Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2064 and EX28DRAFT_2065 are separated by 92 nucleotides EX28DRAFT_2065 and EX28DRAFT_2066 are separated by 69 nucleotides
EX28DRAFT_2064: EX28DRAFT_2064 - Predicted nucleoside-diphosphate-sugar epimerases, at 2,087,683 to 2,089,119
_2064
EX28DRAFT_2065: EX28DRAFT_2065 - Nucleoside-diphosphate-sugar epimerases, at 2,089,212 to 2,090,225
_2065
EX28DRAFT_2066: EX28DRAFT_2066 - Uncharacterized protein contain chitin-binding domain type 3, at 2,090,295 to 2,092,124
_2066
Position (kb)
2089
2090
2091 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.250 kb on + strand, within EX28DRAFT_2064 at 2088.326 kb on - strand, within EX28DRAFT_2064 at 2089.122 kb on - strand at 2089.211 kb on + strand at 2089.211 kb on + strand at 2089.539 kb on - strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.544 kb on + strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.545 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.692 kb on - strand, within EX28DRAFT_2065 at 2089.749 kb on - strand, within EX28DRAFT_2065 at 2089.779 kb on + strand, within EX28DRAFT_2065 at 2089.830 kb on + strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.831 kb on - strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.905 kb on + strand, within EX28DRAFT_2065 at 2089.957 kb on + strand, within EX28DRAFT_2065 at 2090.049 kb on - strand, within EX28DRAFT_2065 at 2090.087 kb on - strand, within EX28DRAFT_2065 at 2090.097 kb on - strand, within EX28DRAFT_2065 at 2090.377 kb on + strand at 2090.503 kb on - strand, within EX28DRAFT_2066 at 2090.515 kb on + strand, within EX28DRAFT_2066 at 2090.516 kb on - strand, within EX28DRAFT_2066 at 2090.516 kb on - strand, within EX28DRAFT_2066 at 2090.603 kb on + strand, within EX28DRAFT_2066 at 2090.604 kb on - strand, within EX28DRAFT_2066 at 2090.657 kb on + strand, within EX28DRAFT_2066 at 2090.657 kb on + strand, within EX28DRAFT_2066 at 2090.659 kb on + strand, within EX28DRAFT_2066 at 2090.659 kb on + strand, within EX28DRAFT_2066 at 2090.660 kb on - strand, within EX28DRAFT_2066 at 2090.786 kb on + strand, within EX28DRAFT_2066 at 2090.787 kb on - strand, within EX28DRAFT_2066 at 2090.787 kb on - strand, within EX28DRAFT_2066 at 2090.932 kb on + strand, within EX28DRAFT_2066 at 2090.932 kb on + strand, within EX28DRAFT_2066 at 2090.933 kb on - strand, within EX28DRAFT_2066 at 2090.933 kb on - strand, within EX28DRAFT_2066 at 2090.953 kb on + strand, within EX28DRAFT_2066 at 2090.954 kb on - strand, within EX28DRAFT_2066 at 2090.954 kb on - strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.010 kb on + strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.011 kb on - strand, within EX28DRAFT_2066 at 2091.170 kb on - strand, within EX28DRAFT_2066 at 2091.170 kb on - strand, within EX28DRAFT_2066
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,088,250 + EX28DRAFT_2064 0.39 -0.2 2,088,250 + EX28DRAFT_2064 0.39 +0.1 2,088,326 - EX28DRAFT_2064 0.45 +0.6 2,089,122 - -0.3 2,089,211 + -0.6 2,089,211 + +0.9 2,089,539 - EX28DRAFT_2065 0.32 -2.4 2,089,544 + EX28DRAFT_2065 0.33 +0.4 2,089,544 + EX28DRAFT_2065 0.33 -0.2 2,089,545 - EX28DRAFT_2065 0.33 -1.2 2,089,545 - EX28DRAFT_2065 0.33 -1.1 2,089,692 - EX28DRAFT_2065 0.47 -0.0 2,089,692 - EX28DRAFT_2065 0.47 -0.5 2,089,749 - EX28DRAFT_2065 0.53 +0.1 2,089,779 + EX28DRAFT_2065 0.56 -0.3 2,089,830 + EX28DRAFT_2065 0.61 -0.4 2,089,831 - EX28DRAFT_2065 0.61 +0.5 2,089,831 - EX28DRAFT_2065 0.61 +0.0 2,089,831 - EX28DRAFT_2065 0.61 +0.8 2,089,905 + EX28DRAFT_2065 0.68 -0.8 2,089,905 + EX28DRAFT_2065 0.68 -0.3 2,089,905 + EX28DRAFT_2065 0.68 +0.1 2,089,957 + EX28DRAFT_2065 0.73 +0.5 2,090,049 - EX28DRAFT_2065 0.83 -0.0 2,090,087 - EX28DRAFT_2065 0.86 -0.1 2,090,097 - EX28DRAFT_2065 0.87 +0.2 2,090,377 + -0.0 2,090,503 - EX28DRAFT_2066 0.11 +0.5 2,090,515 + EX28DRAFT_2066 0.12 -0.4 2,090,516 - EX28DRAFT_2066 0.12 +0.3 2,090,516 - EX28DRAFT_2066 0.12 -0.0 2,090,603 + EX28DRAFT_2066 0.17 -0.3 2,090,604 - EX28DRAFT_2066 0.17 +0.6 2,090,657 + EX28DRAFT_2066 0.20 +0.3 2,090,657 + EX28DRAFT_2066 0.20 +0.3 2,090,659 + EX28DRAFT_2066 0.20 -0.8 2,090,659 + EX28DRAFT_2066 0.20 +0.2 2,090,660 - EX28DRAFT_2066 0.20 -0.6 2,090,786 + EX28DRAFT_2066 0.27 -0.3 2,090,787 - EX28DRAFT_2066 0.27 -0.3 2,090,787 - EX28DRAFT_2066 0.27 +0.2 2,090,932 + EX28DRAFT_2066 0.35 -0.5 2,090,932 + EX28DRAFT_2066 0.35 -0.2 2,090,933 - EX28DRAFT_2066 0.35 +1.0 2,090,933 - EX28DRAFT_2066 0.35 +0.1 2,090,953 + EX28DRAFT_2066 0.36 -0.5 2,090,954 - EX28DRAFT_2066 0.36 +0.4 2,090,954 - EX28DRAFT_2066 0.36 +0.4 2,091,010 + EX28DRAFT_2066 0.39 -3.2 2,091,010 + EX28DRAFT_2066 0.39 +0.1 2,091,010 + EX28DRAFT_2066 0.39 -0.7 2,091,011 - EX28DRAFT_2066 0.39 -0.2 2,091,011 - EX28DRAFT_2066 0.39 -0.0 2,091,011 - EX28DRAFT_2066 0.39 +1.7 2,091,170 - EX28DRAFT_2066 0.48 +0.1 2,091,170 - EX28DRAFT_2066 0.48 -0.2
Or see this region's nucleotide sequence