Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0911 and EX28DRAFT_0912 are separated by 12 nucleotides EX28DRAFT_0912 and EX28DRAFT_0913 are separated by 60 nucleotides EX28DRAFT_0913 and EX28DRAFT_0914 are separated by 32 nucleotides EX28DRAFT_0914 and EX28DRAFT_0915 overlap by 11 nucleotides
EX28DRAFT_0911: EX28DRAFT_0911 - Phage tail sheath protein FI, at 913,857 to 915,050
_0911
EX28DRAFT_0912: EX28DRAFT_0912 - phage contractile tail tube protein, P2 family, at 915,063 to 915,581
_0912
EX28DRAFT_0913: EX28DRAFT_0913 - Mu-like prophage FluMu protein gp41, at 915,642 to 915,950
_0913
EX28DRAFT_0914: EX28DRAFT_0914 - Phage P2 GpE, at 915,983 to 916,105
_0914
EX28DRAFT_0915: EX28DRAFT_0915 - phage tail tape measure protein, TP901 family, core region, at 916,095 to 918,542
_0915
Position (kb) 915
916
917 Strain fitness (log2 ratio) -1
0
1 at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.071 kb on - strand at 915.087 kb on + strand at 915.117 kb on + strand, within EX28DRAFT_0912 at 915.118 kb on - strand, within EX28DRAFT_0912 at 915.360 kb on - strand, within EX28DRAFT_0912 at 915.403 kb on - strand, within EX28DRAFT_0912 at 915.465 kb on + strand, within EX28DRAFT_0912 at 915.465 kb on + strand, within EX28DRAFT_0912 at 915.616 kb on + strand at 915.616 kb on + strand at 915.616 kb on + strand at 915.617 kb on - strand at 915.846 kb on + strand, within EX28DRAFT_0913 at 916.002 kb on + strand, within EX28DRAFT_0914 at 916.002 kb on + strand, within EX28DRAFT_0914 at 916.026 kb on + strand, within EX28DRAFT_0914 at 916.163 kb on + strand at 916.301 kb on + strand at 916.302 kb on - strand at 916.302 kb on - strand at 916.425 kb on + strand, within EX28DRAFT_0915 at 916.426 kb on - strand, within EX28DRAFT_0915 at 916.426 kb on - strand, within EX28DRAFT_0915 at 916.484 kb on + strand, within EX28DRAFT_0915 at 916.484 kb on + strand, within EX28DRAFT_0915 at 916.485 kb on - strand, within EX28DRAFT_0915 at 916.878 kb on - strand, within EX28DRAFT_0915 at 916.878 kb on - strand, within EX28DRAFT_0915 at 916.878 kb on - strand, within EX28DRAFT_0915 at 916.953 kb on - strand, within EX28DRAFT_0915
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 915,015 + -1.5 915,015 + -0.7 915,015 + +0.6 915,015 + -0.1 915,015 + +0.1 915,071 - +1.5 915,087 + +0.2 915,117 + EX28DRAFT_0912 0.10 +0.2 915,118 - EX28DRAFT_0912 0.11 -0.2 915,360 - EX28DRAFT_0912 0.57 -1.7 915,403 - EX28DRAFT_0912 0.66 -0.0 915,465 + EX28DRAFT_0912 0.77 +0.5 915,465 + EX28DRAFT_0912 0.77 +0.1 915,616 + +0.0 915,616 + -1.1 915,616 + -0.2 915,617 - -1.1 915,846 + EX28DRAFT_0913 0.66 -0.1 916,002 + EX28DRAFT_0914 0.15 +0.6 916,002 + EX28DRAFT_0914 0.15 +0.3 916,026 + EX28DRAFT_0914 0.35 -0.5 916,163 + -0.0 916,301 + +1.2 916,302 - -0.6 916,302 - -0.3 916,425 + EX28DRAFT_0915 0.13 -0.2 916,426 - EX28DRAFT_0915 0.14 -1.1 916,426 - EX28DRAFT_0915 0.14 -1.1 916,484 + EX28DRAFT_0915 0.16 +0.1 916,484 + EX28DRAFT_0915 0.16 +0.4 916,485 - EX28DRAFT_0915 0.16 +0.6 916,878 - EX28DRAFT_0915 0.32 +0.2 916,878 - EX28DRAFT_0915 0.32 +0.1 916,878 - EX28DRAFT_0915 0.32 -0.5 916,953 - EX28DRAFT_0915 0.35 -0.1
Or see this region's nucleotide sequence