Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0148 and EX28DRAFT_0149 are separated by 301 nucleotides EX28DRAFT_0149 and EX28DRAFT_0150 are separated by 31 nucleotides
EX28DRAFT_0148: EX28DRAFT_0148 - Acetolactate synthase, at 92,619 to 94,544
_0148
EX28DRAFT_0149: EX28DRAFT_0149 - Predicted dehydrogenases and related proteins, at 94,846 to 95,832
_0149
EX28DRAFT_0150: EX28DRAFT_0150 - ABC-type sugar transport system, periplasmic component, at 95,864 to 96,793
_0150
Position (kb) 94
95
96 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 93.949 kb on + strand, within EX28DRAFT_0148 at 93.984 kb on + strand, within EX28DRAFT_0148 at 93.997 kb on - strand, within EX28DRAFT_0148 at 94.071 kb on + strand, within EX28DRAFT_0148 at 94.072 kb on - strand, within EX28DRAFT_0148 at 94.095 kb on + strand, within EX28DRAFT_0148 at 94.096 kb on - strand, within EX28DRAFT_0148 at 94.096 kb on - strand, within EX28DRAFT_0148 at 94.096 kb on - strand, within EX28DRAFT_0148 at 94.142 kb on + strand, within EX28DRAFT_0148 at 94.142 kb on + strand, within EX28DRAFT_0148 at 94.143 kb on - strand, within EX28DRAFT_0148 at 94.187 kb on + strand, within EX28DRAFT_0148 at 94.188 kb on - strand, within EX28DRAFT_0148 at 94.311 kb on + strand, within EX28DRAFT_0148 at 94.437 kb on + strand at 94.619 kb on - strand at 94.890 kb on - strand at 94.890 kb on - strand at 94.899 kb on + strand at 94.981 kb on + strand, within EX28DRAFT_0149 at 94.982 kb on - strand, within EX28DRAFT_0149 at 94.982 kb on - strand, within EX28DRAFT_0149 at 95.126 kb on + strand, within EX28DRAFT_0149 at 95.166 kb on - strand, within EX28DRAFT_0149 at 95.177 kb on - strand, within EX28DRAFT_0149 at 95.491 kb on + strand, within EX28DRAFT_0149 at 95.491 kb on + strand, within EX28DRAFT_0149 at 95.776 kb on + strand at 95.776 kb on + strand at 95.831 kb on - strand at 95.845 kb on + strand at 95.859 kb on + strand at 95.859 kb on + strand at 95.859 kb on + strand at 95.859 kb on + strand at 95.859 kb on + strand at 95.859 kb on + strand at 95.860 kb on - strand at 95.860 kb on - strand at 95.860 kb on - strand at 95.944 kb on + strand at 96.107 kb on - strand, within EX28DRAFT_0150 at 96.239 kb on + strand, within EX28DRAFT_0150 at 96.239 kb on + strand, within EX28DRAFT_0150 at 96.239 kb on + strand, within EX28DRAFT_0150 at 96.240 kb on - strand, within EX28DRAFT_0150 at 96.385 kb on + strand, within EX28DRAFT_0150 at 96.385 kb on + strand, within EX28DRAFT_0150 at 96.389 kb on + strand, within EX28DRAFT_0150 at 96.509 kb on - strand, within EX28DRAFT_0150 at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.791 kb on + strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.792 kb on - strand at 96.794 kb on + strand at 96.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 93,949 + EX28DRAFT_0148 0.69 -0.1 93,984 + EX28DRAFT_0148 0.71 -0.0 93,997 - EX28DRAFT_0148 0.72 -0.1 94,071 + EX28DRAFT_0148 0.75 -0.4 94,072 - EX28DRAFT_0148 0.75 +0.5 94,095 + EX28DRAFT_0148 0.77 +0.1 94,096 - EX28DRAFT_0148 0.77 +0.1 94,096 - EX28DRAFT_0148 0.77 +4.0 94,096 - EX28DRAFT_0148 0.77 +0.3 94,142 + EX28DRAFT_0148 0.79 +0.3 94,142 + EX28DRAFT_0148 0.79 +0.9 94,143 - EX28DRAFT_0148 0.79 +0.3 94,187 + EX28DRAFT_0148 0.81 +0.4 94,188 - EX28DRAFT_0148 0.81 +0.3 94,311 + EX28DRAFT_0148 0.88 +0.7 94,437 + -0.1 94,619 - +0.1 94,890 - -0.3 94,890 - -0.0 94,899 + +0.2 94,981 + EX28DRAFT_0149 0.14 -0.0 94,982 - EX28DRAFT_0149 0.14 +0.1 94,982 - EX28DRAFT_0149 0.14 +0.0 95,126 + EX28DRAFT_0149 0.28 +0.1 95,166 - EX28DRAFT_0149 0.32 +1.2 95,177 - EX28DRAFT_0149 0.34 +0.1 95,491 + EX28DRAFT_0149 0.65 -1.2 95,491 + EX28DRAFT_0149 0.65 -0.8 95,776 + -0.6 95,776 + -0.7 95,831 - +0.9 95,845 + -1.0 95,859 + -0.5 95,859 + +0.4 95,859 + -0.2 95,859 + -0.2 95,859 + +0.8 95,859 + +0.2 95,860 - +0.5 95,860 - -0.1 95,860 - +0.4 95,944 + +0.7 96,107 - EX28DRAFT_0150 0.26 +0.6 96,239 + EX28DRAFT_0150 0.40 -0.4 96,239 + EX28DRAFT_0150 0.40 +0.6 96,239 + EX28DRAFT_0150 0.40 -0.1 96,240 - EX28DRAFT_0150 0.40 -0.1 96,385 + EX28DRAFT_0150 0.56 -0.2 96,385 + EX28DRAFT_0150 0.56 +0.2 96,389 + EX28DRAFT_0150 0.56 +0.2 96,509 - EX28DRAFT_0150 0.69 +0.1 96,791 + -0.1 96,791 + +0.5 96,791 + -0.8 96,791 + +0.1 96,791 + +0.2 96,791 + -1.7 96,791 + -0.1 96,791 + +0.1 96,791 + +0.1 96,792 - +0.7 96,792 - -0.4 96,792 - -0.0 96,792 - +0.3 96,792 - +0.4 96,792 - +1.2 96,792 - +1.0 96,792 - -1.0 96,792 - +0.1 96,794 + +0.1 96,794 + +0.2
Or see this region's nucleotide sequence