Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2066 and EX28DRAFT_2067 are separated by 141 nucleotides EX28DRAFT_2067 and EX28DRAFT_2068 are separated by 133 nucleotides
EX28DRAFT_2066: EX28DRAFT_2066 - Uncharacterized protein contain chitin-binding domain type 3, at 2,090,295 to 2,092,124
_2066
EX28DRAFT_2067: EX28DRAFT_2067 - Transglycosylase SLT domain, at 2,092,266 to 2,092,718
_2067
EX28DRAFT_2068: EX28DRAFT_2068 - Chitinase, at 2,092,852 to 2,095,578
_2068
Position (kb)
2092
2093 Strain fitness (log2 ratio)
-2
-1
0
1 at 2091.466 kb on + strand, within EX28DRAFT_2066 at 2091.466 kb on + strand, within EX28DRAFT_2066 at 2091.466 kb on + strand, within EX28DRAFT_2066 at 2091.467 kb on - strand, within EX28DRAFT_2066 at 2091.471 kb on - strand, within EX28DRAFT_2066 at 2091.471 kb on - strand, within EX28DRAFT_2066 at 2091.471 kb on - strand, within EX28DRAFT_2066 at 2091.473 kb on - strand, within EX28DRAFT_2066 at 2091.473 kb on - strand, within EX28DRAFT_2066 at 2091.503 kb on - strand, within EX28DRAFT_2066 at 2091.584 kb on - strand, within EX28DRAFT_2066 at 2091.584 kb on - strand, within EX28DRAFT_2066 at 2091.740 kb on + strand, within EX28DRAFT_2066 at 2091.741 kb on - strand, within EX28DRAFT_2066 at 2091.755 kb on - strand, within EX28DRAFT_2066 at 2091.806 kb on - strand, within EX28DRAFT_2066 at 2091.809 kb on + strand, within EX28DRAFT_2066 at 2091.809 kb on + strand, within EX28DRAFT_2066 at 2091.810 kb on - strand, within EX28DRAFT_2066 at 2091.810 kb on - strand, within EX28DRAFT_2066 at 2091.810 kb on - strand, within EX28DRAFT_2066 at 2091.948 kb on - strand at 2092.028 kb on - strand at 2092.067 kb on + strand at 2092.299 kb on + strand at 2092.351 kb on + strand, within EX28DRAFT_2067 at 2092.757 kb on + strand at 2092.757 kb on + strand at 2092.760 kb on + strand at 2092.778 kb on - strand at 2092.853 kb on + strand at 2092.943 kb on + strand at 2092.952 kb on + strand at 2092.952 kb on + strand at 2092.976 kb on + strand at 2092.977 kb on - strand at 2093.014 kb on + strand at 2093.066 kb on + strand at 2093.117 kb on + strand at 2093.118 kb on - strand at 2093.125 kb on - strand, within EX28DRAFT_2068 at 2093.144 kb on + strand, within EX28DRAFT_2068 at 2093.145 kb on - strand, within EX28DRAFT_2068 at 2093.148 kb on + strand, within EX28DRAFT_2068 at 2093.181 kb on + strand, within EX28DRAFT_2068 at 2093.181 kb on + strand, within EX28DRAFT_2068 at 2093.211 kb on + strand, within EX28DRAFT_2068 at 2093.211 kb on + strand, within EX28DRAFT_2068 at 2093.235 kb on + strand, within EX28DRAFT_2068 at 2093.235 kb on + strand, within EX28DRAFT_2068 at 2093.235 kb on + strand, within EX28DRAFT_2068 at 2093.326 kb on + strand, within EX28DRAFT_2068 at 2093.332 kb on - strand, within EX28DRAFT_2068 at 2093.378 kb on + strand, within EX28DRAFT_2068 at 2093.378 kb on + strand, within EX28DRAFT_2068 at 2093.379 kb on - strand, within EX28DRAFT_2068 at 2093.472 kb on - strand, within EX28DRAFT_2068 at 2093.519 kb on + strand, within EX28DRAFT_2068 at 2093.520 kb on - strand, within EX28DRAFT_2068
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,091,466 + EX28DRAFT_2066 0.64 -0.4 2,091,466 + EX28DRAFT_2066 0.64 -0.6 2,091,466 + EX28DRAFT_2066 0.64 -0.1 2,091,467 - EX28DRAFT_2066 0.64 +1.5 2,091,471 - EX28DRAFT_2066 0.64 -0.4 2,091,471 - EX28DRAFT_2066 0.64 +0.1 2,091,471 - EX28DRAFT_2066 0.64 +1.4 2,091,473 - EX28DRAFT_2066 0.64 +0.4 2,091,473 - EX28DRAFT_2066 0.64 -1.5 2,091,503 - EX28DRAFT_2066 0.66 -0.1 2,091,584 - EX28DRAFT_2066 0.70 +0.9 2,091,584 - EX28DRAFT_2066 0.70 -0.7 2,091,740 + EX28DRAFT_2066 0.79 +0.1 2,091,741 - EX28DRAFT_2066 0.79 -0.8 2,091,755 - EX28DRAFT_2066 0.80 -0.1 2,091,806 - EX28DRAFT_2066 0.83 -0.0 2,091,809 + EX28DRAFT_2066 0.83 -0.0 2,091,809 + EX28DRAFT_2066 0.83 -0.6 2,091,810 - EX28DRAFT_2066 0.83 +0.4 2,091,810 - EX28DRAFT_2066 0.83 -0.3 2,091,810 - EX28DRAFT_2066 0.83 +0.5 2,091,948 - -1.9 2,092,028 - -0.5 2,092,067 + -1.9 2,092,299 + -1.3 2,092,351 + EX28DRAFT_2067 0.19 +0.6 2,092,757 + -0.7 2,092,757 + -0.9 2,092,760 + +1.2 2,092,778 - -0.4 2,092,853 + -0.1 2,092,943 + +0.1 2,092,952 + +0.5 2,092,952 + -0.4 2,092,976 + -0.3 2,092,977 - +0.2 2,093,014 + +0.2 2,093,066 + +1.1 2,093,117 + -1.4 2,093,118 - -0.0 2,093,125 - EX28DRAFT_2068 0.10 +0.4 2,093,144 + EX28DRAFT_2068 0.11 -0.0 2,093,145 - EX28DRAFT_2068 0.11 -0.3 2,093,148 + EX28DRAFT_2068 0.11 +0.2 2,093,181 + EX28DRAFT_2068 0.12 -0.6 2,093,181 + EX28DRAFT_2068 0.12 -0.1 2,093,211 + EX28DRAFT_2068 0.13 +0.5 2,093,211 + EX28DRAFT_2068 0.13 +0.0 2,093,235 + EX28DRAFT_2068 0.14 -1.7 2,093,235 + EX28DRAFT_2068 0.14 -0.4 2,093,235 + EX28DRAFT_2068 0.14 -0.1 2,093,326 + EX28DRAFT_2068 0.17 +0.6 2,093,332 - EX28DRAFT_2068 0.18 +0.2 2,093,378 + EX28DRAFT_2068 0.19 +0.1 2,093,378 + EX28DRAFT_2068 0.19 +0.8 2,093,379 - EX28DRAFT_2068 0.19 -0.6 2,093,472 - EX28DRAFT_2068 0.23 -0.1 2,093,519 + EX28DRAFT_2068 0.24 +0.2 2,093,520 - EX28DRAFT_2068 0.24 +0.2
Or see this region's nucleotide sequence