Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5193

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
5,987,423	+		Pf6N2E2_5192	0.26	+0.3
5,987,423	+		Pf6N2E2_5192	0.26	-0.1
5,987,423	+		Pf6N2E2_5192	0.26	+0.2
5,987,423	+		Pf6N2E2_5192	0.26	-0.0
5,987,424	-		Pf6N2E2_5192	0.26	-0.2
5,987,424	-		Pf6N2E2_5192	0.26	-0.5
5,987,453	+		Pf6N2E2_5192	0.28	-0.1
5,987,453	+		Pf6N2E2_5192	0.28	+0.2
5,987,453	+		Pf6N2E2_5192	0.28	+0.6
5,987,453	+		Pf6N2E2_5192	0.28	+0.0
5,987,453	+		Pf6N2E2_5192	0.28	-0.2
5,987,454	-		Pf6N2E2_5192	0.28	+0.2
5,987,454	-		Pf6N2E2_5192	0.28	-1.2
5,987,657	+		Pf6N2E2_5192	0.46	+0.0
5,987,657	+		Pf6N2E2_5192	0.46	+0.9
5,987,657	+		Pf6N2E2_5192	0.46	+0.0
5,987,658	-		Pf6N2E2_5192	0.46	+0.3
5,987,658	-		Pf6N2E2_5192	0.46	-0.2
5,987,658	-		Pf6N2E2_5192	0.46	+0.2
5,987,658	-		Pf6N2E2_5192	0.46	-0.7
5,987,661	+		Pf6N2E2_5192	0.46	+0.6
5,987,661	+		Pf6N2E2_5192	0.46	+0.4
5,987,661	+		Pf6N2E2_5192	0.46	-0.2
5,987,661	+		Pf6N2E2_5192	0.46	+0.3
5,987,661	+		Pf6N2E2_5192	0.46	-0.5
5,987,661	+		Pf6N2E2_5192	0.46	+0.0
5,987,661	+		Pf6N2E2_5192	0.46	+0.2
5,987,662	-		Pf6N2E2_5192	0.46	-0.3
5,987,662	-		Pf6N2E2_5192	0.46	-0.6
5,987,662	-		Pf6N2E2_5192	0.46	-1.4
5,987,662	-		Pf6N2E2_5192	0.46	+0.1
5,987,662	-		Pf6N2E2_5192	0.46	+0.3
5,987,662	-		Pf6N2E2_5192	0.46	+1.2
5,987,662	-		Pf6N2E2_5192	0.46	+0.3
5,987,662	-		Pf6N2E2_5192	0.46	+0.7
5,987,663	+		Pf6N2E2_5192	0.46	+0.4
5,987,663	+		Pf6N2E2_5192	0.46	-0.3
5,987,663	+		Pf6N2E2_5192	0.46	+0.1
5,987,663	+		Pf6N2E2_5192	0.46	-0.4
5,987,663	+		Pf6N2E2_5192	0.46	-0.6
5,987,664	-		Pf6N2E2_5192	0.46	-0.0
5,987,664	-		Pf6N2E2_5192	0.46	-0.4
5,987,732	+		Pf6N2E2_5192	0.52	-0.7
5,987,733	-		Pf6N2E2_5192	0.52	-1.3
5,987,810	+		Pf6N2E2_5192	0.59	+0.2
5,987,811	-		Pf6N2E2_5192	0.59	-0.5
5,987,834	+		Pf6N2E2_5192	0.61	-0.2
5,987,835	-		Pf6N2E2_5192	0.61	+0.8
5,987,906	+		Pf6N2E2_5192	0.67	-0.3
5,987,914	-		Pf6N2E2_5192	0.68	+0.2
5,987,914	-		Pf6N2E2_5192	0.68	-0.6
5,987,914	-		Pf6N2E2_5192	0.68	+1.6
5,987,914	-		Pf6N2E2_5192	0.68	+0.8
5,987,914	-		Pf6N2E2_5192	0.68	+0.3
5,987,914	-		Pf6N2E2_5192	0.68	+0.2
5,987,915	+		Pf6N2E2_5192	0.68	+0.7
5,987,915	+		Pf6N2E2_5192	0.68	+0.9
5,987,915	+		Pf6N2E2_5192	0.68	-0.9
