Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07790 and AO356_07795 are separated by 309 nucleotides AO356_07795 and AO356_07800 are separated by 144 nucleotides
AO356_07790: AO356_07790 - permease DsdX, at 1,740,880 to 1,742,229
_07790
AO356_07795: AO356_07795 - sulfate transporter, at 1,742,539 to 1,743,984
_07795
AO356_07800: AO356_07800 - epimerase, at 1,744,129 to 1,745,022
_07800
Position (kb)
1742
1743
1744 Strain fitness (log2 ratio)
-2
-1
0
1 at 1741.631 kb on + strand, within AO356_07790 at 1741.631 kb on + strand, within AO356_07790 at 1741.632 kb on - strand, within AO356_07790 at 1741.632 kb on - strand, within AO356_07790 at 1741.632 kb on - strand, within AO356_07790 at 1741.679 kb on + strand, within AO356_07790 at 1741.679 kb on + strand, within AO356_07790 at 1741.680 kb on - strand, within AO356_07790 at 1742.061 kb on - strand, within AO356_07790 at 1742.196 kb on - strand at 1742.275 kb on + strand at 1742.368 kb on + strand at 1742.394 kb on + strand at 1742.395 kb on - strand at 1742.395 kb on - strand at 1742.395 kb on - strand at 1742.425 kb on + strand at 1742.426 kb on - strand at 1742.534 kb on - strand at 1742.534 kb on - strand at 1742.656 kb on + strand at 1742.656 kb on + strand at 1742.656 kb on + strand at 1742.656 kb on + strand at 1742.656 kb on + strand at 1742.657 kb on - strand at 1742.657 kb on - strand at 1742.657 kb on - strand at 1742.657 kb on - strand at 1742.657 kb on - strand at 1742.657 kb on - strand at 1742.779 kb on + strand, within AO356_07795 at 1742.779 kb on + strand, within AO356_07795 at 1742.780 kb on - strand, within AO356_07795 at 1742.780 kb on - strand, within AO356_07795 at 1742.780 kb on - strand, within AO356_07795 at 1742.780 kb on - strand, within AO356_07795 at 1742.971 kb on + strand, within AO356_07795 at 1742.972 kb on - strand, within AO356_07795 at 1743.013 kb on + strand, within AO356_07795 at 1743.014 kb on - strand, within AO356_07795 at 1743.014 kb on - strand, within AO356_07795 at 1743.206 kb on - strand, within AO356_07795 at 1743.654 kb on + strand, within AO356_07795 at 1743.654 kb on + strand, within AO356_07795 at 1743.700 kb on + strand, within AO356_07795 at 1743.700 kb on + strand, within AO356_07795 at 1743.739 kb on + strand, within AO356_07795 at 1743.895 kb on + strand at 1744.052 kb on + strand at 1744.103 kb on + strand at 1744.104 kb on - strand at 1744.104 kb on - strand at 1744.104 kb on - strand at 1744.238 kb on + strand, within AO356_07800 at 1744.238 kb on + strand, within AO356_07800 at 1744.238 kb on + strand, within AO356_07800 at 1744.238 kb on + strand, within AO356_07800 at 1744.239 kb on - strand, within AO356_07800 at 1744.239 kb on - strand, within AO356_07800 at 1744.239 kb on - strand, within AO356_07800 at 1744.239 kb on - strand, within AO356_07800 at 1744.370 kb on + strand, within AO356_07800 at 1744.370 kb on + strand, within AO356_07800 at 1744.370 kb on + strand, within AO356_07800 at 1744.384 kb on + strand, within AO356_07800 at 1744.384 kb on + strand, within AO356_07800 at 1744.384 kb on + strand, within AO356_07800 at 1744.677 kb on - strand, within AO356_07800 at 1744.677 kb on - strand, within AO356_07800 at 1744.960 kb on + strand at 1744.961 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 1,741,631 + AO356_07790 0.56 +1.1 1,741,631 + AO356_07790 0.56 -0.8 1,741,632 - AO356_07790 0.56 -0.9 1,741,632 - AO356_07790 0.56 -0.2 1,741,632 - AO356_07790 0.56 +0.2 1,741,679 + AO356_07790 0.59 +0.8 1,741,679 + AO356_07790 0.59 -1.5 1,741,680 - AO356_07790 0.59 -0.8 1,742,061 - AO356_07790 0.87 -0.2 1,742,196 - -0.5 1,742,275 + +0.8 1,742,368 + +0.5 1,742,394 + -0.2 1,742,395 - -0.7 1,742,395 - +1.5 1,742,395 - -1.6 1,742,425 + -0.7 1,742,426 - +1.2 1,742,534 - +1.2 1,742,534 - +0.4 1,742,656 + +0.2 1,742,656 + +1.1 1,742,656 + -1.0 1,742,656 + -0.8 1,742,656 + -0.8 1,742,657 - -0.7 1,742,657 - -0.6 1,742,657 - +0.5 1,742,657 - -0.2 1,742,657 - +1.3 1,742,657 - -0.5 1,742,779 + AO356_07795 0.17 +0.1 1,742,779 + AO356_07795 0.17 -0.9 1,742,780 - AO356_07795 0.17 +0.9 1,742,780 - AO356_07795 0.17 +1.0 1,742,780 - AO356_07795 0.17 +0.7 1,742,780 - AO356_07795 0.17 -1.0 1,742,971 + AO356_07795 0.30 +0.8 1,742,972 - AO356_07795 0.30 -0.3 1,743,013 + AO356_07795 0.33 +0.3 1,743,014 - AO356_07795 0.33 +0.3 1,743,014 - AO356_07795 0.33 +0.1 1,743,206 - AO356_07795 0.46 +0.6 1,743,654 + AO356_07795 0.77 +0.1 1,743,654 + AO356_07795 0.77 +1.1 1,743,700 + AO356_07795 0.80 -0.1 1,743,700 + AO356_07795 0.80 +0.4 1,743,739 + AO356_07795 0.83 +0.2 1,743,895 + +0.6 1,744,052 + -0.7 1,744,103 + +0.5 1,744,104 - -1.5 1,744,104 - -0.1 1,744,104 - -0.0 1,744,238 + AO356_07800 0.12 +0.0 1,744,238 + AO356_07800 0.12 -0.5 1,744,238 + AO356_07800 0.12 +0.4 1,744,238 + AO356_07800 0.12 +0.5 1,744,239 - AO356_07800 0.12 +0.1 1,744,239 - AO356_07800 0.12 +0.6 1,744,239 - AO356_07800 0.12 -1.1 1,744,239 - AO356_07800 0.12 +0.1 1,744,370 + AO356_07800 0.27 +1.3 1,744,370 + AO356_07800 0.27 +0.4 1,744,370 + AO356_07800 0.27 +0.7 1,744,384 + AO356_07800 0.29 -2.2 1,744,384 + AO356_07800 0.29 +0.9 1,744,384 + AO356_07800 0.29 +0.1 1,744,677 - AO356_07800 0.61 -0.2 1,744,677 - AO356_07800 0.61 -0.0 1,744,960 + +0.1 1,744,961 - +0.2
Or see this region's nucleotide sequence