Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_73 and PfGW456L13_74 are separated by 47 nucleotides PfGW456L13_74 and PfGW456L13_75 are separated by 20 nucleotides PfGW456L13_75 and PfGW456L13_76 are separated by 192 nucleotides
PfGW456L13_73 - FIG00955840: hypothetical protein, at 84,087 to 84,440
_73
PfGW456L13_74 - Copper metallochaperone, bacterial analog of Cox17 protein, at 84,488 to 84,967
_74
PfGW456L13_75 - Putative multicopper oxidases, at 84,988 to 85,440
_75
PfGW456L13_76 - Outer membrane receptor proteins, mostly Fe transport, at 85,633 to 87,750
_76
Position (kb) 84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2 at 83.998 kb on + strand at 83.998 kb on + strand at 83.999 kb on - strand at 83.999 kb on - strand at 84.317 kb on + strand, within PfGW456L13_73 at 84.317 kb on + strand, within PfGW456L13_73 at 84.330 kb on + strand, within PfGW456L13_73 at 84.965 kb on + strand at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.519 kb on + strand at 85.519 kb on + strand at 85.519 kb on + strand at 85.519 kb on + strand at 85.520 kb on - strand at 85.520 kb on - strand at 85.609 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.682 kb on - strand at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.071 kb on + strand, within PfGW456L13_76 at 86.071 kb on + strand, within PfGW456L13_76 at 86.139 kb on + strand, within PfGW456L13_76 at 86.266 kb on + strand, within PfGW456L13_76 at 86.267 kb on - strand, within PfGW456L13_76 at 86.306 kb on - strand, within PfGW456L13_76
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 83,998 + +0.5 83,998 + -0.9 83,999 - -1.4 83,999 - -0.6 84,317 + PfGW456L13_73 0.65 +1.2 84,317 + PfGW456L13_73 0.65 -0.7 84,330 + PfGW456L13_73 0.69 +0.6 84,965 + -1.1 85,350 + PfGW456L13_75 0.80 +0.4 85,350 + PfGW456L13_75 0.80 +1.8 85,350 + PfGW456L13_75 0.80 +0.2 85,350 + PfGW456L13_75 0.80 +0.8 85,519 + -1.3 85,519 + +1.0 85,519 + -1.3 85,519 + -1.6 85,520 - -0.1 85,520 - +0.3 85,609 + +0.2 85,681 + +0.7 85,681 + +0.2 85,681 + -1.9 85,681 + -1.6 85,681 + -0.1 85,682 - -1.9 86,053 + PfGW456L13_76 0.20 -0.1 86,053 + PfGW456L13_76 0.20 +0.1 86,053 + PfGW456L13_76 0.20 -0.8 86,053 + PfGW456L13_76 0.20 +0.3 86,053 + PfGW456L13_76 0.20 -0.3 86,053 + PfGW456L13_76 0.20 +0.1 86,053 + PfGW456L13_76 0.20 -0.6 86,053 + PfGW456L13_76 0.20 -0.1 86,053 + PfGW456L13_76 0.20 -0.6 86,054 - PfGW456L13_76 0.20 +0.5 86,054 - PfGW456L13_76 0.20 -0.4 86,054 - PfGW456L13_76 0.20 -0.8 86,054 - PfGW456L13_76 0.20 -1.2 86,054 - PfGW456L13_76 0.20 -0.4 86,071 + PfGW456L13_76 0.21 +0.4 86,071 + PfGW456L13_76 0.21 -0.9 86,139 + PfGW456L13_76 0.24 +0.1 86,266 + PfGW456L13_76 0.30 +0.2 86,267 - PfGW456L13_76 0.30 +0.1 86,306 - PfGW456L13_76 0.32 +0.3
Or see this region's nucleotide sequence