5,987,916	-		Pf6N2E2_5192	0.68	+1.2
5,987,916	-		Pf6N2E2_5192	0.68	-0.6
5,987,957	+		Pf6N2E2_5192	0.72	-0.5
5,987,957	+		Pf6N2E2_5192	0.72	-1.6
5,987,957	+		Pf6N2E2_5192	0.72	-0.3
5,987,958	-		Pf6N2E2_5192	0.72	+0.3
5,988,032	+		Pf6N2E2_5192	0.78	-0.2
5,988,032	+		Pf6N2E2_5192	0.78	+0.5
5,988,032	+		Pf6N2E2_5192	0.78	-0.3
5,988,032	+		Pf6N2E2_5192	0.78	+0.2
5,988,032	+		Pf6N2E2_5192	0.78	-0.7
5,988,032	+		Pf6N2E2_5192	0.78	+0.5
5,988,032	+		Pf6N2E2_5192	0.78	+0.2
5,988,032	+		Pf6N2E2_5192	0.78	-0.2
5,988,032	+		Pf6N2E2_5192	0.78	-0.5
5,988,032	+		Pf6N2E2_5192	0.78	+0.9
5,988,033	-		Pf6N2E2_5192	0.78	+0.3
5,988,033	-		Pf6N2E2_5192	0.78	+0.5
5,988,033	-		Pf6N2E2_5192	0.78	-0.4
5,988,107	+		Pf6N2E2_5192	0.85	+0.2
5,988,107	+		Pf6N2E2_5192	0.85	-0.2
5,988,107	+		Pf6N2E2_5192	0.85	+0.7
5,988,107	+		Pf6N2E2_5192	0.85	+0.5
5,988,107	+		Pf6N2E2_5192	0.85	+0.1
5,988,108	-		Pf6N2E2_5192	0.85	-0.2
5,988,108	-		Pf6N2E2_5192	0.85	+0.6
5,988,108	-		Pf6N2E2_5192	0.85	+0.7
5,988,212	-				+0.6
5,988,212	-				+0.0
5,988,212	-				-0.4
5,988,269	-				+0.3
5,988,269	-				+0.4
5,988,269	-				-0.5
5,988,334	+				-0.7
5,988,334	+				+0.0
5,988,420	+				-0.4
5,988,420	+				+1.4
5,988,420	+				-0.2
5,988,421	-				-0.7
5,988,421	-				+1.0
5,988,469	+				-0.6
5,988,549	+		Pf6N2E2_5193	0.10	+0.5
5,988,549	+		Pf6N2E2_5193	0.10	+0.2
5,988,549	+		Pf6N2E2_5193	0.10	-0.0
5,988,549	+		Pf6N2E2_5193	0.10	+0.4
5,988,549	+		Pf6N2E2_5193	0.10	-0.6
5,988,549	+		Pf6N2E2_5193	0.10	+0.8
5,988,549	+		Pf6N2E2_5193	0.10	-1.0
5,988,549	+		Pf6N2E2_5193	0.10	+0.4
5,988,549	+		Pf6N2E2_5193	0.10	+0.5
5,988,549	+		Pf6N2E2_5193	0.10	+1.0
5,988,549	+		Pf6N2E2_5193	0.10	+0.1
5,988,549	+		Pf6N2E2_5193	0.10	+0.7
5,988,550	-		Pf6N2E2_5193	0.10	-0.5
5,988,550	-		Pf6N2E2_5193	0.10	+0.6
5,988,550	-		Pf6N2E2_5193	0.10	+0.1
5,988,550	-		Pf6N2E2_5193	0.10	+0.3
5,988,550	-		Pf6N2E2_5193	0.10	-0.1
5,988,550	-		Pf6N2E2_5193	0.10	-0.6
5,988,550	-		Pf6N2E2_5193	0.10	+0.2
5,988,550	-		Pf6N2E2_5193	0.10	-0.3
5,988,550	-		Pf6N2E2_5193	0.10	-1.1
5,988,550	-		Pf6N2E2_5193	0.10	+0.7
5,988,550	-		Pf6N2E2_5193	0.10	-1.1
5,988,550	-		Pf6N2E2_5193	0.10	-0.0
5,988,550	-		Pf6N2E2_5193	0.10	-0.3
5,988,550	-		Pf6N2E2_5193	0.10	-0.7
5,988,563	-		Pf6N2E2_5193	0.11	+0.1
