Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1655 and EX28DRAFT_1656 are separated by 17 nucleotides EX28DRAFT_1656 and EX28DRAFT_1657 are separated by 114 nucleotides
EX28DRAFT_1655: EX28DRAFT_1655 - Transcriptional regulators, at 1,671,124 to 1,672,149
_1655
EX28DRAFT_1656: EX28DRAFT_1656 - Transcriptional regulator, at 1,672,167 to 1,673,078
_1656
EX28DRAFT_1657: EX28DRAFT_1657 - drug resistance transporter, Bcr/CflA subfamily, at 1,673,193 to 1,674,392
_1657
Position (kb)
1672
1673
1674 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1671.186 kb on - strand at 1671.190 kb on - strand at 1671.391 kb on + strand, within EX28DRAFT_1655 at 1671.420 kb on + strand, within EX28DRAFT_1655 at 1671.420 kb on + strand, within EX28DRAFT_1655 at 1671.421 kb on - strand, within EX28DRAFT_1655 at 1671.442 kb on + strand, within EX28DRAFT_1655 at 1671.624 kb on + strand, within EX28DRAFT_1655 at 1671.625 kb on - strand, within EX28DRAFT_1655 at 1671.625 kb on - strand, within EX28DRAFT_1655 at 1672.168 kb on + strand at 1672.168 kb on + strand at 1672.169 kb on - strand at 1672.169 kb on - strand at 1672.479 kb on - strand, within EX28DRAFT_1656 at 1672.634 kb on + strand, within EX28DRAFT_1656 at 1673.052 kb on + strand at 1673.147 kb on + strand at 1673.148 kb on - strand at 1673.164 kb on + strand at 1673.165 kb on - strand at 1673.166 kb on + strand at 1673.167 kb on - strand at 1673.167 kb on - strand at 1673.167 kb on - strand at 1673.191 kb on + strand at 1673.192 kb on - strand at 1673.215 kb on + strand at 1673.262 kb on - strand at 1673.262 kb on - strand at 1673.265 kb on + strand at 1673.265 kb on + strand at 1673.265 kb on + strand at 1673.266 kb on - strand at 1673.266 kb on - strand at 1673.266 kb on - strand at 1673.300 kb on - strand at 1673.300 kb on - strand at 1673.597 kb on + strand, within EX28DRAFT_1657 at 1673.707 kb on + strand, within EX28DRAFT_1657 at 1673.829 kb on + strand, within EX28DRAFT_1657 at 1673.830 kb on - strand, within EX28DRAFT_1657 at 1673.926 kb on - strand, within EX28DRAFT_1657 at 1674.028 kb on - strand, within EX28DRAFT_1657
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,671,186 - -0.3 1,671,190 - -3.2 1,671,391 + EX28DRAFT_1655 0.26 -1.1 1,671,420 + EX28DRAFT_1655 0.29 +0.8 1,671,420 + EX28DRAFT_1655 0.29 +0.2 1,671,421 - EX28DRAFT_1655 0.29 -2.4 1,671,442 + EX28DRAFT_1655 0.31 -1.0 1,671,624 + EX28DRAFT_1655 0.49 -0.9 1,671,625 - EX28DRAFT_1655 0.49 -0.4 1,671,625 - EX28DRAFT_1655 0.49 -0.9 1,672,168 + +0.0 1,672,168 + +0.4 1,672,169 - -0.4 1,672,169 - -0.0 1,672,479 - EX28DRAFT_1656 0.34 +0.7 1,672,634 + EX28DRAFT_1656 0.51 +0.0 1,673,052 + -0.4 1,673,147 + -0.7 1,673,148 - -0.3 1,673,164 + -0.2 1,673,165 - +0.6 1,673,166 + -3.0 1,673,167 - +0.0 1,673,167 - +0.3 1,673,167 - -0.4 1,673,191 + -0.5 1,673,192 - +0.2 1,673,215 + -0.5 1,673,262 - +0.2 1,673,262 - +0.2 1,673,265 + +1.0 1,673,265 + +0.9 1,673,265 + -1.4 1,673,266 - -0.4 1,673,266 - -0.9 1,673,266 - +0.1 1,673,300 - +0.6 1,673,300 - -1.0 1,673,597 + EX28DRAFT_1657 0.34 +0.2 1,673,707 + EX28DRAFT_1657 0.43 -0.1 1,673,829 + EX28DRAFT_1657 0.53 +0.2 1,673,830 - EX28DRAFT_1657 0.53 -0.0 1,673,926 - EX28DRAFT_1657 0.61 +0.4 1,674,028 - EX28DRAFT_1657 0.70 +0.5
Or see this region's nucleotide sequence