Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2269

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,634,535	-		Psyr_2268	0.58	+0.7
2,634,586	+		Psyr_2268	0.64	-0.8
2,634,586	+		Psyr_2268	0.64	+1.1
2,634,586	+		Psyr_2268	0.64	+0.9
2,634,586	+		Psyr_2268	0.64	-0.8
2,634,587	-		Psyr_2268	0.64	+1.8
2,634,636	+		Psyr_2268	0.69	+1.0
2,634,636	+		Psyr_2268	0.69	+0.8
2,634,689	-		Psyr_2268	0.75	+1.5
2,634,689	-		Psyr_2268	0.75	+0.5
2,634,689	-		Psyr_2268	0.75	+1.5
2,634,811	-		Psyr_2268	0.88	-1.3
2,634,811	-		Psyr_2268	0.88	-0.6
2,634,950	+				-0.0
2,634,950	+				+2.4
2,634,950	+				+0.4
2,634,950	+				-2.0
2,634,951	-				-0.3
2,634,951	-				-1.3
2,634,954	+				-0.0
2,634,955	-				-0.8
2,634,955	-				-0.9
2,635,020	+				-1.9
2,635,020	+				-1.5
2,635,021	-				-1.8
2,635,275	+		Psyr_2269	0.20	-1.8
2,635,275	+		Psyr_2269	0.20	-2.4
2,635,275	+		Psyr_2269	0.20	-0.5
2,635,275	+		Psyr_2269	0.20	+1.5
2,635,276	-		Psyr_2269	0.21	-0.0
2,635,276	-		Psyr_2269	0.21	-2.0
2,635,543	+		Psyr_2269	0.50	-1.1
2,635,773	-		Psyr_2269	0.75	+1.0
2,635,861	+		Psyr_2269	0.85	-2.6
2,635,861	+		Psyr_2269	0.85	-0.9
2,635,861	+		Psyr_2269	0.85	-0.0
2,635,861	+		Psyr_2269	0.85	+0.2
2,635,984	+				-0.0
2,635,984	+				-0.0
2,635,985	-				+0.3
2,635,985	-				+1.5
2,636,059	-				-0.3
2,636,059	-				+0.6
2,636,067	-		Psyr_2270	0.11	-0.5
2,636,418	+		Psyr_2270	0.73	+1.5
2,636,418	+		Psyr_2270	0.73	+0.8
2,636,418	+		Psyr_2270	0.73	-0.5
2,636,418	+		Psyr_2270	0.73	+2.3
2,636,419	-		Psyr_2270	0.73	+0.5
2,636,419	-		Psyr_2270	0.73	+0.5
2,636,419	-		Psyr_2270	0.73	-1.6
2,636,419	-		Psyr_2270	0.73	+0.9
2,636,419	-		Psyr_2270	0.73	-2.2
2,636,419	-		Psyr_2270	0.73	-0.5
2,636,598	+				-0.8
2,636,600	+				-1.9
2,636,600	+				-0.9
2,636,600	+				-0.8
2,636,601	-				+1.2
2,636,601	-				+0.3
2,636,601	-				+2.5
2,636,613	-				+0.5
2,636,668	+				+0.7
2,636,669	-				+2.0
2,636,669	-				-0.8
2,636,782	+				+0.2
2,636,782	+				-0.6
2,636,963	+		Psyr_2271	0.22	-2.8
2,636,964	-		Psyr_2271	0.22	-0.0