Strain Fitness in Pseudomonas sp. S08-1 around OH686_09095

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,856,142	-		OH686_09090	0.50	+0.5
1,856,154	-		OH686_09090	0.51	+0.6
1,856,171	+		OH686_09090	0.52	+0.1
1,856,175	+		OH686_09090	0.52	+0.1
1,856,180	+		OH686_09090	0.52	-0.2
1,856,184	+		OH686_09090	0.52	+0.6
1,856,184	+		OH686_09090	0.52	+0.6
1,856,185	-		OH686_09090	0.52	+0.0
1,856,185	-		OH686_09090	0.52	-0.4
1,856,185	-		OH686_09090	0.52	+0.5
1,856,304	-		OH686_09090	0.59	-0.2
1,856,414	-		OH686_09090	0.64	+0.3
1,856,414	-		OH686_09090	0.64	-0.6
1,856,442	+		OH686_09090	0.66	+0.8
1,856,443	-		OH686_09090	0.66	-0.3
1,856,513	-		OH686_09090	0.70	+0.5
1,856,563	-		OH686_09090	0.72	+0.4
1,856,669	-		OH686_09090	0.78	-0.3
1,856,669	-		OH686_09090	0.78	+0.9
1,856,721	+		OH686_09090	0.81	+0.4
1,856,723	+		OH686_09090	0.81	+0.3
1,856,723	+		OH686_09090	0.81	-0.8
1,856,744	-		OH686_09090	0.82	-1.0
1,856,840	+		OH686_09090	0.87	+0.5
1,856,875	+		OH686_09090	0.89	+0.3
1,856,898	+				+0.8
1,856,899	-				+0.3
1,856,981	+				-0.1
1,856,982	-				+0.7
1,857,000	-				-2.0
1,857,024	-				-0.1
1,857,227	+				-0.1
1,857,237	-		OH686_09095	0.11	+0.1
1,857,237	-		OH686_09095	0.11	-0.4
1,857,278	+		OH686_09095	0.14	-1.2
1,857,278	+		OH686_09095	0.14	+1.0
1,857,278	+		OH686_09095	0.14	-0.2
1,857,279	-		OH686_09095	0.14	+0.2
1,857,336	+		OH686_09095	0.18	+1.4
1,857,336	+		OH686_09095	0.18	+0.7
1,857,337	-		OH686_09095	0.18	+0.1
1,857,337	-		OH686_09095	0.18	-2.0
1,857,337	-		OH686_09095	0.18	-1.6
1,857,348	-		OH686_09095	0.19	+0.7
1,857,419	+		OH686_09095	0.24	+0.5
1,857,419	+		OH686_09095	0.24	+0.2
1,857,426	-		OH686_09095	0.24	+0.2
1,857,432	+		OH686_09095	0.25	+0.2
1,857,433	-		OH686_09095	0.25	-1.0
1,857,433	-		OH686_09095	0.25	+0.3
1,857,433	-		OH686_09095	0.25	+0.2
1,857,462	+		OH686_09095	0.27	-0.9
1,857,506	+		OH686_09095	0.30	+0.4
1,857,506	+		OH686_09095	0.30	+0.4
1,857,507	-		OH686_09095	0.30	-0.4
1,857,566	+		OH686_09095	0.35	-0.6
1,857,567	-		OH686_09095	0.35	-0.1
1,857,567	-		OH686_09095	0.35	-1.7
1,857,593	-		OH686_09095	0.37	-0.3
1,857,639	+		OH686_09095	0.40	+0.3
1,857,639	+		OH686_09095	0.40	+0.2
1,857,639	+		OH686_09095	0.40	+1.0
1,857,639	+		OH686_09095	0.40	-0.8
1,857,639	+		OH686_09095	0.40	+0.5
1,857,640	-		OH686_09095	0.40	-0.0
1,857,640	-		OH686_09095	0.40	-0.2
1,857,738	-		OH686_09095	0.47	+0.3
1,857,811	+		OH686_09095	0.53	-0.9
1,857,812	-		OH686_09095	0.53	-0.4
1,857,862	-		OH686_09095	0.56	-0.2
1,857,863	+		OH686_09095	0.57	+0.2
1,857,864	-		OH686_09095	0.57	-0.9
