Strain Fitness in Sinorhizobium meliloti 1021 around SMc03235
Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.05 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,344,375 | + | +0.4 | |||
| 3,344,375 | + | -0.1 | |||
| 3,344,563 | + | SMc03235 | 0.35 | -0.9 | |
| 3,344,563 | + | SMc03235 | 0.35 | +0.1 | |
| 3,344,563 | + | SMc03235 | 0.35 | -0.3 | |
| 3,344,564 | - | SMc03235 | 0.35 | -1.7 | |
| 3,344,564 | - | SMc03235 | 0.35 | -1.4 | |
| 3,344,639 | - | SMc03235 | 0.51 | -1.3 | |
| 3,344,657 | + | SMc03235 | 0.55 | -0.4 | |
| 3,344,658 | - | SMc03235 | 0.55 | -0.9 | |
| 3,345,309 | + | SMc03236 | 0.57 | +0.7 | |
| 3,345,309 | + | SMc03236 | 0.57 | +0.3 | |
| 3,345,375 | + | SMc03236 | 0.66 | -0.1 |
Or see this region's nucleotide sequence