Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2785 and EX28DRAFT_2786 are separated by 89 nucleotides EX28DRAFT_2786 and EX28DRAFT_2787 are separated by 129 nucleotides EX28DRAFT_2787 and EX28DRAFT_2788 are separated by 35 nucleotides EX28DRAFT_2788 and EX28DRAFT_2789 overlap by 4 nucleotides
EX28DRAFT_2785: EX28DRAFT_2785 - protein RecA, at 89,250 to 90,308
_2785
EX28DRAFT_2786: EX28DRAFT_2786 - amidohydrolase, PncC family, at 90,398 to 90,895
_2786
EX28DRAFT_2787: EX28DRAFT_2787 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 91,025 to 91,882
_2787
EX28DRAFT_2788: EX28DRAFT_2788 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 91,918 to 92,778
_2788
EX28DRAFT_2789: EX28DRAFT_2789 - ABC-type Mn/Zn transport systems, ATPase component, at 92,775 to 93,428
_2789
Position (kb) 91
92 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 90.397 kb on - strand at 90.635 kb on - strand, within EX28DRAFT_2786 at 90.729 kb on + strand, within EX28DRAFT_2786 at 90.730 kb on - strand, within EX28DRAFT_2786 at 91.077 kb on + strand at 91.077 kb on + strand at 91.355 kb on - strand, within EX28DRAFT_2787 at 91.426 kb on - strand, within EX28DRAFT_2787 at 91.426 kb on - strand, within EX28DRAFT_2787 at 91.895 kb on - strand at 91.977 kb on + strand at 91.978 kb on - strand at 91.978 kb on - strand at 92.104 kb on + strand, within EX28DRAFT_2788 at 92.334 kb on + strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.465 kb on + strand, within EX28DRAFT_2788 at 92.539 kb on - strand, within EX28DRAFT_2788 at 92.583 kb on + strand, within EX28DRAFT_2788 at 92.598 kb on - strand, within EX28DRAFT_2788 at 92.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 90,397 - +0.9 90,635 - EX28DRAFT_2786 0.48 -0.4 90,729 + EX28DRAFT_2786 0.66 +0.5 90,730 - EX28DRAFT_2786 0.67 -0.6 91,077 + +0.1 91,077 + +1.9 91,355 - EX28DRAFT_2787 0.38 -3.0 91,426 - EX28DRAFT_2787 0.47 -0.4 91,426 - EX28DRAFT_2787 0.47 -1.6 91,895 - -0.5 91,977 + +0.5 91,978 - +0.3 91,978 - -0.6 92,104 + EX28DRAFT_2788 0.22 +0.0 92,334 + EX28DRAFT_2788 0.48 -0.7 92,335 - EX28DRAFT_2788 0.48 +0.6 92,335 - EX28DRAFT_2788 0.48 -0.6 92,335 - EX28DRAFT_2788 0.48 -0.0 92,335 - EX28DRAFT_2788 0.48 -1.9 92,335 - EX28DRAFT_2788 0.48 -1.0 92,465 + EX28DRAFT_2788 0.64 -0.6 92,539 - EX28DRAFT_2788 0.72 -2.0 92,583 + EX28DRAFT_2788 0.77 -2.4 92,598 - EX28DRAFT_2788 0.79 -0.7 92,734 - -0.1
Or see this region's nucleotide sequence