Experiment: D-Glucuronic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01590 and ABID97_RS01595 are separated by 11 nucleotides ABID97_RS01595 and ABID97_RS01600 are separated by 20 nucleotides ABID97_RS01600 and ABID97_RS01605 are separated by 153 nucleotides
ABID97_RS01590: ABID97_RS01590 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 313,525 to 314,571
_RS01590
ABID97_RS01595: ABID97_RS01595 - tRNA guanosine(34) transglycosylase Tgt, at 314,583 to 315,755
_RS01595
ABID97_RS01600: ABID97_RS01600 - hypothetical protein, at 315,776 to 316,132
_RS01600
ABID97_RS01605: ABID97_RS01605 - SDR family oxidoreductase, at 316,286 to 317,074
_RS01605
Position (kb) 314
315
316 Strain fitness (log2 ratio) -2
-1
0
1 at 313.951 kb on + strand, within ABID97_RS01590 at 313.993 kb on + strand, within ABID97_RS01590 at 313.993 kb on + strand, within ABID97_RS01590 at 313.993 kb on + strand, within ABID97_RS01590 at 313.994 kb on - strand, within ABID97_RS01590 at 314.197 kb on - strand, within ABID97_RS01590 at 314.491 kb on + strand at 314.492 kb on - strand at 314.492 kb on - strand at 314.492 kb on - strand at 314.492 kb on - strand at 314.530 kb on + strand at 314.694 kb on + strand at 314.694 kb on + strand at 314.695 kb on - strand at 314.695 kb on - strand at 314.695 kb on - strand at 315.033 kb on + strand, within ABID97_RS01595 at 315.034 kb on - strand, within ABID97_RS01595 at 315.034 kb on - strand, within ABID97_RS01595 at 315.234 kb on + strand, within ABID97_RS01595 at 315.235 kb on - strand, within ABID97_RS01595 at 315.654 kb on + strand at 315.655 kb on - strand at 315.655 kb on - strand at 315.655 kb on - strand at 315.657 kb on + strand at 315.658 kb on - strand at 315.658 kb on - strand at 315.777 kb on + strand at 315.777 kb on + strand at 315.912 kb on + strand, within ABID97_RS01600 at 315.912 kb on + strand, within ABID97_RS01600 at 315.912 kb on + strand, within ABID97_RS01600 at 315.912 kb on + strand, within ABID97_RS01600 at 316.172 kb on + strand at 316.211 kb on + strand at 316.212 kb on - strand at 316.242 kb on - strand at 316.273 kb on + strand at 316.273 kb on + strand at 316.274 kb on - strand at 316.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C) remove 313,951 + ABID97_RS01590 0.41 +0.4 313,993 + ABID97_RS01590 0.45 -0.3 313,993 + ABID97_RS01590 0.45 -0.9 313,993 + ABID97_RS01590 0.45 -0.6 313,994 - ABID97_RS01590 0.45 -1.1 314,197 - ABID97_RS01590 0.64 -0.9 314,491 + -1.1 314,492 - -2.0 314,492 - -0.6 314,492 - -0.1 314,492 - -0.5 314,530 + -0.6 314,694 + -2.3 314,694 + -1.6 314,695 - -1.2 314,695 - -1.3 314,695 - -1.5 315,033 + ABID97_RS01595 0.38 -1.6 315,034 - ABID97_RS01595 0.38 -1.5 315,034 - ABID97_RS01595 0.38 +0.5 315,234 + ABID97_RS01595 0.55 -1.8 315,235 - ABID97_RS01595 0.56 -2.0 315,654 + -2.0 315,655 - -0.6 315,655 - -0.5 315,655 - -0.5 315,657 + -1.8 315,658 - -1.1 315,658 - +0.4 315,777 + +0.8 315,777 + +0.0 315,912 + ABID97_RS01600 0.38 -1.5 315,912 + ABID97_RS01600 0.38 -0.4 315,912 + ABID97_RS01600 0.38 +0.2 315,912 + ABID97_RS01600 0.38 +0.1 316,172 + +0.5 316,211 + -0.3 316,212 - +0.2 316,242 - +0.4 316,273 + +0.3 316,273 + +1.7 316,274 - +0.2 316,274 - -0.5
Or see this region's nucleotide sequence