Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_233 and PfGW456L13_234 are separated by 361 nucleotides PfGW456L13_234 and PfGW456L13_235 overlap by 25 nucleotides PfGW456L13_235 and PfGW456L13_236 overlap by 23 nucleotides
PfGW456L13_233 - Chromosome (plasmid) partitioning protein ParA, at 278,690 to 279,460
_233
PfGW456L13_234 - 3-oxoacyl-[ACP] synthase, at 279,822 to 280,541
_234
PfGW456L13_235 - FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 280,517 to 281,329
_235
PfGW456L13_236 - Acyl carrier protein (ACP1), at 281,307 to 281,582
_236
Position (kb) 279
280
281 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 278.971 kb on - strand, within PfGW456L13_233 at 279.079 kb on - strand, within PfGW456L13_233 at 279.090 kb on + strand, within PfGW456L13_233 at 279.091 kb on - strand, within PfGW456L13_233 at 279.118 kb on + strand, within PfGW456L13_233 at 279.118 kb on + strand, within PfGW456L13_233 at 279.118 kb on + strand, within PfGW456L13_233 at 279.219 kb on + strand, within PfGW456L13_233 at 279.219 kb on + strand, within PfGW456L13_233 at 279.219 kb on + strand, within PfGW456L13_233 at 279.219 kb on + strand, within PfGW456L13_233 at 279.220 kb on - strand, within PfGW456L13_233 at 279.220 kb on - strand, within PfGW456L13_233 at 279.220 kb on - strand, within PfGW456L13_233 at 279.220 kb on - strand, within PfGW456L13_233 at 279.220 kb on - strand, within PfGW456L13_233 at 279.298 kb on + strand, within PfGW456L13_233 at 279.298 kb on + strand, within PfGW456L13_233 at 279.324 kb on + strand, within PfGW456L13_233 at 279.325 kb on - strand, within PfGW456L13_233 at 279.325 kb on - strand, within PfGW456L13_233 at 279.476 kb on + strand at 279.477 kb on - strand at 279.496 kb on + strand at 279.497 kb on - strand at 279.497 kb on - strand at 279.516 kb on - strand at 279.516 kb on - strand at 279.516 kb on - strand at 279.516 kb on - strand at 279.520 kb on + strand at 279.521 kb on - strand at 279.521 kb on - strand at 279.540 kb on + strand at 279.540 kb on + strand at 279.540 kb on + strand at 279.540 kb on + strand at 279.540 kb on + strand at 279.541 kb on - strand at 279.541 kb on - strand at 279.541 kb on - strand at 279.541 kb on - strand at 279.541 kb on - strand at 279.541 kb on - strand at 279.617 kb on + strand at 279.618 kb on - strand at 279.620 kb on + strand at 279.620 kb on + strand at 279.620 kb on + strand at 279.620 kb on + strand at 279.620 kb on + strand at 279.621 kb on - strand at 279.621 kb on - strand at 279.621 kb on - strand at 279.621 kb on - strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.632 kb on + strand at 279.633 kb on - strand at 279.633 kb on - strand at 279.633 kb on - strand at 279.633 kb on - strand at 279.633 kb on - strand at 279.703 kb on - strand at 279.703 kb on - strand at 279.723 kb on + strand at 279.723 kb on + strand at 279.760 kb on - strand at 279.794 kb on + strand at 279.795 kb on - strand at 279.795 kb on - strand at 279.795 kb on - strand at 280.356 kb on + strand, within PfGW456L13_234 at 280.357 kb on - strand, within PfGW456L13_234 at 280.357 kb on - strand, within PfGW456L13_234 at 280.516 kb on + strand at 280.517 kb on - strand at 280.517 kb on - strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.563 kb on - strand at 280.563 kb on - strand at 280.566 kb on - strand at 280.647 kb on + strand, within PfGW456L13_235 at 280.648 kb on - strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.935 kb on - strand, within PfGW456L13_235 at 280.935 kb on - strand, within PfGW456L13_235 at 281.206 kb on + strand, within PfGW456L13_235 at 281.207 kb on - strand, within PfGW456L13_235 at 281.208 kb on + strand, within PfGW456L13_235 at 281.208 kb on + strand, within PfGW456L13_235 at 281.209 kb on - strand, within PfGW456L13_235 at 281.270 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.484 kb on + strand, within PfGW456L13_236 at 281.485 kb on - strand, within PfGW456L13_236 at 281.535 kb on - strand, within PfGW456L13_236
