Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_163 and PfGW456L13_164 are separated by 199 nucleotides PfGW456L13_164 and PfGW456L13_165 are separated by 2 nucleotides PfGW456L13_165 and PfGW456L13_166 overlap by 1 nucleotides PfGW456L13_166 and PfGW456L13_167 are separated by 51 nucleotides
PfGW456L13_163 - Ribosome small subunit-stimulated GTPase EngC, at 187,810 to 188,841
_163
PfGW456L13_164 - hypothetical protein, at 189,041 to 189,448
_164
PfGW456L13_165 - Peptidase C14, caspase catalytic subunit p20, at 189,451 to 190,410
_165
PfGW456L13_166 - hypothetical protein, at 190,410 to 190,901
_166
PfGW456L13_167 - Flagellar motor rotation protein MotB, at 190,953 to 191,999
_167
Position (kb) 189
190
191 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 188.801 kb on - strand at 188.839 kb on + strand at 188.839 kb on + strand at 188.904 kb on - strand at 188.922 kb on + strand at 188.922 kb on + strand at 188.922 kb on + strand at 188.923 kb on - strand at 188.923 kb on - strand at 188.923 kb on - strand at 188.923 kb on - strand at 188.945 kb on + strand at 188.946 kb on - strand at 188.977 kb on + strand at 188.978 kb on - strand at 188.988 kb on + strand at 188.989 kb on - strand at 188.989 kb on - strand at 188.996 kb on + strand at 188.997 kb on - strand at 188.997 kb on - strand at 189.003 kb on + strand at 189.003 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.040 kb on + strand at 189.041 kb on - strand at 189.041 kb on - strand at 189.041 kb on - strand at 189.041 kb on - strand at 189.041 kb on - strand at 189.041 kb on - strand at 189.050 kb on + strand at 189.051 kb on - strand at 189.051 kb on - strand at 189.051 kb on - strand at 189.080 kb on + strand at 189.081 kb on - strand at 189.081 kb on - strand at 189.081 kb on - strand at 189.137 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.260 kb on + strand, within PfGW456L13_164 at 189.261 kb on - strand, within PfGW456L13_164 at 189.261 kb on - strand, within PfGW456L13_164 at 189.261 kb on - strand, within PfGW456L13_164 at 189.269 kb on + strand, within PfGW456L13_164 at 189.269 kb on + strand, within PfGW456L13_164 at 189.270 kb on - strand, within PfGW456L13_164 at 189.270 kb on - strand, within PfGW456L13_164 at 189.270 kb on - strand, within PfGW456L13_164 at 189.270 kb on - strand, within PfGW456L13_164 at 189.270 kb on - strand, within PfGW456L13_164 at 189.369 kb on + strand, within PfGW456L13_164 at 189.369 kb on + strand, within PfGW456L13_164 at 189.369 kb on + strand, within PfGW456L13_164 at 189.369 kb on + strand, within PfGW456L13_164 at 189.370 kb on - strand, within PfGW456L13_164 at 189.370 kb on - strand, within PfGW456L13_164 at 189.370 kb on - strand, within PfGW456L13_164 at 189.370 kb on - strand, within PfGW456L13_164 at 189.437 kb on - strand at 189.437 kb on - strand at 189.437 kb on - strand at 189.446 kb on + strand at 189.446 kb on + strand at 189.446 kb on + strand at 189.447 kb on - strand at 189.447 kb on - strand at 189.484 kb on + strand at 189.484 kb on + strand at 189.484 kb on + strand at 189.484 kb on + strand at 189.485 kb on - strand at 189.679 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.742 