Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1535 and EX28DRAFT_1536 are separated by 175 nucleotides EX28DRAFT_1536 and EX28DRAFT_1537 overlap by 1 nucleotides
EX28DRAFT_1535: EX28DRAFT_1535 - Transcriptional regulator, at 1,549,251 to 1,550,162
_1535
EX28DRAFT_1536: EX28DRAFT_1536 - amidohydrolase, at 1,550,338 to 1,551,648
_1536
EX28DRAFT_1537: EX28DRAFT_1537 - amidohydrolase, at 1,551,648 to 1,553,093
_1537
Position (kb)
1550
1551
1552 Strain fitness (log2 ratio)
-2
-1
0
1 at 1549.341 kb on + strand at 1549.346 kb on - strand, within EX28DRAFT_1535 at 1549.348 kb on + strand, within EX28DRAFT_1535 at 1549.348 kb on + strand, within EX28DRAFT_1535 at 1549.434 kb on + strand, within EX28DRAFT_1535 at 1549.469 kb on + strand, within EX28DRAFT_1535 at 1549.549 kb on + strand, within EX28DRAFT_1535 at 1549.552 kb on + strand, within EX28DRAFT_1535 at 1549.553 kb on - strand, within EX28DRAFT_1535 at 1549.585 kb on + strand, within EX28DRAFT_1535 at 1549.602 kb on - strand, within EX28DRAFT_1535 at 1549.708 kb on + strand, within EX28DRAFT_1535 at 1549.708 kb on + strand, within EX28DRAFT_1535 at 1549.709 kb on - strand, within EX28DRAFT_1535 at 1549.743 kb on + strand, within EX28DRAFT_1535 at 1549.958 kb on - strand, within EX28DRAFT_1535 at 1550.163 kb on - strand at 1550.209 kb on + strand at 1550.210 kb on - strand at 1550.210 kb on - strand at 1550.215 kb on - strand at 1550.279 kb on - strand at 1550.283 kb on - strand at 1550.313 kb on + strand at 1550.314 kb on - strand at 1550.944 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1551.313 kb on + strand, within EX28DRAFT_1536 at 1551.313 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.515 kb on - strand, within EX28DRAFT_1536 at 1551.515 kb on - strand, within EX28DRAFT_1536 at 1551.516 kb on + strand, within EX28DRAFT_1536 at 1551.647 kb on - strand at 1551.647 kb on - strand at 1551.647 kb on - strand at 1551.669 kb on - strand at 1552.068 kb on + strand, within EX28DRAFT_1537 at 1552.110 kb on - strand, within EX28DRAFT_1537 at 1552.184 kb on + strand, within EX28DRAFT_1537 at 1552.354 kb on - strand, within EX28DRAFT_1537 at 1552.417 kb on - strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.529 kb on + strand, within EX28DRAFT_1537 at 1552.579 kb on - strand, within EX28DRAFT_1537
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,549,341 + +0.4 1,549,346 - EX28DRAFT_1535 0.10 +0.1 1,549,348 + EX28DRAFT_1535 0.11 -0.1 1,549,348 + EX28DRAFT_1535 0.11 -0.1 1,549,434 + EX28DRAFT_1535 0.20 -0.0 1,549,469 + EX28DRAFT_1535 0.24 -0.6 1,549,549 + EX28DRAFT_1535 0.33 -0.2 1,549,552 + EX28DRAFT_1535 0.33 -0.2 1,549,553 - EX28DRAFT_1535 0.33 +0.2 1,549,585 + EX28DRAFT_1535 0.37 +0.6 1,549,602 - EX28DRAFT_1535 0.38 +0.6 1,549,708 + EX28DRAFT_1535 0.50 -0.4 1,549,708 + EX28DRAFT_1535 0.50 +0.5 1,549,709 - EX28DRAFT_1535 0.50 -0.6 1,549,743 + EX28DRAFT_1535 0.54 -0.2 1,549,958 - EX28DRAFT_1535 0.78 +0.2 1,550,163 - +0.7 1,550,209 + +0.2 1,550,210 - -0.1 1,550,210 - -0.3 1,550,215 - +0.3 1,550,279 - +0.4 1,550,283 - +0.1 1,550,313 + -0.1 1,550,314 - +0.3 1,550,944 + EX28DRAFT_1536 0.46 +0.4 1,550,961 + EX28DRAFT_1536 0.48 +0.8 1,550,961 + EX28DRAFT_1536 0.48 +0.7 1,550,961 + EX28DRAFT_1536 0.48 -0.2 1,550,961 + EX28DRAFT_1536 0.48 +0.3 1,551,313 + EX28DRAFT_1536 0.74 +0.3 1,551,313 + EX28DRAFT_1536 0.74 -0.1 1,551,514 + EX28DRAFT_1536 0.90 +0.6 1,551,514 + EX28DRAFT_1536 0.90 +0.9 1,551,514 + EX28DRAFT_1536 0.90 +0.2 1,551,515 - EX28DRAFT_1536 0.90 +0.3 1,551,515 - EX28DRAFT_1536 0.90 +0.0 1,551,516 + EX28DRAFT_1536 0.90 -0.0 1,551,647 - -0.2 1,551,647 - +0.0 1,551,647 - -0.3 1,551,669 - -2.0 1,552,068 + EX28DRAFT_1537 0.29 -0.4 1,552,110 - EX28DRAFT_1537 0.32 +0.4 1,552,184 + EX28DRAFT_1537 0.37 -0.3 1,552,354 - EX28DRAFT_1537 0.49 +0.3 1,552,417 - EX28DRAFT_1537 0.53 -0.4 1,552,458 + EX28DRAFT_1537 0.56 -0.0 1,552,458 + EX28DRAFT_1537 0.56 -1.8 1,552,458 + EX28DRAFT_1537 0.56 +0.6 1,552,529 + EX28DRAFT_1537 0.61 -2.7 1,552,579 - EX28DRAFT_1537 0.64 -0.1
Or see this region's nucleotide sequence