS00965 0.39 +0.1 200,853 - ABIE40_RS00965 0.39 -1.9 200,853 - ABIE40_RS00965 0.39 +0.6 200,853 - ABIE40_RS00965 0.39 -0.1 200,853 - ABIE40_RS00965 0.39 +1.0 200,862 - ABIE40_RS00965 0.39 -0.1 200,862 - ABIE40_RS00965 0.39 -0.8 200,862 - ABIE40_RS00965 0.39 -1.0 200,990 + ABIE40_RS00965 0.50 -0.3 200,990 + ABIE40_RS00965 0.50 -0.4 200,990 + ABIE40_RS00965 0.50 -0.1 200,990 + ABIE40_RS00965 0.50 -0.2 200,990 + ABIE40_RS00965 0.50 +3.7 200,990 + ABIE40_RS00965 0.50 +0.2 200,991 - ABIE40_RS00965 0.50 -0.9 200,991 - ABIE40_RS00965 0.50 -1.4 200,991 - ABIE40_RS00965 0.50 -0.7 200,991 - ABIE40_RS00965 0.50 +0.1 200,991 - ABIE40_RS00965 0.50 -0.8 200,991 - ABIE40_RS00965 0.50 -1.6 201,115 + ABIE40_RS00965 0.60 -0.5 201,115 + ABIE40_RS00965 0.60 -0.5 201,116 - ABIE40_RS00965 0.60 -0.8 201,116 - ABIE40_RS00965 0.60 -0.3 201,116 - ABIE40_RS00965 0.60 +0.2 201,116 - ABIE40_RS00965 0.60 -0.3 201,116 - ABIE40_RS00965 0.60 -0.3 201,116 - ABIE40_RS00965 0.60 -0.9 201,116 - ABIE40_RS00965 0.60 -0.2 201,116 - ABIE40_RS00965 0.60 +1.1 201,116 - ABIE40_RS00965 0.60 -1.2 201,123 + ABIE40_RS00965 0.60 +1.5 201,125 + ABIE40_RS00965 0.60 -0.1 201,125 + ABIE40_RS00965 0.60 +1.3 201,125 + ABIE40_RS00965 0.60 -0.0 201,126 - ABIE40_RS00965 0.60 -0.1 201,126 - ABIE40_RS00965 0.60 -1.2 201,126 - ABIE40_RS00965 0.60 +0.1 201,126 - ABIE40_RS00965 0.60 +1.2 201,150 + ABIE40_RS00965 0.62 -1.5 201,150 + ABIE40_RS00965 0.62 -0.0 201,151 - ABIE40_RS00965 0.62 +0.1
Or see this region's nucleotide sequence