Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1023 and EX28DRAFT_1024 are separated by 389 nucleotides EX28DRAFT_1024 and EX28DRAFT_1025 are separated by 82 nucleotides
EX28DRAFT_1023: EX28DRAFT_1023 - Cytochrome bd-type quinol oxidase, subunit 1, at 1,029,459 to 1,030,859
_1023
EX28DRAFT_1024: EX28DRAFT_1024 - hypothetical protein, at 1,031,249 to 1,031,437
_1024
EX28DRAFT_1025: EX28DRAFT_1025 - Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs, at 1,031,520 to 1,032,929
_1025
Position (kb)
1031
1032 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1030.301 kb on + strand, within EX28DRAFT_1023 at 1030.301 kb on + strand, within EX28DRAFT_1023 at 1030.301 kb on + strand, within EX28DRAFT_1023 at 1030.301 kb on + strand, within EX28DRAFT_1023 at 1030.301 kb on + strand, within EX28DRAFT_1023 at 1030.302 kb on - strand, within EX28DRAFT_1023 at 1030.302 kb on - strand, within EX28DRAFT_1023 at 1030.302 kb on - strand, within EX28DRAFT_1023 at 1030.385 kb on - strand, within EX28DRAFT_1023 at 1030.440 kb on - strand, within EX28DRAFT_1023 at 1030.460 kb on + strand, within EX28DRAFT_1023 at 1030.460 kb on + strand, within EX28DRAFT_1023 at 1030.460 kb on + strand, within EX28DRAFT_1023 at 1030.561 kb on + strand, within EX28DRAFT_1023 at 1030.561 kb on + strand, within EX28DRAFT_1023 at 1030.562 kb on - strand, within EX28DRAFT_1023 at 1030.562 kb on - strand, within EX28DRAFT_1023 at 1030.730 kb on + strand at 1030.731 kb on - strand at 1030.759 kb on + strand at 1030.760 kb on - strand at 1030.760 kb on - strand at 1030.793 kb on + strand at 1030.794 kb on - strand at 1030.895 kb on + strand at 1031.096 kb on - strand at 1031.096 kb on - strand at 1031.104 kb on + strand at 1031.110 kb on + strand at 1031.163 kb on - strand at 1031.167 kb on - strand at 1031.218 kb on + strand at 1031.218 kb on + strand at 1031.219 kb on - strand at 1031.231 kb on - strand at 1031.249 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.259 kb on - strand at 1031.260 kb on + strand at 1031.260 kb on + strand at 1031.261 kb on - strand at 1031.261 kb on - strand at 1031.317 kb on + strand, within EX28DRAFT_1024 at 1031.431 kb on + strand at 1031.431 kb on + strand at 1031.432 kb on - strand at 1031.432 kb on - strand at 1031.435 kb on + strand at 1031.452 kb on + strand at 1031.494 kb on - strand at 1031.639 kb on + strand at 1031.712 kb on + strand, within EX28DRAFT_1025 at 1031.784 kb on - strand, within EX28DRAFT_1025 at 1031.787 kb on - strand, within EX28DRAFT_1025 at 1031.793 kb on + strand, within EX28DRAFT_1025 at 1031.794 kb on - strand, within EX28DRAFT_1025 at 1031.794 kb on - strand, within EX28DRAFT_1025 at 1031.794 kb on - strand, within EX28DRAFT_1025 at 1031.794 kb on - strand, within EX28DRAFT_1025 at 1031.810 kb on - strand, within EX28DRAFT_1025 at 1032.376 kb on - strand, within EX28DRAFT_1025
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,030,301 + EX28DRAFT_1023 0.60 -0.5 1,030,301 + EX28DRAFT_1023 0.60 +0.1 1,030,301 + EX28DRAFT_1023 0.60 +0.5 1,030,301 + EX28DRAFT_1023 0.60 +0.5 1,030,301 + EX28DRAFT_1023 0.60 +0.1 1,030,302 - EX28DRAFT_1023 0.60 +0.4 1,030,302 - EX28DRAFT_1023 0.60 +0.1 1,030,302 - EX28DRAFT_1023 0.60 +0.1 1,030,385 - EX28DRAFT_1023 0.66 -0.9 1,030,440 - EX28DRAFT_1023 0.70 +0.3 1,030,460 + EX28DRAFT_1023 0.71 +0.5 1,030,460 + EX28DRAFT_1023 0.71 +0.1 1,030,460 + EX28DRAFT_1023 0.71 -0.5 1,030,561 + EX28DRAFT_1023 0.79 +0.2 1,030,561 + EX28DRAFT_1023 0.79 -0.2 1,030,562 - EX28DRAFT_1023 0.79 +0.1 1,030,562 - EX28DRAFT_1023 0.79 -0.4 1,030,730 + +0.1 1,030,731 - -0.2 1,030,759 + -0.1 1,030,760 - +0.1 1,030,760 - +1.2 1,030,793 + -0.7 1,030,794 - +0.1 1,030,895 + +0.1 1,031,096 - +1.1 1,031,096 - +0.4 1,031,104 + +0.9 1,031,110 + +0.1 1,031,163 - +0.9 1,031,167 - -0.1 1,031,218 + +1.0 1,031,218 + +0.2 1,031,219 - -2.4 1,031,231 - +0.7 1,031,249 - -0.1 1,031,259 - +0.7 1,031,259 - +0.1 1,031,259 - +0.5 1,031,259 - -0.6 1,031,259 - +0.8 1,031,259 - -0.1 1,031,259 - +0.5 1,031,260 + -0.5 1,031,260 + -0.2 1,031,261 - +0.1 1,031,261 - +0.0 1,031,317 + EX28DRAFT_1024 0.36 -0.7 1,031,431 + +1.5 1,031,431 + +0.4 1,031,432 - +1.8 1,031,432 - -0.3 1,031,435 + +1.5 1,031,452 + -1.0 1,031,494 - +1.4 1,031,639 + +1.3 1,031,712 + EX28DRAFT_1025 0.14 -0.0 1,031,784 - EX28DRAFT_1025 0.19 -2.4 1,031,787 - EX28DRAFT_1025 0.19 -0.7 1,031,793 + EX28DRAFT_1025 0.19 -0.4 1,031,794 - EX28DRAFT_1025 0.19 +0.1 1,031,794 - EX28DRAFT_1025 0.19 -0.2 1,031,794 - EX28DRAFT_1025 0.19 +0.7 1,031,794 - EX28DRAFT_1025 0.19 -0.5 1,031,810 - EX28DRAFT_1025 0.21 +0.0 1,032,376 - EX28DRAFT_1025 0.61 +0.3
Or see this region's nucleotide sequence