Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3784 and EX28DRAFT_3785 are separated by 106 nucleotides EX28DRAFT_3785 and EX28DRAFT_3786 are separated by 40 nucleotides EX28DRAFT_3786 and EX28DRAFT_3787 overlap by 8 nucleotides
EX28DRAFT_3784: EX28DRAFT_3784 - hypothetical protein, at 466,037 to 466,441
_3784
EX28DRAFT_3785: EX28DRAFT_3785 - lipoprotein, YaeC family, at 466,548 to 467,363
_3785
EX28DRAFT_3786: EX28DRAFT_3786 - ABC-type metal ion transport system, permease component, at 467,404 to 468,057
_3786
EX28DRAFT_3787: EX28DRAFT_3787 - D-methionine ABC transporter, ATP-binding protein, at 468,050 to 469,081
_3787
Position (kb) 467
468
469 Strain fitness (log2 ratio) -1
0
1
2
3 at 466.441 kb on + strand at 466.444 kb on + strand at 466.444 kb on + strand at 466.445 kb on - strand at 466.445 kb on - strand at 466.445 kb on - strand at 466.476 kb on - strand at 466.514 kb on - strand at 466.530 kb on + strand at 466.533 kb on + strand at 466.533 kb on + strand at 466.533 kb on + strand at 466.534 kb on - strand at 466.534 kb on - strand at 466.534 kb on - strand at 466.559 kb on + strand at 466.615 kb on + strand at 466.616 kb on - strand at 466.697 kb on + strand, within EX28DRAFT_3785 at 466.750 kb on + strand, within EX28DRAFT_3785 at 466.751 kb on - strand, within EX28DRAFT_3785 at 466.751 kb on - strand, within EX28DRAFT_3785 at 467.061 kb on - strand, within EX28DRAFT_3785 at 467.092 kb on + strand, within EX28DRAFT_3785 at 467.092 kb on + strand, within EX28DRAFT_3785 at 467.100 kb on - strand, within EX28DRAFT_3785 at 467.158 kb on + strand, within EX28DRAFT_3785 at 467.158 kb on + strand, within EX28DRAFT_3785 at 467.194 kb on + strand, within EX28DRAFT_3785 at 467.194 kb on + strand, within EX28DRAFT_3785 at 467.195 kb on - strand, within EX28DRAFT_3785 at 467.264 kb on + strand, within EX28DRAFT_3785 at 467.331 kb on + strand at 467.332 kb on - strand at 467.350 kb on - strand at 467.355 kb on - strand at 467.374 kb on + strand at 467.399 kb on + strand at 467.405 kb on + strand at 467.456 kb on + strand at 467.456 kb on + strand at 467.505 kb on + strand, within EX28DRAFT_3786 at 467.505 kb on + strand, within EX28DRAFT_3786 at 467.506 kb on - strand, within EX28DRAFT_3786 at 467.506 kb on - strand, within EX28DRAFT_3786 at 467.507 kb on + strand, within EX28DRAFT_3786 at 467.515 kb on - strand, within EX28DRAFT_3786 at 467.517 kb on - strand, within EX28DRAFT_3786 at 467.764 kb on + strand, within EX28DRAFT_3786 at 467.765 kb on - strand, within EX28DRAFT_3786 at 467.863 kb on - strand, within EX28DRAFT_3786 at 467.863 kb on - strand, within EX28DRAFT_3786 at 467.943 kb on - strand, within EX28DRAFT_3786 at 467.943 kb on - strand, within EX28DRAFT_3786 at 467.943 kb on - strand, within EX28DRAFT_3786 at 467.951 kb on - strand, within EX28DRAFT_3786 at 468.057 kb on + strand at 468.058 kb on - strand at 468.077 kb on + strand at 468.078 kb on - strand at 468.078 kb on - strand at 468.175 kb on - strand, within