Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0614 and EX28DRAFT_0615 overlap by 8 nucleotides EX28DRAFT_0615 and EX28DRAFT_0616 overlap by 8 nucleotides EX28DRAFT_0616 and EX28DRAFT_0617 are separated by 228 nucleotides EX28DRAFT_0617 and EX28DRAFT_0618 are separated by 74 nucleotides
EX28DRAFT_0614: EX28DRAFT_0614 - Flagellar biosynthesis/type III secretory pathway protein, at 612,065 to 612,772
_0614
EX28DRAFT_0615: EX28DRAFT_0615 - flagellar motor switch protein FliG, at 612,765 to 613,763
_0615
EX28DRAFT_0616: EX28DRAFT_0616 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 613,756 to 615,432
_0616
EX28DRAFT_0617: EX28DRAFT_0617 - flagellar hook-basal body complex protein FliE, at 615,661 to 615,975
_0617
EX28DRAFT_0618: EX28DRAFT_0618 - YedD-like protein, at 616,050 to 616,463
_0618
Position (kb) 613
614
615
616 Strain fitness (log2 ratio) -2
-1
0
1
2 at 612.766 kb on + strand at 612.767 kb on - strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 613.424 kb on + strand, within EX28DRAFT_0615 at 613.534 kb on + strand, within EX28DRAFT_0615 at 613.754 kb on + strand at 613.754 kb on + strand at 613.755 kb on - strand at 613.755 kb on - strand at 613.755 kb on - strand at 613.757 kb on + strand at 613.757 kb on + strand at 613.757 kb on + strand at 613.758 kb on - strand at 613.758 kb on - strand at 613.815 kb on + strand at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.262 kb on - strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.314 kb on - strand, within EX28DRAFT_0616 at 614.342 kb on + strand, within EX28DRAFT_0616 at 614.342 kb on + strand, within EX28DRAFT_0616 at 614.343 kb on - strand, within EX28DRAFT_0616 at 614.343 kb on - strand, within EX28DRAFT_0616 at 614.358 kb on + strand, within EX28DRAFT_0616 at 614.481 kb on + strand, within EX28DRAFT_0616 at 614.589 kb on - strand, within EX28DRAFT_0616 at 614.610 kb on + strand, within EX28DRAFT_0616 at 614.723 kb on + strand, within EX28DRAFT_0616 at 614.724 kb on - strand, within EX28DRAFT_0616 at 614.724 kb on - strand, within EX28DRAFT_0616 at 614.941 kb on + strand, within EX28DRAFT_0616 at 614.993 kb on - strand, within EX28DRAFT_0616 at 615.039 kb on - strand, within EX28DRAFT_0616 at 615.039 kb on - strand, within EX28DRAFT_0616 at 615.159 kb on + strand, within EX28DRAFT_0616 at 615.159 kb on + strand, within EX28DRAFT_0616 at 615.159 kb on + strand, within EX28DRAFT_0616 at 615.160 kb on - strand, within EX28DRAFT_0616 at 615.160 kb on - strand, within EX28DRAFT_0616 at 615.160 kb on - strand, within EX28DRAFT_0616 at 615.160 kb on - strand, within EX28DRAFT_0616 at 615.313 kb on + strand at 615.313 kb on + strand at 615.399 kb on + strand at 615.445 kb on - strand at 615.445 kb on - strand at 615.459 kb on + strand at 615.459 kb on + strand at 615.459 kb on + strand at 615.460 kb on - strand at 615.460 kb on - strand at 615.460 kb on - strand at 615.561 kb on + strand at 615.572 kb on + strand at 615.591 kb on + strand at 615.592 kb on - strand at 615.592 kb on - strand at 615.595 kb on + strand at 615.604 kb on + strand at 615.610 kb on - strand at 615.623 kb on + strand at 615.624 kb on - strand at 615.638 kb on - strand at 615.666 kb on + strand at 615.667 kb on - strand at 615.669 kb on - strand at 615.946 kb on + strand at 616.113 kb on + strand, within EX28DRAFT_0618 at 616.113 kb on + strand, within EX28DRAFT_0618 at 616.113 kb on + strand, within EX28DRAFT_0618 at 616.113 kb on + strand, within EX28DRAFT_0618 at 616.114 kb on - strand, within EX28DRAFT_0618 at 616.309 kb on - strand, within EX28DRAFT_0618 at 616.309 kb on - strand, within EX28DRAFT_0618 at 616.338 kb on + strand, within EX28DRAFT_0618
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 612,766 + -0.2 612,767 - +0.3 612,772 + -0.5 612,772 + +0.1 612,772 + +1.3 612,772 + +0.4 612,772 + -1.2 612,772 + +0.4 612,772 + +0.3 612,772 + -0.1 612,772 + -0.3 612,772 + +0.1 612,772 + -0.2 612,772 + -0.3 612,772 + -1.0 612,772 + +0.9 612,772 + +0.8 612,772 + -0.3 612,772 + +0.5 612,772 + +0.4 612,772 + -0.1 612,773 - -1.0 612,773 - -0.6 612,773 - +0.2 612,773 - +0.1 612,773 - -0.1 612,773 - -1.4 612,773 - -1.1 612,773 - +0.5 612,773 - -0.6 612,773 - +0.3 612,773 - -0.2 612,773 - +0.3 612,773 - -0.0 612,773 - -0.8 612,773 - +0.2 612,773 - +0.6 612,773 - -1.3 612,773 - -0.9 613,424 + EX28DRAFT_0615 0.66 -0.4 613,534 + EX28DRAFT_0615 0.77 +1.9 613,754 + +2.2 613,754 + -0.7 613,755 - +0.9 613,755 - -0.1 613,755 - +0.1 613,757 + -0.5 613,757 + +0.3 613,757 + +0.0 613,758 - -0.2 613,758 - +0.9 613,815 + +0.6 614,261 + EX28DRAFT_0616 0.30 +0.7 614,261 + EX28DRAFT_0616 0.30 -0.1 614,261 + EX28DRAFT_0616 0.30 +0.7 614,261 + EX28DRAFT_0616 0.30 -0.0 614,262 - EX28DRAFT_0616 0.30 +0.6 614,313 + EX28DRAFT_0616 0.33 -0.7 614,313 + EX28DRAFT_0616 0.33 +0.8 614,313 + EX28DRAFT_0616 0.33 +0.4 614,314 - EX28DRAFT_0616 0.33 +0.6 614,342 + EX28DRAFT_0616 0.35 +0.1 614,342 + EX28DRAFT_0616 0.35 +0.4 614,343 - EX28DRAFT_0616 0.35 +1.4 614,343 - EX28DRAFT_0616 0.35 -0.8 614,358 + EX28DRAFT_0616 0.36 -0.3 614,481 + EX28DRAFT_0616 0.43 +0.2 614,589 - EX28DRAFT_0616 0.50 +0.1 614,610 + EX28DRAFT_0616 0.51 +0.5 614,723 + EX28DRAFT_0616 0.58 +0.1 614,724 - EX28DRAFT_0616 0.58 -0.1 614,724 - EX28DRAFT_0616 0.58 +0.4 614,941 + EX28DRAFT_0616 0.71 -1.8 614,993 - EX28DRAFT_0616 0.74 -0.1 615,039 - EX28DRAFT_0616 0.77 +0.6 615,039 - EX28DRAFT_0616 0.77 +0.2 615,159 + EX28DRAFT_0616 0.84 +0.3 615,159 + EX28DRAFT_0616 0.84 +0.3 615,159 + EX28DRAFT_0616 0.84 +1.3 615,160 - EX28DRAFT_0616 0.84 +0.4 615,160 - EX28DRAFT_0616 0.84 +0.2 615,160 - EX28DRAFT_0616 0.84 +0.1 615,160 - EX28DRAFT_0616 0.84 +0.2 615,313 + +0.3 615,313 + +0.4 615,399 + -0.5 615,445 - +1.0 615,445 - -0.5 615,459 + -0.4 615,459 + -0.2 615,459 + -0.1 615,460 - -0.3 615,460 - +0.4 615,460 - +1.1 615,561 + -0.8 615,572 + +0.0 615,591 + -0.1 615,592 - -0.8 615,592 - +0.1 615,595 + +0.0 615,604 + +0.2 615,610 - +0.4 615,623 + -0.5 615,624 - +0.3 615,638 - +0.9 615,666 + +0.0 615,667 - +0.3 615,669 - -1.3 615,946 + -0.2 616,113 + EX28DRAFT_0618 0.15 +1.1 616,113 + EX28DRAFT_0618 0.15 -0.6 616,113 + EX28DRAFT_0618 0.15 -1.0 616,113 + EX28DRAFT_0618 0.15 +1.4 616,114 - EX28DRAFT_0618 0.15 -0.3 616,309 - EX28DRAFT_0618 0.63 -0.7 616,309 - EX28DRAFT_0618 0.63 -0.5 616,338 + EX28DRAFT_0618 0.70 +1.3
Or see this region's nucleotide sequence