5,988,563	-		Pf6N2E2_5193	0.11	-0.1
5,988,591	+		Pf6N2E2_5193	0.13	-0.0
5,988,591	+		Pf6N2E2_5193	0.13	-0.1
5,988,591	+		Pf6N2E2_5193	0.13	+1.2
5,988,591	+		Pf6N2E2_5193	0.13	+0.8
5,988,591	+		Pf6N2E2_5193	0.13	-0.7
5,988,591	+		Pf6N2E2_5193	0.13	+0.0
5,988,591	+		Pf6N2E2_5193	0.13	+0.3
5,988,592	-		Pf6N2E2_5193	0.13	-1.0
5,988,592	-		Pf6N2E2_5193	0.13	+1.1
5,988,592	-		Pf6N2E2_5193	0.13	+0.5
5,988,592	-		Pf6N2E2_5193	0.13	+0.4
5,988,592	-		Pf6N2E2_5193	0.13	-0.1
5,988,592	-		Pf6N2E2_5193	0.13	-0.2
5,988,592	-		Pf6N2E2_5193	0.13	+0.9
5,988,592	-		Pf6N2E2_5193	0.13	-0.3
5,988,592	-		Pf6N2E2_5193	0.13	+0.4
5,988,592	-		Pf6N2E2_5193	0.13	+0.1
5,988,618	+		Pf6N2E2_5193	0.15	-0.3
5,988,618	+		Pf6N2E2_5193	0.15	-0.2
5,988,618	+		Pf6N2E2_5193	0.15	+0.5
5,988,618	+		Pf6N2E2_5193	0.15	+0.3
5,988,618	+		Pf6N2E2_5193	0.15	-0.3
5,988,618	+		Pf6N2E2_5193	0.15	+0.4
5,988,619	-		Pf6N2E2_5193	0.15	-1.5
5,988,619	-		Pf6N2E2_5193	0.15	+0.6
5,988,619	-		Pf6N2E2_5193	0.15	+0.5
5,988,619	-		Pf6N2E2_5193	0.15	-0.4
5,988,619	-		Pf6N2E2_5193	0.15	+0.0
5,988,648	+		Pf6N2E2_5193	0.17	+0.6
5,988,648	+		Pf6N2E2_5193	0.17	+1.8
5,988,649	-		Pf6N2E2_5193	0.17	+0.4
5,988,649	-		Pf6N2E2_5193	0.17	+0.7
5,988,649	-		Pf6N2E2_5193	0.17	+0.6
5,988,649	-		Pf6N2E2_5193	0.17	-0.6
5,988,698	+		Pf6N2E2_5193	0.20	+0.4
5,988,698	+		Pf6N2E2_5193	0.20	+1.8
5,988,698	+		Pf6N2E2_5193	0.20	+0.3
5,988,698	+		Pf6N2E2_5193	0.20	-0.2
5,988,698	+		Pf6N2E2_5193	0.20	+0.8
5,988,699	-		Pf6N2E2_5193	0.20	-0.1
5,988,699	-		Pf6N2E2_5193	0.20	+0.3
5,988,732	+		Pf6N2E2_5193	0.22	-0.8
5,988,732	+		Pf6N2E2_5193	0.22	-2.1
5,988,732	+		Pf6N2E2_5193	0.22	+0.0
5,988,732	+		Pf6N2E2_5193	0.22	-0.1
5,988,732	+		Pf6N2E2_5193	0.22	-0.4
5,988,733	-		Pf6N2E2_5193	0.23	+0.5
5,988,733	-		Pf6N2E2_5193	0.23	+0.0
5,988,733	-		Pf6N2E2_5193	0.23	-0.1
5,988,837	+		Pf6N2E2_5193	0.30	-0.1
5,988,838	-		Pf6N2E2_5193	0.30	-0.7
5,988,838	-		Pf6N2E2_5193	0.30	+0.5
5,988,838	-		Pf6N2E2_5193	0.30	+1.3
5,988,952	+		Pf6N2E2_5193	0.37	-1.9
5,988,953	-		Pf6N2E2_5193	0.37	+1.2
5,988,953	-		Pf6N2E2_5193	0.37	+0.4
5,988,954	+		Pf6N2E2_5193	0.37	-0.0
5,988,954	+		Pf6N2E2_5193	0.37	+0.1
5,988,954	+		Pf6N2E2_5193	0.37	+0.6
5,988,954	+		Pf6N2E2_5193	0.37	-0.1
