Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2749

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2748 and EX28DRAFT_2749 are separated by 106 nucleotidesEX28DRAFT_2749 and EX28DRAFT_2750 are separated by 320 nucleotides EX28DRAFT_2748: EX28DRAFT_2748 - Succinyl-CoA synthetase, alpha subunit, at 58,741 to 60,282 _2748 EX28DRAFT_2749: EX28DRAFT_2749 - FOG: Ankyrin repeat, at 60,389 to 60,994 _2749 EX28DRAFT_2750: EX28DRAFT_2750 - Transcriptional regulator, at 61,315 to 62,244 _2750 Position (kb) 60 61Strain fitness (log2 ratio) -1 0 1at 60.075 kb on + strand, within EX28DRAFT_2748at 60.079 kb on + strand, within EX28DRAFT_2748at 60.079 kb on + strand, within EX28DRAFT_2748at 60.080 kb on - strand, within EX28DRAFT_2748at 60.080 kb on - strand, within EX28DRAFT_2748at 60.142 kb on + strandat 60.146 kb on - strandat 60.146 kb on - strandat 60.229 kb on + strandat 60.248 kb on + strandat 60.248 kb on + strandat 60.249 kb on - strandat 60.262 kb on + strandat 60.340 kb on - strandat 60.419 kb on + strandat 60.420 kb on - strandat 60.468 kb on + strand, within EX28DRAFT_2749at 60.840 kb on + strand, within EX28DRAFT_2749at 60.841 kb on - strand, within EX28DRAFT_2749at 60.841 kb on - strand, within EX28DRAFT_2749at 60.862 kb on + strand, within EX28DRAFT_2749at 60.862 kb on + strand, within EX28DRAFT_2749at 60.865 kb on + strand, within EX28DRAFT_2749at 60.902 kb on - strand, within EX28DRAFT_2749at 60.995 kb on - strandat 61.047 kb on - strandat 61.053 kb on - strandat 61.191 kb on + strandat 61.192 kb on - strandat 61.281 kb on + strandat 61.282 kb on - strandat 61.314 kb on + strandat 61.520 kb on - strand, within EX28DRAFT_2750at 61.576 kb on - strand, within EX28DRAFT_2750at 61.615 kb on - strand, within EX28DRAFT_2750at 61.631 kb on - strand, within EX28DRAFT_2750at 61.715 kb on - strand, within EX28DRAFT_2750

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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60,075 + EX28DRAFT_2748 0.87 -0.2
60,079 + EX28DRAFT_2748 0.87 -1.2
60,079 + EX28DRAFT_2748 0.87 -0.1
60,080 - EX28DRAFT_2748 0.87 +0.6
60,080 - EX28DRAFT_2748 0.87 -0.2
60,142 + +0.2
60,146 - +0.3
60,146 - +0.2
60,229 + -0.3
60,248 + -0.1
60,248 + +0.3
60,249 - +0.1
60,262 + -0.3
60,340 - -0.1
60,419 + +0.6
60,420 - +0.2
60,468 + EX28DRAFT_2749 0.13 +0.2
60,840 + EX28DRAFT_2749 0.74 -0.4
60,841 - EX28DRAFT_2749 0.75 +0.3
60,841 - EX28DRAFT_2749 0.75 +1.0
60,862 + EX28DRAFT_2749 0.78 +0.8
60,862 + EX28DRAFT_2749 0.78 +0.2
60,865 + EX28DRAFT_2749 0.79 +0.8
60,902 - EX28DRAFT_2749 0.85 +0.7
60,995 - +0.3
61,047 - +0.2
61,053 - +0.1
61,191 + +0.5
61,192 - -0.4
61,281 + +0.0
61,282 - -0.2
61,314 + -0.2
61,520 - EX28DRAFT_2750 0.22 +0.2
61,576 - EX28DRAFT_2750 0.28 +0.1
61,615 - EX28DRAFT_2750 0.32 -0.3
61,631 - EX28DRAFT_2750 0.34 +0.2
61,715 - EX28DRAFT_2750 0.43 +0.1

Or see this region's nucleotide sequence