Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4477 and PfGW456L13_4478 overlap by 4 nucleotides PfGW456L13_4478 and PfGW456L13_4479 are separated by 73 nucleotides PfGW456L13_4479 and PfGW456L13_4480 are separated by 146 nucleotides
PfGW456L13_4477 - Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54), at 5,006,442 to 5,007,146
_4477
PfGW456L13_4478 - Lactam utilization protein LamB, at 5,007,143 to 5,007,895
_4478
PfGW456L13_4479 - Sialic acid transporter (permease) NanT, at 5,007,969 to 5,009,255
_4479
PfGW456L13_4480 - Cyn operon transcriptional activator, at 5,009,402 to 5,010,316
_4480
Position (kb)
5007
5008
5009
5010 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5006.975 kb on - strand, within PfGW456L13_4477 at 5006.995 kb on + strand, within PfGW456L13_4477 at 5006.995 kb on + strand, within PfGW456L13_4477 at 5006.996 kb on - strand, within PfGW456L13_4477 at 5007.376 kb on - strand, within PfGW456L13_4478 at 5007.376 kb on - strand, within PfGW456L13_4478 at 5007.489 kb on + strand, within PfGW456L13_4478 at 5007.489 kb on + strand, within PfGW456L13_4478 at 5007.490 kb on - strand, within PfGW456L13_4478 at 5007.549 kb on + strand, within PfGW456L13_4478 at 5007.549 kb on + strand, within PfGW456L13_4478 at 5007.550 kb on - strand, within PfGW456L13_4478 at 5007.550 kb on - strand, within PfGW456L13_4478 at 5007.550 kb on - strand, within PfGW456L13_4478 at 5007.550 kb on - strand, within PfGW456L13_4478 at 5007.573 kb on + strand, within PfGW456L13_4478 at 5007.573 kb on + strand, within PfGW456L13_4478 at 5007.574 kb on - strand, within PfGW456L13_4478 at 5007.661 kb on - strand, within PfGW456L13_4478 at 5007.661 kb on - strand, within PfGW456L13_4478 at 5007.700 kb on - strand, within PfGW456L13_4478 at 5007.881 kb on + strand at 5007.882 kb on - strand at 5007.882 kb on - strand at 5007.910 kb on + strand at 5007.910 kb on + strand at 5007.911 kb on - strand at 5007.911 kb on - strand at 5007.911 kb on - strand at 5007.911 kb on - strand at 5007.911 kb on - strand at 5007.917 kb on + strand at 5007.918 kb on - strand at 5007.939 kb on + strand at 5007.939 kb on + strand at 5007.940 kb on - strand at 5007.940 kb on - strand at 5007.940 kb on - strand at 5007.940 kb on - strand at 5007.964 kb on - strand at 5007.970 kb on + strand at 5008.066 kb on - strand at 5008.141 kb on + strand, within PfGW456L13_4479 at 5008.141 kb on + strand, within PfGW456L13_4479 at 5008.142 kb on - strand, within PfGW456L13_4479 at 5008.341 kb on - strand, within PfGW456L13_4479 at 5008.341 kb on - strand, within PfGW456L13_4479 at 5008.363 kb on + strand, within PfGW456L13_4479 at 5008.363 kb on + strand, within PfGW456L13_4479 at 5008.378 kb on + strand, within PfGW456L13_4479 at 5008.378 kb on + strand, within PfGW456L13_4479 at 5008.378 kb on + strand, within PfGW456L13_4479 at 5008.387 kb on + strand, within PfGW456L13_4479 at 5008.414 kb on + strand, within PfGW456L13_4479 at 5008.414 kb on + strand, within PfGW456L13_4479 at 5008.424 kb on + strand, within PfGW456L13_4479 at 5008.431 kb on + strand, within PfGW456L13_4479 at 5008.431 kb on + strand, within PfGW456L13_4479 at 5008.431 kb on + strand, within PfGW456L13_4479 at 5008.432 kb on - strand, within PfGW456L13_4479 at 5008.486 kb on + strand, within PfGW456L13_4479 at 5008.487 kb on - strand, within PfGW456L13_4479 at 5008.564 kb on + strand, within PfGW456L13_4479 at 5008.565 kb on - strand, within PfGW456L13_4479 at 5008.612 kb on + strand, within PfGW456L13_4479 at 5008.613 kb on - strand, within PfGW456L13_4479 at 5008.648 kb on - strand, within PfGW456L13_4479 at 5008.648 kb on - strand, within PfGW456L13_4479 at 5008.732 kb on + strand, within PfGW456L13_4479 at 