Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1750 and EX28DRAFT_1751 overlap by 4 nucleotides EX28DRAFT_1751 and EX28DRAFT_1752 overlap by 4 nucleotides
EX28DRAFT_1750: EX28DRAFT_1750 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 1,764,559 to 1,766,046
_1750
EX28DRAFT_1751: EX28DRAFT_1751 - arginine N-succinyltransferase, at 1,766,043 to 1,767,077
_1751
EX28DRAFT_1752: EX28DRAFT_1752 - transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family, at 1,767,074 to 1,768,294
_1752
Position (kb)
1766
1767
1768 Strain fitness (log2 ratio)
-1
0
1 at 1765.503 kb on + strand, within EX28DRAFT_1750 at 1765.557 kb on + strand, within EX28DRAFT_1750 at 1765.712 kb on + strand, within EX28DRAFT_1750 at 1765.782 kb on + strand, within EX28DRAFT_1750 at 1766.039 kb on - strand at 1766.039 kb on - strand at 1766.100 kb on - strand at 1766.189 kb on - strand, within EX28DRAFT_1751 at 1766.332 kb on + strand, within EX28DRAFT_1751 at 1766.333 kb on - strand, within EX28DRAFT_1751 at 1766.440 kb on + strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.445 kb on - strand, within EX28DRAFT_1751 at 1766.500 kb on + strand, within EX28DRAFT_1751 at 1766.564 kb on - strand, within EX28DRAFT_1751 at 1766.637 kb on - strand, within EX28DRAFT_1751 at 1766.642 kb on + strand, within EX28DRAFT_1751 at 1766.642 kb on + strand, within EX28DRAFT_1751 at 1766.666 kb on - strand, within EX28DRAFT_1751 at 1766.767 kb on + strand, within EX28DRAFT_1751 at 1766.767 kb on + strand, within EX28DRAFT_1751 at 1767.180 kb on - strand at 1767.180 kb on - strand at 1767.235 kb on + strand, within EX28DRAFT_1752 at 1767.242 kb on - strand, within EX28DRAFT_1752 at 1767.580 kb on + strand, within EX28DRAFT_1752 at 1767.580 kb on + strand, within EX28DRAFT_1752 at 1767.582 kb on + strand, within EX28DRAFT_1752 at 1767.582 kb on + strand, within EX28DRAFT_1752 at 1767.582 kb on + strand, within EX28DRAFT_1752 at 1767.583 kb on - strand, within EX28DRAFT_1752 at 1767.583 kb on - strand, within EX28DRAFT_1752 at 1767.583 kb on - strand, within EX28DRAFT_1752 at 1767.588 kb on + strand, within EX28DRAFT_1752 at 1767.589 kb on - strand, within EX28DRAFT_1752 at 1767.786 kb on + strand, within EX28DRAFT_1752 at 1767.835 kb on - strand, within EX28DRAFT_1752 at 1767.989 kb on - strand, within EX28DRAFT_1752
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,765,503 + EX28DRAFT_1750 0.63 -1.7 1,765,557 + EX28DRAFT_1750 0.67 -0.1 1,765,712 + EX28DRAFT_1750 0.77 -1.4 1,765,782 + EX28DRAFT_1750 0.82 -1.1 1,766,039 - +0.8 1,766,039 - -0.9 1,766,100 - -0.5 1,766,189 - EX28DRAFT_1751 0.14 +0.1 1,766,332 + EX28DRAFT_1751 0.28 +0.0 1,766,333 - EX28DRAFT_1751 0.28 +0.3 1,766,440 + EX28DRAFT_1751 0.38 +0.0 1,766,441 - EX28DRAFT_1751 0.38 -0.2 1,766,441 - EX28DRAFT_1751 0.38 +0.4 1,766,441 - EX28DRAFT_1751 0.38 +0.1 1,766,441 - EX28DRAFT_1751 0.38 +0.5 1,766,444 + EX28DRAFT_1751 0.39 +0.2 1,766,444 + EX28DRAFT_1751 0.39 -0.1 1,766,444 + EX28DRAFT_1751 0.39 +0.1 1,766,445 - EX28DRAFT_1751 0.39 +1.3 1,766,500 + EX28DRAFT_1751 0.44 -0.2 1,766,564 - EX28DRAFT_1751 0.50 +0.1 1,766,637 - EX28DRAFT_1751 0.57 +1.2 1,766,642 + EX28DRAFT_1751 0.58 -0.7 1,766,642 + EX28DRAFT_1751 0.58 +0.1 1,766,666 - EX28DRAFT_1751 0.60 +0.3 1,766,767 + EX28DRAFT_1751 0.70 -0.2 1,766,767 + EX28DRAFT_1751 0.70 +0.5 1,767,180 - +0.0 1,767,180 - -0.2 1,767,235 + EX28DRAFT_1752 0.13 +1.4 1,767,242 - EX28DRAFT_1752 0.14 -0.2 1,767,580 + EX28DRAFT_1752 0.41 -0.7 1,767,580 + EX28DRAFT_1752 0.41 -0.1 1,767,582 + EX28DRAFT_1752 0.42 +0.0 1,767,582 + EX28DRAFT_1752 0.42 -0.0 1,767,582 + EX28DRAFT_1752 0.42 +0.2 1,767,583 - EX28DRAFT_1752 0.42 -0.5 1,767,583 - EX28DRAFT_1752 0.42 +0.5 1,767,583 - EX28DRAFT_1752 0.42 -0.0 1,767,588 + EX28DRAFT_1752 0.42 +0.6 1,767,589 - EX28DRAFT_1752 0.42 +0.5 1,767,786 + EX28DRAFT_1752 0.58 +0.4 1,767,835 - EX28DRAFT_1752 0.62 -0.1 1,767,989 - EX28DRAFT_1752 0.75 +0.3
Or see this region's nucleotide sequence