EX28DRAFT_3787 at 468.407 kb on + strand, within EX28DRAFT_3787 at 468.408 kb on - strand, within EX28DRAFT_3787 at 468.490 kb on + strand, within EX28DRAFT_3787 at 468.490 kb on + strand, within EX28DRAFT_3787 at 468.491 kb on - strand, within EX28DRAFT_3787 at 468.491 kb on - strand, within EX28DRAFT_3787 at 468.491 kb on - strand, within EX28DRAFT_3787 at 468.491 kb on - strand, within EX28DRAFT_3787 at 468.493 kb on + strand, within EX28DRAFT_3787 at 468.493 kb on + strand, within EX28DRAFT_3787 at 468.494 kb on - strand, within EX28DRAFT_3787 at 468.599 kb on + strand, within EX28DRAFT_3787 at 468.676 kb on + strand, within EX28DRAFT_3787 at 468.896 kb on + strand, within EX28DRAFT_3787 at 468.952 kb on + strand, within EX28DRAFT_3787 at 468.953 kb on - strand, within EX28DRAFT_3787
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 466,441 + -0.2 466,444 + -0.0 466,444 + +0.5 466,445 - -0.0 466,445 - +0.0 466,445 - +0.2 466,476 - -0.1 466,514 - -0.2 466,530 + +0.3 466,533 + -0.2 466,533 + -0.3 466,533 + +0.9 466,534 - +2.1 466,534 - +3.5 466,534 - +0.5 466,559 + +0.1 466,615 + +0.3 466,616 - +0.8 466,697 + EX28DRAFT_3785 0.18 +0.1 466,750 + EX28DRAFT_3785 0.25 -0.7 466,751 - EX28DRAFT_3785 0.25 +0.6 466,751 - EX28DRAFT_3785 0.25 +0.4 467,061 - EX28DRAFT_3785 0.63 -0.1 467,092 + EX28DRAFT_3785 0.67 +0.3 467,092 + EX28DRAFT_3785 0.67 -1.6 467,100 - EX28DRAFT_3785 0.68 +0.4 467,158 + EX28DRAFT_3785 0.75 +0.1 467,158 + EX28DRAFT_3785 0.75 -1.7 467,194 + EX28DRAFT_3785 0.79 +0.4 467,194 + EX28DRAFT_3785 0.79 -0.2 467,195 - EX28DRAFT_3785 0.79 -0.1 467,264 + EX28DRAFT_3785 0.88 +0.1 467,331 + +0.2 467,332 - -0.7 467,350 - +0.6 467,355 - +0.5 467,374 + +0.0 467,399 + -0.2 467,405 + -0.2 467,456 + -0.8 467,456 + +1.9 467,505 + EX28DRAFT_3786 0.15 +0.6 467,505 + EX28DRAFT_3786 0.15 -0.1 467,506 - EX28DRAFT_3786 0.16 +0.7 467,506 - EX28DRAFT_3786 0.16 +0.1 467,507 + EX28DRAFT_3786 0.16 -0.1 467,515 - EX28DRAFT_3786 0.17 -1.0 467,517 - EX28DRAFT_3786 0.17 -0.3 467,764 + EX28DRAFT_3786 0.55 +0.4 467,765 - EX28DRAFT_3786 0.55 +0.0 467,863 - EX28DRAFT_3786 0.70 -0.6 467,863 - EX28DRAFT_3786 0.70 -0.1 467,943 - EX28DRAFT_3786 0.82 -0.3 467,943 - EX28DRAFT_3786 0.82 -0.2 467,943 - EX28DRAFT_3786 0.82 -0.1 467,951 - EX28DRAFT_3786 0.84 +0.6 468,057 + +0.2 468,058 - -0.2 468,077 + -0.4 468,078 - +0.9 468,078 - -0.1 468,175 - EX28DRAFT_3787 0.12 -0.6 468,407 + EX28DRAFT_3787 0.35 +1.3 468,408 - EX28DRAFT_3787 0.35 +0.6 468,490 + EX28DRAFT_3787 0.43 -0.2 468,490 + EX28DRAFT_3787 0.43 +0.3 468,491 - EX28DRAFT_3787 0.43 +0.2 468,491 - EX28DRAFT_3787 0.43 -0.6 468,491 - EX28DRAFT_3787 0.43 -0.5 468,491 - EX28DRAFT_3787 0.43 +0.5 468,493 + EX28DRAFT_3787 0.43 +0.0 468,493 + EX28DRAFT_3787 0.43 -0.1 468,494 - EX28DRAFT_3787 0.43 +0.1 468,599 + EX28DRAFT_3787 0.53 +0.5 468,676 + EX28DRAFT_3787 0.61 -0.2 468,896 + EX28DRAFT_3787 0.82 -0.5 468,952 + EX28DRAFT_3787 0.87 -0.1 468,953 - EX28DRAFT_3787 0.88 -0.3
Or see this region's nucleotide sequence