Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1569 and PfGW456L13_1570 are separated by 3 nucleotides PfGW456L13_1570 and PfGW456L13_1571 overlap by 12 nucleotides PfGW456L13_1571 and PfGW456L13_1572 are separated by 15 nucleotides
PfGW456L13_1569 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 1,732,548 to 1,733,666
_1569
PfGW456L13_1570 - hypothetical protein, at 1,733,670 to 1,733,906
_1570
PfGW456L13_1571 - Glycine cleavage system transcriptional activator, at 1,733,895 to 1,734,800
_1571
PfGW456L13_1572 - Methyl-accepting chemotaxis protein, at 1,734,816 to 1,736,873
_1572
Position (kb)
1733
1734 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1732.684 kb on + strand, within PfGW456L13_1569 at 1732.705 kb on + strand, within PfGW456L13_1569 at 1732.705 kb on + strand, within PfGW456L13_1569 at 1732.705 kb on + strand, within PfGW456L13_1569 at 1732.706 kb on - strand, within PfGW456L13_1569 at 1732.892 kb on + strand, within PfGW456L13_1569 at 1732.893 kb on - strand, within PfGW456L13_1569 at 1732.893 kb on - strand, within PfGW456L13_1569 at 1732.893 kb on - strand, within PfGW456L13_1569 at 1732.954 kb on + strand, within PfGW456L13_1569 at 1732.954 kb on + strand, within PfGW456L13_1569 at 1732.954 kb on + strand, within PfGW456L13_1569 at 1732.954 kb on + strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1732.955 kb on - strand, within PfGW456L13_1569 at 1733.380 kb on + strand, within PfGW456L13_1569 at 1733.381 kb on - strand, within PfGW456L13_1569 at 1733.381 kb on - strand, within PfGW456L13_1569 at 1733.443 kb on + strand, within PfGW456L13_1569 at 1733.605 kb on + strand at 1733.605 kb on + strand at 1733.606 kb on - strand at 1733.606 kb on - strand at 1733.606 kb on - strand at 1733.606 kb on - strand at 1733.606 kb on - strand at 1733.606 kb on - strand at 1733.672 kb on - strand at 1733.733 kb on + strand, within PfGW456L13_1570 at 1733.734 kb on - strand, within PfGW456L13_1570 at 1733.734 kb on - strand, within PfGW456L13_1570 at 1733.736 kb on + strand, within PfGW456L13_1570 at 1733.736 kb on + strand, within PfGW456L13_1570 at 1733.737 kb on - strand, within PfGW456L13_1570 at 1733.776 kb on - strand, within PfGW456L13_1570 at 1733.776 kb on - strand, within PfGW456L13_1570 at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.964 kb on + strand at 1733.965 kb on - strand at 1733.965 kb on - strand at 1733.965 kb on - strand at 1733.965 kb on - strand at 1733.965 kb on - strand at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.102 kb on + strand, within PfGW456L13_1571 at 1734.103 kb on - strand, within PfGW456L13_1571 at 1734.103 kb on - strand, within PfGW456L13_1571 at 1734.103 kb on - strand, within PfGW456L13_1571 at 1734.103 kb on - strand, within PfGW456L13_1571 at 1734.103 kb on - strand, within PfGW456L13_1571 at 1734.414 kb on + strand, within PfGW456L13_1571 at 1734.414 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.552 kb on + strand, within PfGW456L13_1571 at 1734.553 kb on - strand, within PfGW456L13_1571 at 1734.553 kb on - strand, within PfGW456L13_1571 at 1734.690 kb on + strand, within PfGW456L13_1571 at 1734.849 kb on + strand at 1734.