1,857,864	-		OH686_09095	0.57	-0.1
1,857,867	-		OH686_09095	0.57	-0.6
1,857,926	+		OH686_09095	0.61	+0.1
1,857,950	+		OH686_09095	0.63	+0.0
1,857,951	-		OH686_09095	0.63	+0.5
1,857,951	-		OH686_09095	0.63	-0.5
1,858,063	-		OH686_09095	0.71	-0.2
1,858,065	-		OH686_09095	0.71	-0.2
1,858,189	-		OH686_09095	0.80	+0.2
1,858,190	+		OH686_09095	0.81	-1.7
1,858,192	+		OH686_09095	0.81	-0.0
1,858,192	+		OH686_09095	0.81	-0.0
1,858,231	-		OH686_09095	0.84	+0.4
1,858,258	+		OH686_09095	0.86	-0.0
1,858,259	-		OH686_09095	0.86	+0.1
1,858,271	+		OH686_09095	0.86	-0.7
1,858,272	-		OH686_09095	0.87	+0.6
1,858,284	+		OH686_09095	0.87	-0.1
1,858,284	+		OH686_09095	0.87	-0.9
1,858,285	-		OH686_09095	0.88	+1.6
1,858,297	+		OH686_09095	0.88	+0.2
1,858,297	+		OH686_09095	0.88	+0.3
1,858,298	-		OH686_09095	0.88	-0.1
1,858,306	+		OH686_09095	0.89	+0.5
1,858,330	+				+0.0
1,858,330	+				+1.0
1,858,330	+				-2.0
1,858,396	+				-1.0
1,858,459	-				-0.8
1,858,477	+				-0.9
1,858,526	+				+0.7
1,858,638	+				-0.7
1,858,654	-				-1.2
1,858,715	-				-0.6
1,858,751	+				+1.0
1,858,763	+				+0.2
1,858,763	+				-1.0
1,858,764	-				+0.0
1,858,791	-				-0.3
1,858,794	-				-0.1
1,858,800	+				-0.3
1,858,800	+				-0.0
1,858,801	-				-0.1
1,858,821	+				+0.3
1,858,821	+				-0.7
1,858,821	+				+0.5
1,858,857	-				-0.1
1,858,857	-				+0.0
1,858,922	+		OH686_09100	0.15	+0.1
1,858,922	+		OH686_09100	0.15	+1.5
1,858,923	-		OH686_09100	0.15	+1.0
1,858,923	-		OH686_09100	0.15	+0.6
1,858,939	+		OH686_09100	0.18	-0.4
1,858,940	-		OH686_09100	0.18	+1.0
1,858,979	+		OH686_09100	0.25	-0.1
1,858,980	-		OH686_09100	0.25	-1.8
1,858,993	+		OH686_09100	0.28	-1.7
1,858,994	-		OH686_09100	0.28	-0.2
1,859,058	-		OH686_09100	0.39	-0.2
1,859,128	+		OH686_09100	0.52	+0.3
1,859,128	+		OH686_09100	0.52	-0.6
1,859,128	+		OH686_09100	0.52	-0.2
1,859,128	+		OH686_09100	0.52	+0.1
1,859,280	-		OH686_09100	0.79	+0.1
1,859,280	-		OH686_09100	0.79	+0.2
1,859,280	-		OH686_09100	0.79	+0.2
1,859,307	+		OH686_09100	0.84	-1.0
1,859,307	+		OH686_09100	0.84	+0.5
1,859,308	-		OH686_09100	0.84	-0.5
1,859,343	+				-0.4
1,859,344	-				-1.6
1,859,354	+				-0.5
1,859,354	+				+0.0
1,859,354	+				+0.3
1,859,354	+				+1.0
1,859,354	+				-0.6
1,859,354	+				-0.3
1,859,355	-				-1.7
1,859,355	-				-1.3
1,859,357	+				-0.2
1,859,357	+				+0.5
1,859,357	+				+0.0
1,859,358	-				+0.1
1,859,358	-				+0.0
1,859,358	-				-0.0
1,859,361	+				+0.2
1,859,361	+				+0.3
1,859,362	-				+1.5
1,859,362	-				+0.9
1,859,362	-				-0.3
1,859,362	-				-0.5
1,859,422	+				+0.2
1,859,423	-				+0.2
1,859,423	-				+0.5