Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0317 and EX28DRAFT_0318 are separated by 81 nucleotides EX28DRAFT_0318 and EX28DRAFT_0319 are separated by 94 nucleotides
EX28DRAFT_0317: EX28DRAFT_0317 - Di- and tricarboxylate transporters, at 276,288 to 278,120
_0317
EX28DRAFT_0318: EX28DRAFT_0318 - Predicted hydrolases of HD superfamily, at 278,202 to 278,801
_0318
EX28DRAFT_0319: EX28DRAFT_0319 - Aspartate/tyrosine/aromatic aminotransferase, at 278,896 to 280,110
_0319
Position (kb) 278
279 Strain fitness (log2 ratio) -1
0
1
2 at 277.619 kb on + strand, within EX28DRAFT_0317 at 277.671 kb on + strand, within EX28DRAFT_0317 at 277.673 kb on + strand, within EX28DRAFT_0317 at 277.674 kb on - strand, within EX28DRAFT_0317 at 277.803 kb on + strand, within EX28DRAFT_0317 at 277.827 kb on - strand, within EX28DRAFT_0317 at 277.853 kb on + strand, within EX28DRAFT_0317 at 278.203 kb on + strand at 278.239 kb on - strand at 278.268 kb on - strand, within EX28DRAFT_0318 at 278.273 kb on - strand, within EX28DRAFT_0318 at 278.522 kb on + strand, within EX28DRAFT_0318 at 278.522 kb on + strand, within EX28DRAFT_0318 at 278.523 kb on - strand, within EX28DRAFT_0318 at 278.523 kb on - strand, within EX28DRAFT_0318 at 278.524 kb on + strand, within EX28DRAFT_0318 at 278.603 kb on - strand, within EX28DRAFT_0318 at 278.802 kb on - strand at 278.802 kb on - strand at 278.806 kb on + strand at 278.891 kb on + strand at 278.891 kb on + strand at 279.078 kb on + strand, within EX28DRAFT_0319 at 279.111 kb on + strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.112 kb on - strand, within EX28DRAFT_0319 at 279.113 kb on + strand, within EX28DRAFT_0319 at 279.113 kb on + strand, within EX28DRAFT_0319 at 279.114 kb on - strand, within EX28DRAFT_0319 at 279.191 kb on + strand, within EX28DRAFT_0319 at 279.192 kb on - strand, within EX28DRAFT_0319 at 279.283 kb on + strand, within EX28DRAFT_0319 at 279.319 kb on - strand, within EX28DRAFT_0319 at 279.320 kb on + strand, within EX28DRAFT_0319 at 279.352 kb on + strand, within EX28DRAFT_0319 at 279.505 kb on + strand, within EX28DRAFT_0319 at 279.506 kb on - strand, within EX28DRAFT_0319 at 279.506 kb on - strand, within EX28DRAFT_0319 at 279.506 kb on - strand, within EX28DRAFT_0319 at 279.506 kb on - strand, within EX28DRAFT_0319 at 279.506 kb on - strand, within EX28DRAFT_0319
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 277,619 + EX28DRAFT_0317 0.73 -0.3 277,671 + EX28DRAFT_0317 0.75 +0.1 277,673 + EX28DRAFT_0317 0.76 +0.4 277,674 - EX28DRAFT_0317 0.76 -0.8 277,803 + EX28DRAFT_0317 0.83 +0.0 277,827 - EX28DRAFT_0317 0.84 +0.1 277,853 + EX28DRAFT_0317 0.85 +0.3 278,203 + +0.1 278,239 - -0.4 278,268 - EX28DRAFT_0318 0.11 -1.5 278,273 - EX28DRAFT_0318 0.12 -0.1 278,522 + EX28DRAFT_0318 0.53 -1.2 278,522 + EX28DRAFT_0318 0.53 -0.2 278,523 - EX28DRAFT_0318 0.54 -0.9 278,523 - EX28DRAFT_0318 0.54 +0.0 278,524 + EX28DRAFT_0318 0.54 +0.2 278,603 - EX28DRAFT_0318 0.67 -0.0 278,802 - -0.4 278,802 - -0.1 278,806 + -0.0 278,891 + -0.1 278,891 + -0.4 279,078 + EX28DRAFT_0319 0.15 -0.4 279,111 + EX28DRAFT_0319 0.18 -0.5 279,112 - EX28DRAFT_0319 0.18 +0.1 279,112 - EX28DRAFT_0319 0.18 +2.7 279,112 - EX28DRAFT_0319 0.18 +0.5 279,112 - EX28DRAFT_0319 0.18 -0.2 279,112 - EX28DRAFT_0319 0.18 +0.9 279,112 - EX28DRAFT_0319 0.18 -0.5 279,112 - EX28DRAFT_0319 0.18 -0.2 279,112 - EX28DRAFT_0319 0.18 +0.2 279,113 + EX28DRAFT_0319 0.18 -0.2 279,113 + EX28DRAFT_0319 0.18 -1.0 279,114 - EX28DRAFT_0319 0.18 -0.1 279,191 + EX28DRAFT_0319 0.24 -0.0 279,192 - EX28DRAFT_0319 0.24 -0.3 279,283 + EX28DRAFT_0319 0.32 +1.1 279,319 - EX28DRAFT_0319 0.35 -0.7 279,320 + EX28DRAFT_0319 0.35 -0.3 279,352 + EX28DRAFT_0319 0.38 +0.1 279,505 + EX28DRAFT_0319 0.50 -0.3 279,506 - EX28DRAFT_0319 0.50 -1.3 279,506 - EX28DRAFT_0319 0.50 -0.6 279,506 - EX28DRAFT_0319 0.50 -1.1 279,506 - EX28DRAFT_0319 0.50 -0.1 279,506 - EX28DRAFT_0319 0.50 -0.3
Or see this region's nucleotide sequence