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 1,732,684 + PfGW456L13_1569 0.12 +0.6 1,732,705 + PfGW456L13_1569 0.14 -0.1 1,732,705 + PfGW456L13_1569 0.14 -0.5 1,732,705 + PfGW456L13_1569 0.14 -1.2 1,732,706 - PfGW456L13_1569 0.14 +0.6 1,732,892 + PfGW456L13_1569 0.31 +0.6 1,732,893 - PfGW456L13_1569 0.31 +0.1 1,732,893 - PfGW456L13_1569 0.31 -0.7 1,732,893 - PfGW456L13_1569 0.31 +0.2 1,732,954 + PfGW456L13_1569 0.36 -0.5 1,732,954 + PfGW456L13_1569 0.36 +1.1 1,732,954 + PfGW456L13_1569 0.36 +1.5 1,732,954 + PfGW456L13_1569 0.36 -0.4 1,732,955 - PfGW456L13_1569 0.36 +0.5 1,732,955 - PfGW456L13_1569 0.36 +0.0 1,732,955 - PfGW456L13_1569 0.36 +0.5 1,732,955 - PfGW456L13_1569 0.36 -0.3 1,732,955 - PfGW456L13_1569 0.36 +0.1 1,732,955 - PfGW456L13_1569 0.36 -2.1 1,732,955 - PfGW456L13_1569 0.36 +0.1 1,733,380 + PfGW456L13_1569 0.74 -0.8 1,733,381 - PfGW456L13_1569 0.74 -0.0 1,733,381 - PfGW456L13_1569 0.74 -0.7 1,733,443 + PfGW456L13_1569 0.80 +0.7 1,733,605 + -0.6 1,733,605 + +0.6 1,733,606 - +0.0 1,733,606 - -0.7 1,733,606 - +1.0 1,733,606 - +0.5 1,733,606 - -0.0 1,733,606 - +0.6 1,733,672 - -0.7 1,733,733 + PfGW456L13_1570 0.27 +0.3 1,733,734 - PfGW456L13_1570 0.27 -0.5 1,733,734 - PfGW456L13_1570 0.27 -0.4 1,733,736 + PfGW456L13_1570 0.28 -0.5 1,733,736 + PfGW456L13_1570 0.28 +1.1 1,733,737 - PfGW456L13_1570 0.28 +0.3 1,733,776 - PfGW456L13_1570 0.45 +0.7 1,733,776 - PfGW456L13_1570 0.45 +1.9 1,733,964 + +0.8 1,733,964 + +0.8 1,733,964 + +0.3 1,733,964 + -0.6 1,733,964 + +0.5 1,733,964 + -0.7 1,733,964 + +0.5 1,733,964 + -0.7 1,733,964 + -0.0 1,733,964 + -0.3 1,733,964 + +0.2 1,733,965 - +0.2 1,733,965 - -0.3 1,733,965 - -0.4 1,733,965 - +0.4 1,733,965 - +0.2 1,734,102 + PfGW456L13_1571 0.23 -0.2 1,734,102 + PfGW456L13_1571 0.23 +0.6 1,734,102 + PfGW456L13_1571 0.23 +1.5 1,734,102 + PfGW456L13_1571 0.23 -0.2 1,734,102 + PfGW456L13_1571 0.23 -0.4 1,734,102 + PfGW456L13_1571 0.23 +0.5 1,734,103 - PfGW456L13_1571 0.23 -0.6 1,734,103 - PfGW456L13_1571 0.23 -2.2 1,734,103 - PfGW456L13_1571 0.23 +0.9 1,734,103 - PfGW456L13_1571 0.23 -1.1 1,734,103 - PfGW456L13_1571 0.23 -0.9 1,734,414 + PfGW456L13_1571 0.57 +0.4 1,734,414 + PfGW456L13_1571 0.57 +0.4 1,734,552 + PfGW456L13_1571 0.73 +0.2 1,734,552 + PfGW456L13_1571 0.73 +0.6 1,734,552 + PfGW456L13_1571 0.73 -0.6 1,734,552 + PfGW456L13_1571 0.73 -0.9 1,734,552 + PfGW456L13_1571 0.73 -0.9 1,734,552 + PfGW456L13_1571 0.73 -0.1 1,734,553 - PfGW456L13_1571 0.73 -0.1 1,734,553 - PfGW456L13_1571 0.73 -0.3 1,734,690 + PfGW456L13_1571 0.88 -1.7 1,734,849 + +0.5 1,734,850 - +0.7
Or see this region's nucleotide sequence