Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS09795

Experiment: (+)-Arabinogalactan 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan 5 mg/ml (C)
793,097	-		HMPREF1058_RS09800	0.83	-1.4
793,348	+		HMPREF1058_RS09800	0.87	-0.2
793,425	+		HMPREF1058_RS09800	0.88	-1.0
793,720	+				+1.3
794,321	-		HMPREF1058_RS09795	0.50	+1.5
794,401	+		HMPREF1058_RS09795	0.68	-0.8
794,402	-		HMPREF1058_RS09795	0.68	-0.2
794,434	-		HMPREF1058_RS09795	0.75	-1.1
794,649	-				-1.4
794,649	-				-1.3
794,772	-				+0.5
794,773	+				-0.8
794,773	+				+0.1
794,774	-				+0.2
794,846	+				-0.8
795,065	-		HMPREF1058_RS09790	0.17	+0.3
795,242	-		HMPREF1058_RS09790	0.26	+0.3
795,471	-		HMPREF1058_RS09790	0.36	-2.0
795,493	+		HMPREF1058_RS09790	0.38	-0.1