Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3930 and EX28DRAFT_3931 are separated by 148 nucleotides EX28DRAFT_3931 and EX28DRAFT_3932 are separated by 186 nucleotides EX28DRAFT_3932 and EX28DRAFT_3933 are separated by 148 nucleotides
EX28DRAFT_3930: EX28DRAFT_3930 - lipoprotein, YaeC family, at 138,681 to 139,481
_3930
EX28DRAFT_3931: EX28DRAFT_3931 - Predicted acetyltransferase, at 139,630 to 140,049
_3931
EX28DRAFT_3932: EX28DRAFT_3932 - transcriptional regulator, TetR family, at 140,236 to 140,805
_3932
EX28DRAFT_3933: EX28DRAFT_3933 - RND family efflux transporter, MFP subunit, at 140,954 to 142,075
_3933
Position (kb)
140
141 Strain fitness (log2 ratio)
-2
-1
0
1 at 139.328 kb on - strand, within EX28DRAFT_3930 at 139.328 kb on - strand, within EX28DRAFT_3930 at 139.397 kb on + strand, within EX28DRAFT_3930 at 139.455 kb on + strand at 139.508 kb on + strand at 139.516 kb on - strand at 139.516 kb on - strand at 139.518 kb on - strand at 139.570 kb on - strand at 139.574 kb on + strand at 139.577 kb on - strand at 139.632 kb on - strand at 139.647 kb on + strand at 139.648 kb on - strand at 139.649 kb on + strand at 139.649 kb on + strand at 139.649 kb on + strand at 139.650 kb on - strand at 139.650 kb on - strand at 139.650 kb on - strand at 139.670 kb on + strand at 139.671 kb on - strand at 139.977 kb on + strand, within EX28DRAFT_3931 at 139.978 kb on - strand, within EX28DRAFT_3931 at 139.980 kb on - strand, within EX28DRAFT_3931 at 139.980 kb on - strand, within EX28DRAFT_3931 at 139.999 kb on + strand, within EX28DRAFT_3931 at 140.024 kb on - strand at 140.028 kb on + strand at 140.028 kb on + strand at 140.029 kb on - strand at 140.029 kb on - strand at 140.050 kb on - strand at 140.050 kb on - strand at 140.050 kb on - strand at 140.061 kb on + strand at 140.152 kb on + strand at 140.668 kb on - strand, within EX28DRAFT_3932 at 140.735 kb on + strand, within EX28DRAFT_3932 at 140.757 kb on - strand at 140.757 kb on - strand at 140.768 kb on - strand at 140.780 kb on + strand at 140.785 kb on - strand at 140.804 kb on - strand at 140.818 kb on - strand at 140.835 kb on - strand at 140.891 kb on - strand at 140.894 kb on + strand at 140.895 kb on - strand at 140.910 kb on + strand at 141.566 kb on + strand, within EX28DRAFT_3933 at 141.567 kb on - strand, within EX28DRAFT_3933 at 141.678 kb on - strand, within EX28DRAFT_3933 at 141.678 kb on - strand, within EX28DRAFT_3933
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 139,328 - EX28DRAFT_3930 0.81 +1.6 139,328 - EX28DRAFT_3930 0.81 -0.8 139,397 + EX28DRAFT_3930 0.89 -0.6 139,455 + -2.4 139,508 + -1.2 139,516 - +0.2 139,516 - -0.1 139,518 - -0.5 139,570 - +0.3 139,574 + +1.0 139,577 - -0.0 139,632 - +0.8 139,647 + +0.1 139,648 - +1.0 139,649 + +0.2 139,649 + +0.1 139,649 + +0.5 139,650 - +1.0 139,650 - +0.0 139,650 - -0.1 139,670 + +0.5 139,671 - -0.3 139,977 + EX28DRAFT_3931 0.83 -0.8 139,978 - EX28DRAFT_3931 0.83 -1.0 139,980 - EX28DRAFT_3931 0.83 -0.1 139,980 - EX28DRAFT_3931 0.83 +0.1 139,999 + EX28DRAFT_3931 0.88 +0.5 140,024 - +0.4 140,028 + +0.8 140,028 + -0.3 140,029 - +1.0 140,029 - +0.3 140,050 - +0.4 140,050 - +0.5 140,050 - +0.6 140,061 + +0.3 140,152 + -0.5 140,668 - EX28DRAFT_3932 0.76 +0.1 140,735 + EX28DRAFT_3932 0.88 +0.1 140,757 - -0.3 140,757 - +0.4 140,768 - +0.3 140,780 + -1.1 140,785 - +0.1 140,804 - -0.4 140,818 - -0.6 140,835 - +0.7 140,891 - -0.3 140,894 + +0.2 140,895 - +0.5 140,910 + -0.2 141,566 + EX28DRAFT_3933 0.55 +0.2 141,567 - EX28DRAFT_3933 0.55 +0.2 141,678 - EX28DRAFT_3933 0.65 -0.5 141,678 - EX28DRAFT_3933 0.65 -0.3
Or see this region's nucleotide sequence