kb on + strand, within PfGW456L13_165 at 189.743 kb on - strand, within PfGW456L13_165 at 189.743 kb on - strand, within PfGW456L13_165 at 189.743 kb on - strand, within PfGW456L13_165 at 189.743 kb on - strand, within PfGW456L13_165 at 189.743 kb on - strand, within PfGW456L13_165 at 189.924 kb on + strand, within PfGW456L13_165 at 189.925 kb on - strand, within PfGW456L13_165 at 190.042 kb on + strand, within PfGW456L13_165 at 190.043 kb on - strand, within PfGW456L13_165 at 190.198 kb on + strand, within PfGW456L13_165 at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.324 kb on + strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.325 kb on - strand at 190.327 kb on + strand at 190.327 kb on + strand at 190.327 kb on + strand at 190.327 kb on + strand at 190.327 kb on + strand at 190.327 kb on + strand at 190.328 kb on - strand at 190.328 kb on - strand at 190.328 kb on - strand at 190.379 kb on - strand at 190.422 kb on - strand at 190.422 kb on - strand at 190.428 kb on + strand at 190.497 kb on + strand, within PfGW456L13_166 at 190.497 kb on + strand, within PfGW456L13_166 at 190.497 kb on + strand, within PfGW456L13_166 at 190.498 kb on - strand, within PfGW456L13_166 at 190.507 kb on + strand, within PfGW456L13_166 at 190.507 kb on + strand, within PfGW456L13_166 at 190.508 kb on - strand, within PfGW456L13_166 at 190.508 kb on - strand, within PfGW456L13_166 at 190.508 kb on - strand at 190.563 kb on - strand, within PfGW456L13_166 at 190.563 kb on - strand, within PfGW456L13_166 at 190.592 kb on - strand, within PfGW456L13_166 at 190.637 kb on - strand, within PfGW456L13_166 at 190.704 kb on + strand, within PfGW456L13_166 at 190.705 kb on - strand, within PfGW456L13_166 at 190.764 kb on + strand, within PfGW456L13_166 at 190.838 kb on + strand, within PfGW456L13_166 at 190.899 kb on + strand at 190.900 kb on - strand at 190.900 kb on - strand at 190.900 kb on - strand at 190.904 kb on + strand at 191.380 kb on + strand, within PfGW456L13_167 at 191.380 kb on + strand, within PfGW456L13_167 at 191.380 kb on + strand, within PfGW456L13_167 at 191.380 kb on + strand, within PfGW456L13_167 at 191.380 kb on + strand, within PfGW456L13_167 at 191.381 kb on - strand, within PfGW456L13_167 at 191.381 kb on - strand, within PfGW456L13_167 at 191.381 kb on - strand, within PfGW456L13_167
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 188,801 - -3.0 188,839 + -0.9 188,839 + +1.6 188,904 - +0.3 188,922 + -0.1 188,922 + -0.1 188,922 + -2.1 188,923 - +0.5 188,923 - +0.1 188,923 - +0.4 188,923 - -0.9 188,945 + +1.1 188,946 - -1.5 188,977 + +0.2 188,978 - +0.7 188,988 + -0.4 188,989 - +0.0 188,989 - +0.1 188,996 + -0.2 188,997 - -1.0 188,997 - -1.1 189,003 + -0.9 189,003 + +0.4 189,040 + -1.6 189,040 + +0.3 189,040 + -0.6 189,040 + -0.9 189,040 + -0.1 189,040 + +0.2 189,040 + -0.4 189,040 + -0.0 189,040 + -0.8 189,040 + +0.3 189,040 + +0.6 189,040 + +0.2 189,040 + +0.2 189,041 - +0.5 189,041 - -0.1 189,041 - -0.9 189,041 - +0.1 189,041 - -0.5 189,041 - +1.6 189,050 + +0.2 189,051 - +0.2 189,051 - -0.1 189,051 - -0.7 189,080 + +0.1 189,081 - -0.1 189,081 - +0.5 189,081 - -0.6 189,137 + PfGW456L13_164 0.24 -0.6 