Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4309 and EX28DRAFT_4310 are separated by 125 nucleotides EX28DRAFT_4310 and EX28DRAFT_4311 are separated by 14 nucleotides
EX28DRAFT_4309: EX28DRAFT_4309 - Maltose-binding periplasmic proteins/domains, at 113,133 to 114,323
_4309
EX28DRAFT_4310: EX28DRAFT_4310 - ABC-type sugar transport systems, permease components, at 114,449 to 115,993
_4310
EX28DRAFT_4311: EX28DRAFT_4311 - ABC-type maltose transport systems, permease component, at 116,008 to 116,898
_4311
Position (kb)
114
115
116 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 113.640 kb on - strand, within EX28DRAFT_4309 at 113.673 kb on + strand, within EX28DRAFT_4309 at 113.673 kb on + strand, within EX28DRAFT_4309 at 113.737 kb on - strand, within EX28DRAFT_4309 at 113.934 kb on + strand, within EX28DRAFT_4309 at 114.170 kb on + strand, within EX28DRAFT_4309 at 114.312 kb on - strand at 114.314 kb on + strand at 114.314 kb on + strand at 114.315 kb on - strand at 114.317 kb on + strand at 114.317 kb on + strand at 114.317 kb on + strand at 114.317 kb on + strand at 114.321 kb on + strand at 114.322 kb on - strand at 114.329 kb on + strand at 114.330 kb on - strand at 114.357 kb on - strand at 114.546 kb on + strand at 114.546 kb on + strand at 114.547 kb on - strand at 114.547 kb on - strand at 114.551 kb on + strand at 114.551 kb on + strand at 114.556 kb on - strand at 114.566 kb on + strand at 114.566 kb on + strand at 114.595 kb on - strand at 114.635 kb on + strand, within EX28DRAFT_4310 at 114.636 kb on - strand, within EX28DRAFT_4310 at 114.636 kb on - strand, within EX28DRAFT_4310 at 114.648 kb on - strand, within EX28DRAFT_4310 at 114.704 kb on - strand, within EX28DRAFT_4310 at 114.721 kb on + strand, within EX28DRAFT_4310 at 114.729 kb on - strand, within EX28DRAFT_4310 at 114.729 kb on - strand, within EX28DRAFT_4310 at 114.788 kb on + strand, within EX28DRAFT_4310 at 114.789 kb on - strand, within EX28DRAFT_4310 at 114.821 kb on + strand, within EX28DRAFT_4310 at 114.875 kb on + strand, within EX28DRAFT_4310 at 114.875 kb on + strand, within EX28DRAFT_4310 at 114.875 kb on + strand, within EX28DRAFT_4310 at 114.876 kb on - strand, within EX28DRAFT_4310 at 114.876 kb on - strand, within EX28DRAFT_4310 at 114.876 kb on - strand, within EX28DRAFT_4310 at 114.878 kb on + strand, within EX28DRAFT_4310 at 114.878 kb on + strand, within EX28DRAFT_4310 at 114.879 kb on - strand, within EX28DRAFT_4310 at 114.879 kb on - strand, within EX28DRAFT_4310 at 114.879 kb on - strand, within EX28DRAFT_4310 at 115.079 kb on + strand, within EX28DRAFT_4310 at 115.079 kb on + strand, within EX28DRAFT_4310 at 115.080 kb on - strand, within EX28DRAFT_4310 at 115.080 kb on - strand, within EX28DRAFT_4310 at 115.080 kb on - strand, within EX28DRAFT_4310 at 115.082 kb on - strand, within EX28DRAFT_4310 at 115.131 kb on - strand, within EX28DRAFT_4310 at 115.565 kb on - strand, within EX28DRAFT_4310 at 115.565 kb on - strand, within EX28DRAFT_4310 at 115.595 kb on + strand, within EX28DRAFT_4310 at 115.595 kb on + strand, within EX28DRAFT_4310 at 115.596 kb on - strand, within EX28DRAFT_4310 at 115.596 kb on - strand, within EX28DRAFT_4310 at 115.596 kb on - strand, within EX28DRAFT_4310 at 115.646 kb on + strand, within EX28DRAFT_4310 at 115.718 kb on - strand, within EX28DRAFT_4310 at 115.856 kb on + strand at 115.857 kb on - strand at 115.978 kb on + strand at 115.979 kb on - strand at 116.019 kb on - strand at 116.019 kb on - strand at 116.019 kb on - strand at 116.019 kb on - strand at 116.060 kb on + strand at 116.061 kb on - strand at 116.061 kb on - strand at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.429 kb on - strand, within EX28DRAFT_4311 at 116.460 kb on - strand, within EX28DRAFT_4311 at 116.528 kb on + strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.660 kb on + strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.714 kb on + strand, within EX28DRAFT_4311 at 116.715 kb on - strand, within EX28DRAFT_4311 at 116.734 kb on + strand, within EX28DRAFT_4311 at 116.734 kb on + strand, within EX28DRAFT_4311 at 116.747 kb on + strand, within EX28DRAFT_4311 at 116.751 kb on + strand, within EX28DRAFT_4311 at 116.751 kb on + strand, within EX28DRAFT_4311 at 116.752 kb on - strand, within EX28DRAFT_4311 at 116.761 kb on + strand, within EX28DRAFT_4311 at 116.762 kb on - strand, within EX28DRAFT_4311 at 116.896 kb on + strand at 116.935 kb on - strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.945 kb on + strand at 116.945 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 113,640 - EX28DRAFT_4309 0.43 +0.0 113,673 + EX28DRAFT_4309 0.45 -0.1 113,673 + EX28DRAFT_4309 0.45 +0.4 113,737 - EX28DRAFT_4309 0.51 +0.4 113,934 + EX28DRAFT_4309 0.67 +0.1 114,170 + EX28DRAFT_4309 0.87 +0.7 114,312 - -0.0 114,314 + -0.2 114,314 + +1.4 114,315 - +0.5 114,317 + -0.2 114,317 + -0.1 114,317 + +0.2 114,317 + +0.2 114,321 + -0.2 114,322 - -0.2 114,329 + -0.4 114,330 - -0.2 114,357 - -0.1 114,546 + +0.7 114,546 + +0.4 114,547 - -1.0 114,547 - -0.1 114,551 + -0.1 114,551 + -0.4 114,556 - -0.0 114,566 + +0.3 114,566 + -0.1 114,595 - -1.5 114,635 + EX28DRAFT_4310 0.12 +0.1 114,636 - EX28DRAFT_4310 0.12 +0.1 114,636 - EX28DRAFT_4310 0.12 +0.3 114,648 - EX28DRAFT_4310 0.13 +0.8 114,704 - EX28DRAFT_4310 0.17 -0.3 114,721 + EX28DRAFT_4310 0.18 +0.1 114,729 - EX28DRAFT_4310 0.18 -0.4 114,729 - EX28DRAFT_4310 0.18 -0.5 114,788 + EX28DRAFT_4310 0.22 -1.1 114,789 - EX28DRAFT_4310 0.22 +0.1 114,821 + EX28DRAFT_4310 0.24 -0.0 114,875 + EX28DRAFT_4310 0.28 -0.7 114,875 + EX28DRAFT_4310 0.28 +0.4 114,875 + EX28DRAFT_4310 0.28 -0.4 114,876 - EX28DRAFT_4310 0.28 -1.2 114,876 - EX28DRAFT_4310 0.28 -0.1 114,876 - EX28DRAFT_4310 0.28 -0.3 114,878 + EX28DRAFT_4310 0.28 +0.9 114,878 + EX28DRAFT_4310 0.28 +0.2 114,879 - EX28DRAFT_4310 0.28 -0.2 114,879 - EX28DRAFT_4310 0.28 +0.0 114,879 - EX28DRAFT_4310 0.28 -0.0 115,079 + EX28DRAFT_4310 0.41 -0.1 115,079 + EX28DRAFT_4310 0.41 +0.5 115,080 - EX28DRAFT_4310 0.41 +0.1 115,080 - EX28DRAFT_4310 0.41 +0.3 115,080 - EX28DRAFT_4310 0.41 -0.5 115,082 - EX28DRAFT_4310 0.41 -0.0 115,131 - EX28DRAFT_4310 0.44 -0.5 115,565 - EX28DRAFT_4310 0.72 -0.6 115,565 - EX28DRAFT_4310 0.72 -0.1 115,595 + EX28DRAFT_4310 0.74 -1.3 115,595 + EX28DRAFT_4310 0.74 -0.0 115,596 - EX28DRAFT_4310 0.74 +0.6 115,596 - EX28DRAFT_4310 0.74 -0.4 115,596 - EX28DRAFT_4310 0.74 -0.7 115,646 + EX28DRAFT_4310 0.77 -0.1 115,718 - EX28DRAFT_4310 0.82 -3.6 115,856 + +0.3 115,857 - -0.1 115,978 + +0.2 115,979 - -0.1 116,019 - +0.1 116,019 - +0.4 116,019 - -0.3 116,019 - +0.5 116,060 + -0.7 116,061 - -0.5 116,061 - -0.5 116,428 + EX28DRAFT_4311 0.47 +0.2 116,428 + EX28DRAFT_4311 0.47 -0.1 116,428 + EX28DRAFT_4311 0.47 +0.1 116,428 + EX28DRAFT_4311 0.47 +1.2 116,428 + EX28DRAFT_4311 0.47 +0.4 116,429 - EX28DRAFT_4311 0.47 +0.2 116,460 - EX28DRAFT_4311 0.51 +0.8 116,528 + EX28DRAFT_4311 0.58 +0.3 116,529 - EX28DRAFT_4311 0.58 -0.1 116,529 - EX28DRAFT_4311 0.58 +0.5 116,529 - EX28DRAFT_4311 0.58 -0.1 116,660 + EX28DRAFT_4311 0.73 +0.2 116,665 - EX28DRAFT_4311 0.74 -0.2 116,665 - EX28DRAFT_4311 0.74 +0.5 116,665 - EX28DRAFT_4311 0.74 -0.1 116,714 + EX28DRAFT_4311 0.79 +0.6 116,715 - EX28DRAFT_4311 0.79 +0.3 116,734 + EX28DRAFT_4311 0.81 -0.1 116,734 + EX28DRAFT_4311 0.81 -0.6 116,747 + EX28DRAFT_4311 0.83 +0.1 116,751 + EX28DRAFT_4311 0.83 -0.3 116,751 + EX28DRAFT_4311 0.83 +0.5 116,752 - EX28DRAFT_4311 0.84 -0.1 116,761 + EX28DRAFT_4311 0.85 -0.3 116,762 - EX28DRAFT_4311 0.85 +0.6 116,896 + +0.3 116,935 - +0.3 116,940 + +0.3 116,940 + +0.5 116,940 + -0.4 116,940 + +0.1 116,941 - -1.0 116,941 - -0.1 116,941 - -0.4 116,941 - -0.4 116,941 - -0.3 116,945 + -0.3 116,945 + +0.4
Or see this region's nucleotide sequence