5,988,955	-		Pf6N2E2_5193	0.38	+1.3
5,988,955	-		Pf6N2E2_5193	0.38	+0.9
5,988,955	-		Pf6N2E2_5193	0.38	+0.9
5,988,955	-		Pf6N2E2_5193	0.38	+0.5
5,988,955	-		Pf6N2E2_5193	0.38	-0.7
5,988,955	-		Pf6N2E2_5193	0.38	-0.1
5,988,955	-		Pf6N2E2_5193	0.38	-0.2
5,989,362	+		Pf6N2E2_5193	0.65	-0.2
5,989,362	+		Pf6N2E2_5193	0.65	+1.1
5,989,363	-		Pf6N2E2_5193	0.65	+0.3
5,989,386	+		Pf6N2E2_5193	0.67	+0.5
5,989,823	+				-0.2
5,989,823	+				+0.5
5,989,823	+				+1.0
5,989,824	-				+0.5
5,989,834	+				-0.1
5,989,834	+				-0.1
5,989,835	-				-0.1
5,989,835	-				+0.2
5,989,835	-				+0.7
5,989,835	-				+0.6
5,989,886	+				+0.3
5,989,886	+				+0.8
5,989,886	+				+0.4
5,989,887	-				+0.3
5,989,887	-				+0.7
5,989,887	-				+0.1
5,989,887	-				+0.5
5,989,887	-				+0.7
5,989,887	-				+0.5
5,989,887	-				+0.7
5,989,887	-				-0.4
5,989,887	-				+0.1
5,989,887	-				-0.4
5,989,887	-				+0.6
5,989,969	-				-0.1
5,990,008	+				-1.3
5,990,008	+				-0.3
5,990,009	-				-0.6
5,990,039	+				+1.9
5,990,039	+				-0.8
5,990,039	+				-0.2
5,990,377	+		Pf6N2E2_5194	0.28	+0.3
5,990,377	+		Pf6N2E2_5194	0.28	+1.9
5,990,378	-		Pf6N2E2_5194	0.29	+0.6
5,990,378	-		Pf6N2E2_5194	0.29	+0.6
5,990,415	+		Pf6N2E2_5194	0.31	-0.7
5,990,416	-		Pf6N2E2_5194	0.31	+0.8
5,990,416	-		Pf6N2E2_5194	0.31	+0.1
5,990,416	-		Pf6N2E2_5194	0.31	-1.7
5,990,416	-		Pf6N2E2_5194	0.31	+1.1
5,990,524	+		Pf6N2E2_5194	0.39	+0.6
5,990,524	+		Pf6N2E2_5194	0.39	-0.3
5,990,525	-		Pf6N2E2_5194	0.39	+0.8
5,990,525	-		Pf6N2E2_5194	0.39	+0.4
5,990,525	-		Pf6N2E2_5194	0.39	+0.6
5,990,525	-		Pf6N2E2_5194	0.39	+0.6
5,990,619	+		Pf6N2E2_5194	0.46	+0.5
5,990,620	-		Pf6N2E2_5194	0.46	+0.8
5,990,620	-		Pf6N2E2_5194	0.46	-1.3
5,990,620	-		Pf6N2E2_5194	0.46	+0.2
5,990,620	-		Pf6N2E2_5194	0.46	+0.0
5,990,634	+		Pf6N2E2_5194	0.47	+0.1
5,990,635	-		Pf6N2E2_5194	0.47	+1.0
5,990,693	+		Pf6N2E2_5194	0.52	-0.2
5,990,694	-		Pf6N2E2_5194	0.52	+0.4
5,990,733	+		Pf6N2E2_5194	0.55	+1.2
5,990,733	+		Pf6N2E2_5194	0.55	+0.2
5,990,733	+		Pf6N2E2_5194	0.55	+1.3
5,990,733	+		Pf6N2E2_5194	0.55	+1.3
5,990,766	+		Pf6N2E2_5194	0.57	-0.5
5,990,766	+		Pf6N2E2_5194	0.57	-1.1
5,990,766	+		Pf6N2E2_5194	0.57	-0.2
5,990,766	+		Pf6N2E2_5194	0.57	+0.2
5,990,766	+		Pf6N2E2_5194	0.57	+0.2