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 278,971 - PfGW456L13_233 0.36 -3.5 279,079 - PfGW456L13_233 0.50 +0.5 279,090 + PfGW456L13_233 0.52 +0.8 279,091 - PfGW456L13_233 0.52 -0.0 279,118 + PfGW456L13_233 0.56 +0.6 279,118 + PfGW456L13_233 0.56 -0.3 279,118 + PfGW456L13_233 0.56 +0.4 279,219 + PfGW456L13_233 0.69 -0.4 279,219 + PfGW456L13_233 0.69 +0.7 279,219 + PfGW456L13_233 0.69 +0.7 279,219 + PfGW456L13_233 0.69 +0.1 279,220 - PfGW456L13_233 0.69 -0.2 279,220 - PfGW456L13_233 0.69 +0.8 279,220 - PfGW456L13_233 0.69 +1.2 279,220 - PfGW456L13_233 0.69 -0.0 279,220 - PfGW456L13_233 0.69 -0.4 279,298 + PfGW456L13_233 0.79 +0.5 279,298 + PfGW456L13_233 0.79 -0.1 279,324 + PfGW456L13_233 0.82 +0.3 279,325 - PfGW456L13_233 0.82 -0.6 279,325 - PfGW456L13_233 0.82 +0.6 279,476 + +0.5 279,477 - +0.2 279,496 + +0.8 279,497 - +0.6 279,497 - +0.1 279,516 - -0.4 279,516 - +0.5 279,516 - +0.2 279,516 - +0.2 279,520 + +0.6 279,521 - +0.5 279,521 - +0.3 279,540 + +0.0 279,540 + -0.3 279,540 + +0.6 279,540 + +0.3 279,540 + +0.1 279,541 - +1.3 279,541 - -0.4 279,541 - +0.8 279,541 - -0.4 279,541 - +0.3 279,541 - +1.4 279,617 + +0.2 279,618 - +0.5 279,620 + +0.4 279,620 + -0.4 279,620 + -0.3 279,620 + +1.0 279,620 + -0.1 279,621 - -0.7 279,621 - +1.4 279,621 - -0.7 279,621 - +0.8 279,632 + +0.1 279,632 + +0.5 279,632 + -0.2 279,632 + +0.0 279,632 + +0.5 279,632 + -0.5 279,632 + +0.9 279,632 + -1.4 279,633 - -0.1 279,633 - +0.9 279,633 - -0.6 279,633 - +0.1 279,633 - +0.1 279,703 - +0.0 279,703 - -0.2 279,723 + -0.2 279,723 + -0.2 279,760 - +1.8 279,794 + -0.4 279,795 - +0.3 279,795 - +0.9 279,795 - -0.0 280,356 + PfGW456L13_234 0.74 +0.9 280,357 - PfGW456L13_234 0.74 +1.1 280,357 - PfGW456L13_234 0.74 -0.0 280,516 + -0.4 280,517 - +0.5 280,517 - -0.0 280,562 + +0.0 280,562 + +0.3 280,562 + +0.9 280,562 + -0.2 280,563 - -0.3 280,563 - -0.2 280,566 - +0.2 280,647 + PfGW456L13_235 0.16 +0.4 280,648 - PfGW456L13_235 0.16 +1.2 280,760 + PfGW456L13_235 0.30 +0.3 280,760 + PfGW456L13_235 0.30 +1.0 280,760 + PfGW456L13_235 0.30 +0.5 280,760 + PfGW456L13_235 0.30 -0.3 280,760 + PfGW456L13_235 0.30 +1.2 280,760 + PfGW456L13_235 0.30 -0.3 280,761 - PfGW456L13_235 0.30 -0.4 280,761 - PfGW456L13_235 0.30 -0.2 280,761 - PfGW456L13_235 0.30 -0.1 280,761 - PfGW456L13_235 0.30 -1.4 280,761 - PfGW456L13_235 0.30 +1.2 280,761 - PfGW456L13_235 0.30 +0.1 280,761 - PfGW456L13_235 0.30 -0.6 280,762 + PfGW456L13_235 0.30 -0.1 280,762 + PfGW456L13_235 0.30 +0.2 280,762 + PfGW456L13_235 0.30 -0.5 280,763 - PfGW456L13_235 0.30 -1.6 280,763 - PfGW456L13_235 0.30 +0.0 280,763 - PfGW456L13_235 0.30 -0.1 280,763 - PfGW456L13_235 0.30 +0.7 280,763 - PfGW456L13_235 0.30 -0.1 280,763 - PfGW456L13_235 0.30 -0.4 280,934 + PfGW456L13_235 0.51 +1.7 280,934 + PfGW456L13_235 0.51 +0.7 280,934 + PfGW456L13_235 0.51 +0.2 280,934 + PfGW456L13_235 0.51 +0.3 280,934 + PfGW456L13_235 0.51 -0.8 280,935 - PfGW456L13_235 0.51 +1.0 280,935 - PfGW456L13_235 0.51 -0.6 281,206 + PfGW456L13_235 0.85 -1.0 281,207 - PfGW456L13_235 0.85 +0.3 281,208 + PfGW456L13_235 0.85 -0.3 281,208 + PfGW456L13_235 0.85 +0.3 281,209 - PfGW456L13_235 0.85 -0.2 281,270 + +1.6 281,282 + -0.6 281,282 + -0.2 281,282 + +0.4 281,282 + -0.1 281,282 + +0.4 281,283 - +1.0 281,283 - -0.4 281,283 - -1.1 281,283 - +0.6 281,283 - -0.1 281,484 + PfGW456L13_236 0.64 +0.0 281,485 - PfGW456L13_236 0.64 +0.2 281,535 - PfGW456L13_236 0.83 +0.3
Or see this region's nucleotide sequence