Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09035 and AO356_09040 are separated by 213 nucleotides AO356_09040 and AO356_09045 are separated by 34 nucleotides
AO356_09035: AO356_09035 - chemotaxis protein, at 2,045,828 to 2,047,453
_09035
AO356_09040: AO356_09040 - potassium:proton antiporter, at 2,047,667 to 2,049,409
_09040
AO356_09045: AO356_09045 - potassium transporter KefA, at 2,049,444 to 2,052,806
_09045
Position (kb)
2047
2048
2049
2050 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2046.667 kb on + strand, within AO356_09035 at 2046.762 kb on + strand, within AO356_09035 at 2046.762 kb on + strand, within AO356_09035 at 2046.763 kb on - strand, within AO356_09035 at 2046.763 kb on - strand, within AO356_09035 at 2046.888 kb on + strand, within AO356_09035 at 2046.888 kb on + strand, within AO356_09035 at 2046.888 kb on + strand, within AO356_09035 at 2046.889 kb on - strand, within AO356_09035 at 2046.889 kb on - strand, within AO356_09035 at 2046.889 kb on - strand, within AO356_09035 at 2047.084 kb on + strand, within AO356_09035 at 2047.451 kb on + strand at 2047.552 kb on - strand at 2047.598 kb on + strand at 2047.598 kb on + strand at 2047.599 kb on - strand at 2047.599 kb on - strand at 2047.599 kb on - strand at 2047.716 kb on + strand at 2047.717 kb on - strand at 2047.717 kb on - strand at 2047.835 kb on + strand at 2047.835 kb on + strand at 2047.835 kb on + strand at 2047.835 kb on + strand at 2047.835 kb on + strand at 2047.836 kb on - strand at 2047.847 kb on + strand, within AO356_09040 at 2047.848 kb on - strand, within AO356_09040 at 2047.848 kb on - strand, within AO356_09040 at 2048.411 kb on + strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.412 kb on - strand, within AO356_09040 at 2048.619 kb on + strand, within AO356_09040 at 2048.619 kb on + strand, within AO356_09040 at 2048.619 kb on + strand, within AO356_09040 at 2048.619 kb on + strand, within AO356_09040 at 2048.620 kb on - strand, within AO356_09040 at 2048.620 kb on - strand, within AO356_09040 at 2048.753 kb on + strand, within AO356_09040 at 2048.773 kb on + strand, within AO356_09040 at 2048.919 kb on - strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.037 kb on + strand, within AO356_09040 at 2049.038 kb on - strand, within AO356_09040 at 2049.038 kb on - strand, within AO356_09040 at 2049.038 kb on - strand, within AO356_09040 at 2049.162 kb on + strand, within AO356_09040 at 2049.163 kb on - strand, within AO356_09040 at 2049.203 kb on + strand, within AO356_09040 at 2049.407 kb on + strand at 2049.443 kb on + strand at 2049.443 kb on + strand at 2049.443 kb on + strand at 2049.444 kb on - strand at 2049.444 kb on - strand at 2049.444 kb on - strand at 2049.444 kb on - strand at 2049.444 kb on - strand at 2049.651 kb on + strand at 2049.651 kb on + strand at 2049.652 kb on - strand at 2049.947 kb on + strand, within AO356_09045 at 2049.947 kb on + strand, within AO356_09045 at 2050.290 kb on + strand, within AO356_09045
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,046,667 + AO356_09035 0.52 +0.3 2,046,762 + AO356_09035 0.57 -0.8 2,046,762 + AO356_09035 0.57 -0.3 2,046,763 - AO356_09035 0.58 +0.9 2,046,763 - AO356_09035 0.58 -0.7 2,046,888 + AO356_09035 0.65 +0.4 2,046,888 + AO356_09035 0.65 -0.3 2,046,888 + AO356_09035 0.65 -1.0 2,046,889 - AO356_09035 0.65 -0.1 2,046,889 - AO356_09035 0.65 -0.1 2,046,889 - AO356_09035 0.65 +0.2 2,047,084 + AO356_09035 0.77 +0.6 2,047,451 + -0.6 2,047,552 - +0.2 2,047,598 + +1.7 2,047,598 + +0.3 2,047,599 - +0.9 2,047,599 - -1.3 2,047,599 - -0.3 2,047,716 + -0.5 2,047,717 - -1.2 2,047,717 - +0.6 2,047,835 + +1.0 2,047,835 + -1.2 2,047,835 + -2.1 2,047,835 + -0.5 2,047,835 + -2.5 2,047,836 - -0.9 2,047,847 + AO356_09040 0.10 -1.2 2,047,848 - AO356_09040 0.10 -1.5 2,047,848 - AO356_09040 0.10 -0.6 2,048,411 + AO356_09040 0.43 -1.7 2,048,412 - AO356_09040 0.43 +0.1 2,048,412 - AO356_09040 0.43 -1.2 2,048,412 - AO356_09040 0.43 -1.4 2,048,412 - AO356_09040 0.43 -2.2 2,048,412 - AO356_09040 0.43 -1.3 2,048,412 - AO356_09040 0.43 -0.9 2,048,412 - AO356_09040 0.43 +1.1 2,048,619 + AO356_09040 0.55 +0.8 2,048,619 + AO356_09040 0.55 -1.2 2,048,619 + AO356_09040 0.55 -0.8 2,048,619 + AO356_09040 0.55 -2.2 2,048,620 - AO356_09040 0.55 -1.1 2,048,620 - AO356_09040 0.55 +0.6 2,048,753 + AO356_09040 0.62 -2.6 2,048,773 + AO356_09040 0.63 -0.7 2,048,919 - AO356_09040 0.72 -1.0 2,049,037 + AO356_09040 0.79 -0.2 2,049,037 + AO356_09040 0.79 -0.6 2,049,037 + AO356_09040 0.79 +0.3 2,049,037 + AO356_09040 0.79 -0.7 2,049,037 + AO356_09040 0.79 -0.1 2,049,037 + AO356_09040 0.79 -3.2 2,049,038 - AO356_09040 0.79 +0.5 2,049,038 - AO356_09040 0.79 -0.3 2,049,038 - AO356_09040 0.79 -0.8 2,049,162 + AO356_09040 0.86 -3.5 2,049,163 - AO356_09040 0.86 -1.1 2,049,203 + AO356_09040 0.88 +0.0 2,049,407 + -0.4 2,049,443 + -0.1 2,049,443 + -1.7 2,049,443 + +0.7 2,049,444 - -0.4 2,049,444 - +0.4 2,049,444 - +3.2 2,049,444 - -0.3 2,049,444 - +1.4 2,049,651 + -0.7 2,049,651 + +1.1 2,049,652 - +0.3 2,049,947 + AO356_09045 0.15 -0.8 2,049,947 + AO356_09045 0.15 -0.7 2,050,290 + AO356_09045 0.25 +1.7
Or see this region's nucleotide sequence