Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0528 and EX28DRAFT_0529 are separated by 146 nucleotides EX28DRAFT_0529 and EX28DRAFT_0530 are separated by 226 nucleotides
EX28DRAFT_0528: EX28DRAFT_0528 - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase, at 521,406 to 522,872
_0528
EX28DRAFT_0529: EX28DRAFT_0529 - 6-phosphogluconate dehydrogenase (decarboxylating), at 523,019 to 524,425
_0529
EX28DRAFT_0530: EX28DRAFT_0530 - nucleotide sugar dehydrogenase, at 524,652 to 525,818
_0530
Position (kb) 523
524
525 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 522.123 kb on + strand, within EX28DRAFT_0528 at 522.743 kb on + strand at 522.810 kb on + strand at 522.958 kb on + strand at 522.970 kb on - strand at 523.013 kb on + strand at 523.017 kb on + strand at 523.017 kb on + strand at 523.100 kb on - strand at 523.533 kb on - strand, within EX28DRAFT_0529 at 523.560 kb on - strand, within EX28DRAFT_0529 at 523.880 kb on + strand, within EX28DRAFT_0529 at 524.192 kb on + strand, within EX28DRAFT_0529 at 524.193 kb on - strand, within EX28DRAFT_0529 at 524.371 kb on + strand at 524.375 kb on + strand at 524.408 kb on - strand at 524.423 kb on + strand at 524.428 kb on + strand at 524.507 kb on - strand at 524.507 kb on - strand at 524.536 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.592 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 522,123 + EX28DRAFT_0528 0.49 +2.6 522,743 + +0.5 522,810 + +0.0 522,958 + -0.3 522,970 - -2.3 523,013 + -1.7 523,017 + -1.6 523,017 + -2.2 523,100 - -1.7 523,533 - EX28DRAFT_0529 0.37 -2.8 523,560 - EX28DRAFT_0529 0.38 -3.1 523,880 + EX28DRAFT_0529 0.61 -2.7 524,192 + EX28DRAFT_0529 0.83 -2.5 524,193 - EX28DRAFT_0529 0.83 -2.1 524,371 + -2.8 524,375 + -4.5 524,408 - -0.7 524,423 + +0.0 524,428 + -1.4 524,507 - -0.9 524,507 - -0.5 524,536 + -0.1 524,591 + -0.2 524,591 + -0.5 524,591 + +0.9 524,591 + -0.4 524,591 + +0.2 524,592 - -1.5
Or see this region's nucleotide sequence