189,260 + PfGW456L13_164 0.54 +0.7 189,260 + PfGW456L13_164 0.54 +0.7 189,260 + PfGW456L13_164 0.54 -1.6 189,260 + PfGW456L13_164 0.54 -0.0 189,260 + PfGW456L13_164 0.54 +0.4 189,260 + PfGW456L13_164 0.54 -0.2 189,261 - PfGW456L13_164 0.54 +1.2 189,261 - PfGW456L13_164 0.54 -0.1 189,261 - PfGW456L13_164 0.54 +0.4 189,269 + PfGW456L13_164 0.56 +0.7 189,269 + PfGW456L13_164 0.56 +0.4 189,270 - PfGW456L13_164 0.56 -0.0 189,270 - PfGW456L13_164 0.56 -0.8 189,270 - PfGW456L13_164 0.56 +1.0 189,270 - PfGW456L13_164 0.56 +0.0 189,270 - PfGW456L13_164 0.56 -0.6 189,369 + PfGW456L13_164 0.80 +0.2 189,369 + PfGW456L13_164 0.80 +2.8 189,369 + PfGW456L13_164 0.80 +0.5 189,369 + PfGW456L13_164 0.80 -0.2 189,370 - PfGW456L13_164 0.81 -0.2 189,370 - PfGW456L13_164 0.81 -1.6 189,370 - PfGW456L13_164 0.81 -0.3 189,370 - PfGW456L13_164 0.81 +0.0 189,437 - +0.3 189,437 - -0.5 189,437 - -0.8 189,446 + +0.0 189,446 + -0.1 189,446 + -0.3 189,447 - -0.3 189,447 - -0.3 189,484 + -0.1 189,484 + +0.5 189,484 + -1.7 189,484 + +1.3 189,485 - -0.8 189,679 + PfGW456L13_165 0.24 +0.2 189,742 + PfGW456L13_165 0.30 +0.1 189,742 + PfGW456L13_165 0.30 +0.8 189,742 + PfGW456L13_165 0.30 +0.4 189,742 + PfGW456L13_165 0.30 +0.1 189,742 + PfGW456L13_165 0.30 +0.1 189,742 + PfGW456L13_165 0.30 -0.1 189,743 - PfGW456L13_165 0.30 -0.1 189,743 - PfGW456L13_165 0.30 +1.6 189,743 - PfGW456L13_165 0.30 -1.8 189,743 - PfGW456L13_165 0.30 +0.7 189,743 - PfGW456L13_165 0.30 -0.3 189,924 + PfGW456L13_165 0.49 +2.5 189,925 - PfGW456L13_165 0.49 -1.0 190,042 + PfGW456L13_165 0.62 +0.7 190,043 - PfGW456L13_165 0.62 +0.2 190,198 + PfGW456L13_165 0.78 +0.2 190,324 + +0.5 190,324 + +0.6 190,324 + +1.0 190,324 + -0.4 190,324 + -0.1 190,324 + +1.1 190,324 + +0.3 190,324 + +0.3 190,324 + +0.6 190,324 + -0.6 190,324 + +0.8 190,324 + -0.0 190,324 + +0.4 190,325 - +0.4 190,325 - -0.3 190,325 - -0.2 190,325 - -0.8 190,325 - -0.7 190,325 - +0.0 190,325 - +0.0 190,325 - +0.1 190,325 - -0.0 190,325 - -0.2 190,325 - +1.0 190,325 - -1.0 190,325 - +0.8 190,327 + -0.3 190,327 + +0.0 190,327 + -1.7 190,327 + +1.0 190,327 + -0.5 190,327 + +0.1 190,328 - +0.3 190,328 - +0.6 190,328 - -0.1 190,379 - -0.7 190,422 - -0.1 190,422 - +0.5 190,428 + +0.8 190,497 + PfGW456L13_166 0.18 +0.0 190,497 + PfGW456L13_166 0.18 -0.6 190,497 + PfGW456L13_166 0.18 -1.0 190,498 - PfGW456L13_166 0.18 +0.3 190,507 + PfGW456L13_166 0.20 +0.5 190,507 + PfGW456L13_166 0.20 -0.7 190,508 - PfGW456L13_166 0.20 -0.9 190,508 - PfGW456L13_166 0.20 +0.2 190,508 - -0.4 190,563 - PfGW456L13_166 0.31 -0.7 190,563 - PfGW456L13_166 0.31 +0.7 190,592 - PfGW456L13_166 0.37 -0.3 190,637 - PfGW456L13_166 0.46 -0.2 190,704 + PfGW456L13_166 0.60 +0.0 190,705 - PfGW456L13_166 0.60 +0.3 190,764 + PfGW456L13_166 0.72 -0.9 190,838 + PfGW456L13_166 0.87 +0.7 190,899 + +0.4 190,900 - -0.0 190,900 - +0.4 190,900 - -0.2 190,904 + +0.0 191,380 + PfGW456L13_167 0.41 -1.7 191,380 + PfGW456L13_167 0.41 +0.6 191,380 + PfGW456L13_167 0.41 -0.2 191,380 + PfGW456L13_167 0.41 -0.9 191,380 + PfGW456L13_167 0.41 +0.4 191,381 - PfGW456L13_167 0.41 +0.5 191,381 - PfGW456L13_167 0.41 -0.1 191,381 - PfGW456L13_167 0.41 -0.2
Or see this region's nucleotide sequence