Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4326 and EX28DRAFT_4327 are separated by 193 nucleotides EX28DRAFT_4327 and EX28DRAFT_4328 are separated by 22 nucleotides
EX28DRAFT_4326: EX28DRAFT_4326 - methionine synthase (B12-dependent) (EC 2.1.1.13), at 130,048 to 133,731
_4326
EX28DRAFT_4327: EX28DRAFT_4327 - transcriptional regulator, IclR family, at 133,925 to 134,755
_4327
EX28DRAFT_4328: EX28DRAFT_4328 - Isocitrate dehydrogenase kinase/phosphatase, at 134,778 to 136,529
_4328
Position (kb) 133
134
135 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 132.930 kb on - strand, within EX28DRAFT_4326 at 132.958 kb on + strand, within EX28DRAFT_4326 at 132.958 kb on + strand, within EX28DRAFT_4326 at 132.959 kb on - strand, within EX28DRAFT_4326 at 132.959 kb on - strand, within EX28DRAFT_4326 at 132.959 kb on - strand, within EX28DRAFT_4326 at 132.963 kb on - strand, within EX28DRAFT_4326 at 133.035 kb on + strand, within EX28DRAFT_4326 at 133.037 kb on + strand, within EX28DRAFT_4326 at 133.037 kb on + strand, within EX28DRAFT_4326 at 133.038 kb on - strand, within EX28DRAFT_4326 at 133.272 kb on + strand, within EX28DRAFT_4326 at 133.273 kb on - strand, within EX28DRAFT_4326 at 133.480 kb on - strand at 133.540 kb on - strand at 133.540 kb on - strand at 133.717 kb on + strand at 133.718 kb on - strand at 133.718 kb on - strand at 134.365 kb on + strand, within EX28DRAFT_4327 at 134.366 kb on - strand, within EX28DRAFT_4327 at 134.486 kb on + strand, within EX28DRAFT_4327 at 134.487 kb on - strand, within EX28DRAFT_4327 at 135.060 kb on + strand, within EX28DRAFT_4328 at 135.060 kb on + strand, within EX28DRAFT_4328 at 135.060 kb on + strand, within EX28DRAFT_4328 at 135.061 kb on - strand, within EX28DRAFT_4328 at 135.061 kb on - strand, within EX28DRAFT_4328 at 135.089 kb on - strand, within EX28DRAFT_4328 at 135.110 kb on - strand, within EX28DRAFT_4328 at 135.174 kb on - strand, within EX28DRAFT_4328 at 135.208 kb on + strand, within EX28DRAFT_4328 at 135.516 kb on - strand, within EX28DRAFT_4328 at 135.524 kb on + strand, within EX28DRAFT_4328 at 135.524 kb on + strand, within EX28DRAFT_4328 at 135.552 kb on - strand, within EX28DRAFT_4328 at 135.570 kb on - strand, within EX28DRAFT_4328 at 135.570 kb on - strand, within EX28DRAFT_4328 at 135.619 kb on + strand, within EX28DRAFT_4328 at 135.619 kb on + strand, within EX28DRAFT_4328 at 135.620 kb on - strand, within EX28DRAFT_4328 at 135.678 kb on - strand, within EX28DRAFT_4328 at 135.678 kb on - strand, within EX28DRAFT_4328 at 135.678 kb on - strand, within EX28DRAFT_4328 at 135.679 kb on + strand, within EX28DRAFT_4328 at 135.679 kb on + strand, within EX28DRAFT_4328 at 135.679 kb on + strand, within EX28DRAFT_4328 at 135.680 kb on - strand, within EX28DRAFT_4328 at 135.680 kb on - strand, within EX28DRAFT_4328 at 135.680 kb on - strand, within EX28DRAFT_4328 at 135.680 kb on - strand, within EX28DRAFT_4328
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 132,930 - EX28DRAFT_4326 0.78 +1.2 132,958 + EX28DRAFT_4326 0.79 +0.3 132,958 + EX28DRAFT_4326 0.79 +0.2 132,959 - EX28DRAFT_4326 0.79 +0.1 132,959 - EX28DRAFT_4326 0.79 +0.0 132,959 - EX28DRAFT_4326 0.79 +0.5 132,963 - EX28DRAFT_4326 0.79 -0.6 133,035 + EX28DRAFT_4326 0.81 +0.1 133,037 + EX28DRAFT_4326 0.81 +0.8 133,037 + EX28DRAFT_4326 0.81 -1.5 133,038 - EX28DRAFT_4326 0.81 +0.1 133,272 + EX28DRAFT_4326 0.88 +0.4 133,273 - EX28DRAFT_4326 0.88 +0.9 133,480 - -1.0 133,540 - +0.1 133,540 - -0.3 133,717 + +0.5 133,718 - -0.2 133,718 - -0.4 134,365 + EX28DRAFT_4327 0.53 -0.3 134,366 - EX28DRAFT_4327 0.53 -2.0 134,486 + EX28DRAFT_4327 0.68 -0.3 134,487 - EX28DRAFT_4327 0.68 -2.6 135,060 + EX28DRAFT_4328 0.16 -0.7 135,060 + EX28DRAFT_4328 0.16 +0.7 135,060 + EX28DRAFT_4328 0.16 +0.2 135,061 - EX28DRAFT_4328 0.16 +0.0 135,061 - EX28DRAFT_4328 0.16 -0.8 135,089 - EX28DRAFT_4328 0.18 -3.3 135,110 - EX28DRAFT_4328 0.19 -0.3 135,174 - EX28DRAFT_4328 0.23 -0.4 135,208 + EX28DRAFT_4328 0.25 -0.3 135,516 - EX28DRAFT_4328 0.42 -0.7 135,524 + EX28DRAFT_4328 0.43 -0.1 135,524 + EX28DRAFT_4328 0.43 +0.4 135,552 - EX28DRAFT_4328 0.44 +1.5 135,570 - EX28DRAFT_4328 0.45 -0.4 135,570 - EX28DRAFT_4328 0.45 -0.4 135,619 + EX28DRAFT_4328 0.48 +0.4 135,619 + EX28DRAFT_4328 0.48 -0.7 135,620 - EX28DRAFT_4328 0.48 -0.2 135,678 - EX28DRAFT_4328 0.51 +0.3 135,678 - EX28DRAFT_4328 0.51 +0.5 135,678 - EX28DRAFT_4328 0.51 -0.1 135,679 + EX28DRAFT_4328 0.51 +0.2 135,679 + EX28DRAFT_4328 0.51 -0.5 135,679 + EX28DRAFT_4328 0.51 +0.3 135,680 - EX28DRAFT_4328 0.51 -0.1 135,680 - EX28DRAFT_4328 0.51 -0.4 135,680 - EX28DRAFT_4328 0.51 +0.2 135,680 - EX28DRAFT_4328 0.51 +0.4
Or see this region's nucleotide sequence