Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01175 and AO356_01180 overlap by 4 nucleotides AO356_01180 and AO356_01185 overlap by 8 nucleotides AO356_01185 and AO356_01190 are separated by 12 nucleotides
AO356_01175: AO356_01175 - polymerase, at 269,236 to 270,606
_01175
AO356_01180: AO356_01180 - glycosyl transferase family 2, at 270,603 to 271,562
_01180
AO356_01185: AO356_01185 - glycosyl transferase family 2, at 271,555 to 272,691
_01185
AO356_01190: AO356_01190 - polysaccharide deacetylase, at 272,704 to 273,708
_01190
Position (kb) 271
272
273 Strain fitness (log2 ratio) -1
0
1 at 270.633 kb on + strand at 270.634 kb on - strand at 271.586 kb on + strand at 271.598 kb on - strand at 271.598 kb on - strand at 271.598 kb on - strand at 272.075 kb on - strand, within AO356_01185 at 272.083 kb on + strand, within AO356_01185 at 272.084 kb on - strand, within AO356_01185 at 272.249 kb on - strand, within AO356_01185 at 272.494 kb on + strand, within AO356_01185 at 272.495 kb on - strand, within AO356_01185 at 272.747 kb on - strand at 273.253 kb on + strand, within AO356_01190 at 273.253 kb on + strand, within AO356_01190 at 273.253 kb on + strand, within AO356_01190 at 273.505 kb on + strand, within AO356_01190 at 273.505 kb on + strand, within AO356_01190 at 273.505 kb on + strand, within AO356_01190 at 273.506 kb on - strand, within AO356_01190 at 273.506 kb on - strand, within AO356_01190 at 273.506 kb on - strand, within AO356_01190 at 273.671 kb on + strand at 273.671 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 270,633 + +0.2 270,634 - -0.3 271,586 + -1.0 271,598 - +0.0 271,598 - +0.5 271,598 - -0.0 272,075 - AO356_01185 0.46 +0.7 272,083 + AO356_01185 0.46 +0.2 272,084 - AO356_01185 0.47 +0.9 272,249 - AO356_01185 0.61 +0.8 272,494 + AO356_01185 0.83 +0.3 272,495 - AO356_01185 0.83 +0.3 272,747 - -1.4 273,253 + AO356_01190 0.55 +0.6 273,253 + AO356_01190 0.55 +0.7 273,253 + AO356_01190 0.55 -0.2 273,505 + AO356_01190 0.80 +0.5 273,505 + AO356_01190 0.80 +0.2 273,505 + AO356_01190 0.80 +0.0 273,506 - AO356_01190 0.80 -0.0 273,506 - AO356_01190 0.80 +0.6 273,506 - AO356_01190 0.80 +0.3 273,671 + +0.3 273,671 + +0.8
Or see this region's nucleotide sequence