Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0566 and EX28DRAFT_0567 are separated by 43 nucleotides EX28DRAFT_0567 and EX28DRAFT_0568 are separated by 107 nucleotides EX28DRAFT_0568 and EX28DRAFT_0569 are separated by 152 nucleotides
EX28DRAFT_0566: EX28DRAFT_0566 - Transcriptional regulator, at 563,083 to 564,033
_0566
EX28DRAFT_0567: EX28DRAFT_0567 - Glutathione S-transferase, at 564,077 to 564,748
_0567
EX28DRAFT_0568: EX28DRAFT_0568 - Transcriptional regulator, at 564,856 to 565,767
_0568
EX28DRAFT_0569: EX28DRAFT_0569 - Transcriptional regulator, at 565,920 to 566,840
_0569
Position (kb) 564
565
566 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 563.929 kb on + strand, within EX28DRAFT_0566 at 563.929 kb on + strand, within EX28DRAFT_0566 at 563.930 kb on - strand, within EX28DRAFT_0566 at 564.032 kb on - strand at 564.188 kb on - strand, within EX28DRAFT_0567 at 564.299 kb on - strand, within EX28DRAFT_0567 at 564.299 kb on - strand, within EX28DRAFT_0567 at 564.354 kb on + strand, within EX28DRAFT_0567 at 564.355 kb on - strand, within EX28DRAFT_0567 at 564.486 kb on - strand, within EX28DRAFT_0567 at 564.510 kb on - strand, within EX28DRAFT_0567 at 564.580 kb on + strand, within EX28DRAFT_0567 at 564.647 kb on + strand, within EX28DRAFT_0567 at 564.651 kb on + strand, within EX28DRAFT_0567 at 564.651 kb on + strand, within EX28DRAFT_0567 at 564.651 kb on + strand, within EX28DRAFT_0567 at 564.651 kb on + strand, within EX28DRAFT_0567 at 564.652 kb on - strand, within EX28DRAFT_0567 at 564.652 kb on - strand, within EX28DRAFT_0567 at 564.680 kb on - strand, within EX28DRAFT_0567 at 564.680 kb on - strand, within EX28DRAFT_0567 at 564.744 kb on + strand at 564.744 kb on + strand at 564.744 kb on + strand at 564.745 kb on - strand at 564.745 kb on - strand at 564.749 kb on + strand at 564.750 kb on - strand at 564.767 kb on + strand at 564.768 kb on - strand at 564.777 kb on - strand at 564.794 kb on - strand at 564.796 kb on + strand at 564.796 kb on + strand at 564.797 kb on - strand at 564.800 kb on - strand at 565.057 kb on + strand, within EX28DRAFT_0568 at 565.057 kb on + strand, within EX28DRAFT_0568 at 565.058 kb on - strand, within EX28DRAFT_0568 at 565.058 kb on - strand, within EX28DRAFT_0568 at 565.274 kb on + strand, within EX28DRAFT_0568 at 565.826 kb on + strand at 565.893 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.896 kb on - strand at 565.921 kb on + strand at 565.922 kb on - strand at 566.027 kb on - strand, within EX28DRAFT_0569 at 566.062 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.183 kb on - strand, within EX28DRAFT_0569 at 566.202 kb on - strand, within EX28DRAFT_0569 at 566.268 kb on + strand, within EX28DRAFT_0569 at 566.330 kb on - strand, within EX28DRAFT_0569 at 566.553 kb on + strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.644 kb on + strand, within EX28DRAFT_0569 at 566.645 kb on - strand, within EX28DRAFT_0569 at 566.732 kb on + strand, within EX28DRAFT_0569 at 566.759 kb on + strand at 566.759 kb on + strand at 566.759 kb on + strand at 566.760 kb on - strand at 566.760 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 563,929 + EX28DRAFT_0566 0.89 -0.9 563,929 + EX28DRAFT_0566 0.89 -0.7 563,930 - EX28DRAFT_0566 0.89 +0.1 564,032 - -3.4 564,188 - EX28DRAFT_0567 0.17 +0.2 564,299 - EX28DRAFT_0567 0.33 +0.2 564,299 - EX28DRAFT_0567 0.33 +0.1 564,354 + EX28DRAFT_0567 0.41 -0.5 564,355 - EX28DRAFT_0567 0.41 -0.7 564,486 - EX28DRAFT_0567 0.61 +0.3 564,510 - EX28DRAFT_0567 0.64 -0.2 564,580 + EX28DRAFT_0567 0.75 -0.0 564,647 + EX28DRAFT_0567 0.85 +0.2 564,651 + EX28DRAFT_0567 0.85 -0.6 564,651 + EX28DRAFT_0567 0.85 +0.3 564,651 + EX28DRAFT_0567 0.85 +0.2 564,651 + EX28DRAFT_0567 0.85 -0.7 564,652 - EX28DRAFT_0567 0.86 -0.0 564,652 - EX28DRAFT_0567 0.86 -0.3 564,680 - EX28DRAFT_0567 0.90 +0.2 564,680 - EX28DRAFT_0567 0.90 -0.3 564,744 + -1.3 564,744 + +0.7 564,744 + +0.5 564,745 - -0.0 564,745 - +0.3 564,749 + -0.2 564,750 - -0.0 564,767 + +0.6 564,768 - +0.2 564,777 - -0.1 564,794 - +0.3 564,796 + -0.4 564,796 + -1.7 564,797 - -0.1 564,800 - -0.2 565,057 + EX28DRAFT_0568 0.22 -0.4 565,057 + EX28DRAFT_0568 0.22 +1.0 565,058 - EX28DRAFT_0568 0.22 +0.1 565,058 - EX28DRAFT_0568 0.22 +0.1 565,274 + EX28DRAFT_0568 0.46 +0.6 565,826 + -0.3 565,893 + +0.2 565,895 + +0.1 565,895 + -0.1 565,895 + +1.0 565,895 + -0.0 565,896 - -0.4 565,921 + +0.4 565,922 - -0.5 566,027 - EX28DRAFT_0569 0.12 -0.2 566,062 - EX28DRAFT_0569 0.15 -0.0 566,105 - EX28DRAFT_0569 0.20 -0.8 566,105 - EX28DRAFT_0569 0.20 -2.5 566,105 - EX28DRAFT_0569 0.20 +1.8 566,105 - EX28DRAFT_0569 0.20 +0.7 566,182 + EX28DRAFT_0569 0.28 -0.0 566,182 + EX28DRAFT_0569 0.28 -0.1 566,182 + EX28DRAFT_0569 0.28 +0.1 566,183 - EX28DRAFT_0569 0.29 +0.0 566,202 - EX28DRAFT_0569 0.31 +0.8 566,268 + EX28DRAFT_0569 0.38 +0.6 566,330 - EX28DRAFT_0569 0.45 -0.1 566,553 + EX28DRAFT_0569 0.69 +0.8 566,554 - EX28DRAFT_0569 0.69 -0.2 566,554 - EX28DRAFT_0569 0.69 +0.4 566,554 - EX28DRAFT_0569 0.69 +0.1 566,644 + EX28DRAFT_0569 0.79 +0.3 566,645 - EX28DRAFT_0569 0.79 -0.0 566,732 + EX28DRAFT_0569 0.88 +0.4 566,759 + +0.6 566,759 + +0.1 566,759 + -1.3 566,760 - +0.1 566,760 - +0.0
Or see this region's nucleotide sequence