Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02130 and AO356_02135 are separated by 57 nucleotides AO356_02135 and AO356_02140 overlap by 4 nucleotides AO356_02140 and AO356_02145 are separated by 57 nucleotides AO356_02145 and AO356_02150 are separated by 275 nucleotides
AO356_02130: AO356_02130 - toprim domain protein, at 460,793 to 463,591
_02130
AO356_02135: AO356_02135 - hypothetical protein, at 463,649 to 463,987
_02135
AO356_02140: AO356_02140 - hypothetical protein, at 463,984 to 464,190
_02140
AO356_02145: AO356_02145 - hypothetical protein, at 464,248 to 464,511
_02145
AO356_02150: AO356_02150 - hypothetical protein, at 464,787 to 465,332
_02150
Position (kb) 463
464 Strain fitness (log2 ratio) -2
-1
0
1
2 at 462.714 kb on - strand, within AO356_02130 at 462.714 kb on - strand, within AO356_02130 at 462.714 kb on - strand, within AO356_02130 at 462.714 kb on - strand, within AO356_02130 at 462.717 kb on - strand, within AO356_02130 at 462.771 kb on - strand, within AO356_02130 at 462.771 kb on - strand, within AO356_02130 at 462.771 kb on - strand, within AO356_02130 at 462.771 kb on - strand, within AO356_02130 at 462.910 kb on - strand, within AO356_02130 at 462.910 kb on - strand, within AO356_02130 at 462.910 kb on - strand, within AO356_02130 at 463.108 kb on - strand, within AO356_02130 at 463.108 kb on - strand, within AO356_02130 at 463.116 kb on - strand, within AO356_02130 at 463.303 kb on - strand, within AO356_02130 at 463.303 kb on - strand, within AO356_02130 at 463.303 kb on - strand, within AO356_02130 at 463.305 kb on - strand, within AO356_02130 at 463.311 kb on - strand, within AO356_02130 at 463.311 kb on - strand, within AO356_02130 at 463.311 kb on - strand, within AO356_02130 at 463.311 kb on - strand, within AO356_02130 at 463.521 kb on - strand at 463.608 kb on - strand at 463.608 kb on - strand at 463.608 kb on - strand at 463.695 kb on - strand, within AO356_02135 at 463.935 kb on - strand, within AO356_02135 at 464.227 kb on - strand at 464.227 kb on - strand at 464.227 kb on - strand at 464.227 kb on - strand at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.324 kb on - strand, within AO356_02145 at 464.354 kb on - strand, within AO356_02145 at 464.403 kb on - strand, within AO356_02145 at 464.403 kb on - strand, within AO356_02145 at 464.514 kb on - strand at 464.586 kb on - strand at 464.586 kb on - strand at 464.586 kb on - strand at 464.586 kb on - strand at 464.586 kb on - strand at 464.672 kb on + strand at 464.836 kb on + strand at 464.836 kb on + strand at 464.837 kb on - strand at 464.837 kb on - strand at 464.837 kb on - strand at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.911 kb on + strand, within AO356_02150 at 464.912 kb on - strand, within AO356_02150 at 464.912 kb on - strand, within AO356_02150 at 464.912 kb on - strand, within AO356_02150 at 464.912 kb on - strand, within AO356_02150 at 464.912 kb on - strand, within AO356_02150 at 464.929 kb on + strand, within AO356_02150 at 464.945 kb on - strand, within AO356_02150
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 462,714 - AO356_02130 0.69 +0.4 462,714 - AO356_02130 0.69 -0.5 462,714 - AO356_02130 0.69 +0.8 462,714 - AO356_02130 0.69 +0.2 462,717 - AO356_02130 0.69 +0.3 462,771 - AO356_02130 0.71 +0.7 462,771 - AO356_02130 0.71 +1.7 462,771 - AO356_02130 0.71 +0.2 462,771 - AO356_02130 0.71 -0.8 462,910 - AO356_02130 0.76 -1.6 462,910 - AO356_02130 0.76 +1.0 462,910 - AO356_02130 0.76 +0.6 463,108 - AO356_02130 0.83 -0.7 463,108 - AO356_02130 0.83 +0.4 463,116 - AO356_02130 0.83 -0.7 463,303 - AO356_02130 0.90 -0.2 463,303 - AO356_02130 0.90 -0.1 463,303 - AO356_02130 0.90 -0.2 463,305 - AO356_02130 0.90 -0.6 463,311 - AO356_02130 0.90 -0.5 463,311 - AO356_02130 0.90 -0.0 463,311 - AO356_02130 0.90 -0.1 463,311 - AO356_02130 0.90 -0.2 463,521 - +0.7 463,608 - -1.2 463,608 - -1.2 463,608 - -0.3 463,695 - AO356_02135 0.14 -1.1 463,935 - AO356_02135 0.84 -1.1 464,227 - -0.8 464,227 - -0.7 464,227 - +0.1 464,227 - +0.1 464,324 - AO356_02145 0.29 -0.6 464,324 - AO356_02145 0.29 +1.7 464,324 - AO356_02145 0.29 +0.3 464,324 - AO356_02145 0.29 -0.6 464,324 - AO356_02145 0.29 -0.2 464,324 - AO356_02145 0.29 +0.0 464,324 - AO356_02145 0.29 -1.1 464,354 - AO356_02145 0.40 +0.3 464,403 - AO356_02145 0.59 -0.1 464,403 - AO356_02145 0.59 +0.2 464,514 - -0.6 464,586 - -0.9 464,586 - -0.4 464,586 - -0.2 464,586 - -0.8 464,586 - -0.1 464,672 + -1.9 464,836 + -0.8 464,836 + -1.2 464,837 - -1.3 464,837 - +0.7 464,837 - +0.6 464,911 + AO356_02150 0.23 +2.4 464,911 + AO356_02150 0.23 +1.3 464,911 + AO356_02150 0.23 -0.5 464,911 + AO356_02150 0.23 -0.6 464,911 + AO356_02150 0.23 +0.4 464,911 + AO356_02150 0.23 -0.2 464,911 + AO356_02150 0.23 -0.7 464,911 + AO356_02150 0.23 -0.1 464,912 - AO356_02150 0.23 -0.3 464,912 - AO356_02150 0.23 +0.4 464,912 - AO356_02150 0.23 +0.4 464,912 - AO356_02150 0.23 -1.0 464,912 - AO356_02150 0.23 -0.1 464,929 + AO356_02150 0.26 -0.3 464,945 - AO356_02150 0.29 -0.3
Or see this region's nucleotide sequence