Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24655 and AO356_24660 overlap by 4 nucleotides AO356_24660 and AO356_24665 are separated by 9 nucleotides AO356_24665 and AO356_24670 are separated by 600 nucleotides
AO356_24655: AO356_24655 - hypothetical protein, at 5,576,760 to 5,577,254
_24655
AO356_24660: AO356_24660 - hypothetical protein, at 5,577,251 to 5,578,195
_24660
AO356_24665: AO356_24665 - AAA family ATPase, at 5,578,205 to 5,579,164
_24665
AO356_24670: AO356_24670 - hypothetical protein, at 5,579,765 to 5,580,133
_24670
Position (kb) 5578
5579
5580 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5577.286 kb on - strand at 5577.294 kb on - strand at 5577.320 kb on - strand at 5578.492 kb on - strand, within AO356_24665 at 5578.515 kb on + strand, within AO356_24665 at 5578.516 kb on - strand, within AO356_24665 at 5578.701 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.765 kb on - strand, within AO356_24665 at 5578.765 kb on - strand, within AO356_24665 at 5579.053 kb on + strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.439 kb on + strand at 5579.439 kb on + strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.460 kb on + strand at 5579.483 kb on - strand at 5579.699 kb on + strand at 5579.776 kb on - strand at 5579.870 kb on + strand, within AO356_24670 at 5579.871 kb on - strand, within AO356_24670 at 5580.131 kb on + strand at 5580.131 kb on + strand at 5580.132 kb on - strand at 5580.150 kb on + strand at 5580.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 5,577,286 - +0.2 5,577,294 - -0.4 5,577,320 - -2.6 5,578,492 - AO356_24665 0.30 -2.0 5,578,515 + AO356_24665 0.32 -0.7 5,578,516 - AO356_24665 0.32 -2.1 5,578,701 + AO356_24665 0.52 +0.3 5,578,764 + AO356_24665 0.58 -1.6 5,578,764 + AO356_24665 0.58 -0.9 5,578,764 + AO356_24665 0.58 -1.5 5,578,764 + AO356_24665 0.58 -0.1 5,578,764 + AO356_24665 0.58 -1.8 5,578,765 - AO356_24665 0.58 -1.1 5,578,765 - AO356_24665 0.58 -2.3 5,579,053 + AO356_24665 0.88 -1.5 5,579,054 - AO356_24665 0.88 -1.6 5,579,054 - AO356_24665 0.88 -2.1 5,579,054 - AO356_24665 0.88 -1.1 5,579,054 - AO356_24665 0.88 -0.8 5,579,439 + -0.7 5,579,439 + -0.5 5,579,440 - -0.4 5,579,440 - +0.5 5,579,440 - +0.7 5,579,440 - +2.2 5,579,460 + +0.5 5,579,483 - +0.2 5,579,699 + +1.3 5,579,776 - -0.0 5,579,870 + AO356_24670 0.28 -0.6 5,579,871 - AO356_24670 0.29 -2.5 5,580,131 + +0.7 5,580,131 + +0.0 5,580,132 - -1.1 5,580,150 + -0.5 5,580,151 - -0.1
Or see this region's nucleotide sequence