Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2660 and EX28DRAFT_2661 are separated by 6 nucleotides EX28DRAFT_2661 and EX28DRAFT_2662 overlap by 8 nucleotides EX28DRAFT_2662 and EX28DRAFT_2663 overlap by 8 nucleotides
EX28DRAFT_2660: EX28DRAFT_2660 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit, at 2,697,596 to 2,698,192
_2660
EX28DRAFT_2661: EX28DRAFT_2661 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 2,698,199 to 2,698,837
_2661
EX28DRAFT_2662: EX28DRAFT_2662 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 2,698,830 to 2,699,624
_2662
EX28DRAFT_2663: EX28DRAFT_2663 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit, at 2,699,617 to 2,700,852
_2663
Position (kb)
2698
2699
2700 Strain fitness (log2 ratio)
-1
0
1
2 at 2697.891 kb on + strand, within EX28DRAFT_2660 at 2697.891 kb on + strand, within EX28DRAFT_2660 at 2697.891 kb on + strand, within EX28DRAFT_2660 at 2697.892 kb on - strand, within EX28DRAFT_2660 at 2697.896 kb on - strand, within EX28DRAFT_2660 at 2698.114 kb on + strand, within EX28DRAFT_2660 at 2698.114 kb on + strand, within EX28DRAFT_2660 at 2698.115 kb on - strand, within EX28DRAFT_2660 at 2698.115 kb on - strand, within EX28DRAFT_2660 at 2698.232 kb on - strand at 2698.468 kb on - strand, within EX28DRAFT_2661 at 2698.468 kb on - strand, within EX28DRAFT_2661 at 2698.546 kb on - strand, within EX28DRAFT_2661 at 2698.654 kb on + strand, within EX28DRAFT_2661 at 2698.807 kb on + strand at 2698.857 kb on + strand at 2698.858 kb on - strand at 2699.107 kb on + strand, within EX28DRAFT_2662 at 2699.108 kb on - strand, within EX28DRAFT_2662 at 2699.110 kb on + strand, within EX28DRAFT_2662 at 2699.111 kb on - strand, within EX28DRAFT_2662 at 2699.161 kb on + strand, within EX28DRAFT_2662 at 2699.161 kb on + strand, within EX28DRAFT_2662 at 2699.161 kb on + strand, within EX28DRAFT_2662 at 2699.188 kb on + strand, within EX28DRAFT_2662 at 2699.188 kb on + strand, within EX28DRAFT_2662 at 2699.189 kb on - strand, within EX28DRAFT_2662 at 2699.193 kb on - strand, within EX28DRAFT_2662 at 2699.214 kb on - strand, within EX28DRAFT_2662 at 2699.240 kb on - strand, within EX28DRAFT_2662 at 2699.402 kb on + strand, within EX28DRAFT_2662 at 2699.549 kb on + strand at 2699.549 kb on + strand at 2699.549 kb on + strand at 2699.550 kb on - strand at 2699.778 kb on - strand, within EX28DRAFT_2663 at 2699.787 kb on + strand, within EX28DRAFT_2663 at 2699.788 kb on - strand, within EX28DRAFT_2663 at 2699.799 kb on + strand, within EX28DRAFT_2663 at 2700.028 kb on - strand, within EX28DRAFT_2663 at 2700.366 kb on + strand, within EX28DRAFT_2663 at 2700.367 kb on - strand, within EX28DRAFT_2663 at 2700.403 kb on - strand, within EX28DRAFT_2663 at 2700.448 kb on + strand, within EX28DRAFT_2663 at 2700.448 kb on + strand, within EX28DRAFT_2663 at 2700.449 kb on - strand, within EX28DRAFT_2663 at 2700.449 kb on - strand, within EX28DRAFT_2663 at 2700.449 kb on - strand, within EX28DRAFT_2663 at 2700.459 kb on - strand, within EX28DRAFT_2663 at 2700.596 kb on + strand, within EX28DRAFT_2663 at 2700.597 kb on - strand, within EX28DRAFT_2663 at 2700.597 kb on - strand, within EX28DRAFT_2663 at 2700.597 kb on - strand, within EX28DRAFT_2663 at 2700.597 kb on - strand, within EX28DRAFT_2663 at 2700.597 kb on - strand, within EX28DRAFT_2663
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,697,891 + EX28DRAFT_2660 0.49 +0.2 2,697,891 + EX28DRAFT_2660 0.49 +1.2 2,697,891 + EX28DRAFT_2660 0.49 +0.7 2,697,892 - EX28DRAFT_2660 0.50 -0.2 2,697,896 - EX28DRAFT_2660 0.50 -0.3 2,698,114 + EX28DRAFT_2660 0.87 -0.9 2,698,114 + EX28DRAFT_2660 0.87 +0.3 2,698,115 - EX28DRAFT_2660 0.87 -0.3 2,698,115 - EX28DRAFT_2660 0.87 -0.2 2,698,232 - +0.6 2,698,468 - EX28DRAFT_2661 0.42 +0.3 2,698,468 - EX28DRAFT_2661 0.42 +0.0 2,698,546 - EX28DRAFT_2661 0.54 +0.4 2,698,654 + EX28DRAFT_2661 0.71 -1.7 2,698,807 + -0.1 2,698,857 + -0.2 2,698,858 - -0.1 2,699,107 + EX28DRAFT_2662 0.35 +0.1 2,699,108 - EX28DRAFT_2662 0.35 -0.3 2,699,110 + EX28DRAFT_2662 0.35 -1.1 2,699,111 - EX28DRAFT_2662 0.35 -0.2 2,699,161 + EX28DRAFT_2662 0.42 +0.0 2,699,161 + EX28DRAFT_2662 0.42 -0.2 2,699,161 + EX28DRAFT_2662 0.42 +0.5 2,699,188 + EX28DRAFT_2662 0.45 -0.0 2,699,188 + EX28DRAFT_2662 0.45 -0.2 2,699,189 - EX28DRAFT_2662 0.45 -0.8 2,699,193 - EX28DRAFT_2662 0.46 +0.3 2,699,214 - EX28DRAFT_2662 0.48 +0.4 2,699,240 - EX28DRAFT_2662 0.52 -1.1 2,699,402 + EX28DRAFT_2662 0.72 +0.3 2,699,549 + -0.4 2,699,549 + -0.1 2,699,549 + -0.1 2,699,550 - +0.1 2,699,778 - EX28DRAFT_2663 0.13 -0.7 2,699,787 + EX28DRAFT_2663 0.14 +0.8 2,699,788 - EX28DRAFT_2663 0.14 -0.4 2,699,799 + EX28DRAFT_2663 0.15 -0.2 2,700,028 - EX28DRAFT_2663 0.33 +0.3 2,700,366 + EX28DRAFT_2663 0.61 +0.0 2,700,367 - EX28DRAFT_2663 0.61 +0.0 2,700,403 - EX28DRAFT_2663 0.64 +0.6 2,700,448 + EX28DRAFT_2663 0.67 +0.1 2,700,448 + EX28DRAFT_2663 0.67 +2.5 2,700,449 - EX28DRAFT_2663 0.67 -0.6 2,700,449 - EX28DRAFT_2663 0.67 -0.3 2,700,449 - EX28DRAFT_2663 0.67 -0.4 2,700,459 - EX28DRAFT_2663 0.68 -0.3 2,700,596 + EX28DRAFT_2663 0.79 -0.2 2,700,597 - EX28DRAFT_2663 0.79 -0.4 2,700,597 - EX28DRAFT_2663 0.79 -0.2 2,700,597 - EX28DRAFT_2663 0.79 -0.1 2,700,597 - EX28DRAFT_2663 0.79 -0.8 2,700,597 - EX28DRAFT_2663 0.79 +0.3
Or see this region's nucleotide sequence