Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3432 and PfGW456L13_3433 are separated by 421 nucleotides PfGW456L13_3433 and PfGW456L13_3434 are separated by 90 nucleotides PfGW456L13_3434 and PfGW456L13_3435 overlap by 4 nucleotides
PfGW456L13_3432 - Anaerobic dehydrogenases, typically selenocysteine-containing, at 3,851,355 to 3,853,016
_3432
PfGW456L13_3433 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 3,853,438 to 3,854,283
_3433
PfGW456L13_3434 - Permease of the drug/metabolite transporter (DMT) superfamily, at 3,854,374 to 3,855,258
_3434
PfGW456L13_3435 - Protein tyrosine phosphatase (EC 3.1.3.48), at 3,855,255 to 3,856,040
_3435
Position (kb)
3853
3854
3855 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3852.448 kb on + strand, within PfGW456L13_3432 at 3852.490 kb on + strand, within PfGW456L13_3432 at 3852.491 kb on - strand, within PfGW456L13_3432 at 3852.491 kb on - strand, within PfGW456L13_3432 at 3852.491 kb on - strand, within PfGW456L13_3432 at 3852.491 kb on - strand, within PfGW456L13_3432 at 3852.593 kb on - strand, within PfGW456L13_3432 at 3852.613 kb on + strand, within PfGW456L13_3432 at 3852.614 kb on - strand, within PfGW456L13_3432 at 3852.614 kb on - strand, within PfGW456L13_3432 at 3852.628 kb on + strand, within PfGW456L13_3432 at 3852.676 kb on + strand, within PfGW456L13_3432 at 3852.811 kb on + strand, within PfGW456L13_3432 at 3852.812 kb on - strand, within PfGW456L13_3432 at 3852.821 kb on + strand, within PfGW456L13_3432 at 3852.869 kb on - strand at 3852.879 kb on - strand at 3852.879 kb on - strand at 3852.898 kb on + strand at 3853.023 kb on + strand at 3853.023 kb on + strand at 3853.023 kb on + strand at 3853.024 kb on - strand at 3853.024 kb on - strand at 3853.049 kb on + strand at 3853.049 kb on + strand at 3853.256 kb on - strand at 3853.471 kb on - strand at 3853.732 kb on - strand, within PfGW456L13_3433 at 3853.972 kb on - strand, within PfGW456L13_3433 at 3854.029 kb on + strand, within PfGW456L13_3433 at 3854.029 kb on + strand, within PfGW456L13_3433 at 3854.218 kb on + strand at 3854.218 kb on + strand at 3854.218 kb on + strand at 3854.219 kb on - strand at 3854.288 kb on + strand at 3854.313 kb on - strand at 3854.476 kb on + strand, within PfGW456L13_3434 at 3854.477 kb on - strand, within PfGW456L13_3434 at 3854.557 kb on + strand, within PfGW456L13_3434 at 3854.557 kb on + strand, within PfGW456L13_3434 at 3854.602 kb on + strand, within PfGW456L13_3434 at 3854.732 kb on + strand, within PfGW456L13_3434 at 3854.747 kb on + strand, within PfGW456L13_3434 at 3854.858 kb on - strand, within PfGW456L13_3434 at 3854.866 kb on + strand, within PfGW456L13_3434 at 3854.866 kb on + strand, within PfGW456L13_3434 at 3854.867 kb on - strand, within PfGW456L13_3434 at 3854.867 kb on - strand, within PfGW456L13_3434 at 3854.920 kb on + strand, within PfGW456L13_3434 at 3854.921 kb on - strand, within PfGW456L13_3434 at 3855.053 kb on + strand, within PfGW456L13_3434 at 3855.256 kb on + strand at 3855.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,852,448 + PfGW456L13_3432 0.66 +0.4 3,852,490 + PfGW456L13_3432 0.68 -0.5 3,852,491 - PfGW456L13_3432 0.68 +0.1 3,852,491 - PfGW456L13_3432 0.68 -0.5 3,852,491 - PfGW456L13_3432 0.68 +0.9 3,852,491 - PfGW456L13_3432 0.68 -1.2 3,852,593 - PfGW456L13_3432 0.74 +0.7 3,852,613 + PfGW456L13_3432 0.76 -1.1 3,852,614 - PfGW456L13_3432 0.76 +0.1 3,852,614 - PfGW456L13_3432 0.76 -1.6 3,852,628 + PfGW456L13_3432 0.77 -0.3 3,852,676 + PfGW456L13_3432 0.79 -0.5 3,852,811 + PfGW456L13_3432 0.88 +1.0 3,852,812 - PfGW456L13_3432 0.88 +0.1 3,852,821 + PfGW456L13_3432 0.88 +0.2 3,852,869 - +0.0 3,852,879 - -2.2 3,852,879 - +0.0 3,852,898 + +0.7 3,853,023 + -1.3 3,853,023 + +2.2 3,853,023 + +0.4 3,853,024 - +0.7 3,853,024 - +0.6 3,853,049 + -0.5 3,853,049 + -0.1 3,853,256 - +0.2 3,853,471 - +0.0 3,853,732 - PfGW456L13_3433 0.35 +0.5 3,853,972 - PfGW456L13_3433 0.63 +0.4 3,854,029 + PfGW456L13_3433 0.70 +1.0 3,854,029 + PfGW456L13_3433 0.70 -0.9 3,854,218 + +0.7 3,854,218 + -1.6 3,854,218 + -0.5 3,854,219 - +1.6 3,854,288 + -1.4 3,854,313 - -0.3 3,854,476 + PfGW456L13_3434 0.12 +0.3 3,854,477 - PfGW456L13_3434 0.12 -0.3 3,854,557 + PfGW456L13_3434 0.21 +0.5 3,854,557 + PfGW456L13_3434 0.21 -0.6 3,854,602 + PfGW456L13_3434 0.26 +0.6 3,854,732 + PfGW456L13_3434 0.40 -0.7 3,854,747 + PfGW456L13_3434 0.42 -0.5 3,854,858 - PfGW456L13_3434 0.55 +0.3 3,854,866 + PfGW456L13_3434 0.56 +0.4 3,854,866 + PfGW456L13_3434 0.56 +0.6 3,854,867 - PfGW456L13_3434 0.56 -0.8 3,854,867 - PfGW456L13_3434 0.56 +1.2 3,854,920 + PfGW456L13_3434 0.62 -1.0 3,854,921 - PfGW456L13_3434 0.62 -0.6 3,855,053 + PfGW456L13_3434 0.77 -0.8 3,855,256 + -0.6 3,855,273 - +0.1
Or see this region's nucleotide sequence