5008.733 kb on - strand, within PfGW456L13_4479 at 5008.900 kb on + strand, within PfGW456L13_4479 at 5008.900 kb on + strand, within PfGW456L13_4479 at 5008.901 kb on - strand, within PfGW456L13_4479 at 5009.277 kb on + strand at 5009.284 kb on - strand at 5009.364 kb on - strand at 5009.366 kb on + strand at 5009.385 kb on + strand at 5009.385 kb on + strand at 5009.600 kb on + strand, within PfGW456L13_4480 at 5009.780 kb on - strand at 5009.921 kb on + strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.922 kb on - strand, within PfGW456L13_4480 at 5009.934 kb on - strand, within PfGW456L13_4480 at 5009.976 kb on - strand, within PfGW456L13_4480 at 5009.976 kb on - strand, within PfGW456L13_4480
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 5,006,975 - PfGW456L13_4477 0.76 +0.3 5,006,995 + PfGW456L13_4477 0.78 -0.3 5,006,995 + PfGW456L13_4477 0.78 -1.2 5,006,996 - PfGW456L13_4477 0.79 +0.9 5,007,376 - PfGW456L13_4478 0.31 -0.4 5,007,376 - PfGW456L13_4478 0.31 -0.3 5,007,489 + PfGW456L13_4478 0.46 +0.5 5,007,489 + PfGW456L13_4478 0.46 -0.2 5,007,490 - PfGW456L13_4478 0.46 +0.1 5,007,549 + PfGW456L13_4478 0.54 +0.2 5,007,549 + PfGW456L13_4478 0.54 +0.5 5,007,550 - PfGW456L13_4478 0.54 -0.4 5,007,550 - PfGW456L13_4478 0.54 -0.8 5,007,550 - PfGW456L13_4478 0.54 +0.0 5,007,550 - PfGW456L13_4478 0.54 -0.5 5,007,573 + PfGW456L13_4478 0.57 +2.3 5,007,573 + PfGW456L13_4478 0.57 +0.9 5,007,574 - PfGW456L13_4478 0.57 +0.4 5,007,661 - PfGW456L13_4478 0.69 -0.6 5,007,661 - PfGW456L13_4478 0.69 -2.1 5,007,700 - PfGW456L13_4478 0.74 -0.1 5,007,881 + -0.4 5,007,882 - +1.3 5,007,882 - -0.3 5,007,910 + -0.8 5,007,910 + -1.1 5,007,911 - -0.8 5,007,911 - +0.9 5,007,911 - +0.7 5,007,911 - -0.2 5,007,911 - +0.1 5,007,917 + +0.2 5,007,918 - -0.4 5,007,939 + -1.0 5,007,939 + -1.9 5,007,940 - -0.1 5,007,940 - +0.3 5,007,940 - +0.0 5,007,940 - +0.5 5,007,964 - +0.9 5,007,970 + -0.1 5,008,066 - +0.4 5,008,141 + PfGW456L13_4479 0.13 +0.2 5,008,141 + PfGW456L13_4479 0.13 +0.5 5,008,142 - PfGW456L13_4479 0.13 +0.9 5,008,341 - PfGW456L13_4479 0.29 -0.2 5,008,341 - PfGW456L13_4479 0.29 -0.6 5,008,363 + PfGW456L13_4479 0.31 -0.7 5,008,363 + PfGW456L13_4479 0.31 +0.0 5,008,378 + PfGW456L13_4479 0.32 -0.3 5,008,378 + PfGW456L13_4479 0.32 +0.6 5,008,378 + PfGW456L13_4479 0.32 +0.6 5,008,387 + PfGW456L13_4479 0.32 +0.3 5,008,414 + PfGW456L13_4479 0.35 -0.1 5,008,414 + PfGW456L13_4479 0.35 +0.2 5,008,424 + PfGW456L13_4479 0.35 +1.7 5,008,431 + PfGW456L13_4479 0.36 +0.8 5,008,431 + PfGW456L13_4479 0.36 -0.3 5,008,431 + PfGW456L13_4479 0.36 +0.9 5,008,432 - PfGW456L13_4479 0.36 +0.1 5,008,486 + PfGW456L13_4479 0.40 +0.8 5,008,487 - PfGW456L13_4479 0.40 +0.5 5,008,564 + PfGW456L13_4479 0.46 +0.3 5,008,565 - PfGW456L13_4479 0.46 -0.9 5,008,612 + PfGW456L13_4479 0.50 +1.8 5,008,613 - PfGW456L13_4479 0.50 +1.9 5,008,648 - PfGW456L13_4479 0.53 +1.1 5,008,648 - PfGW456L13_4479 0.53 -0.2 5,008,732 + PfGW456L13_4479 0.59 +0.2 5,008,733 - PfGW456L13_4479 0.59 +0.2 5,008,900 + PfGW456L13_4479 0.72 +0.8 5,008,900 + PfGW456L13_4479 0.72 +0.8 5,008,901 - PfGW456L13_4479 0.72 +0.0 5,009,277 + -0.1 5,009,284 - -0.4 5,009,364 - +0.2 5,009,366 + +0.2 5,009,385 + +0.4 5,009,385 + +0.0 5,009,600 + PfGW456L13_4480 0.22 +0.1 5,009,780 - +2.5 5,009,921 + PfGW456L13_4480 0.57 +0.7 5,009,922 - PfGW456L13_4480 0.57 +0.3 5,009,922 - PfGW456L13_4480 0.57 -0.7 5,009,922 - PfGW456L13_4480 0.57 +1.0 5,009,922 - PfGW456L13_4480 0.57 -0.4 5,009,922 - PfGW456L13_4480 0.57 -0.4 5,009,922 - PfGW456L13_4480 0.57 +0.3 5,009,922 - PfGW456L13_4480 0.57 -0.1 5,009,934 - PfGW456L13_4480 0.58 +0.1 5,009,976 - PfGW456L13_4480 0.63 -0.4 5,009,976 - PfGW456L13_4480 0.63 -0.2
Or see this region's nucleotide sequence