Strain Fitness in Pseudomonas sp. S08-1 around OH686_14515

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_14510 and OH686_14515 overlap by 4 nucleotidesOH686_14515 and OH686_14520 are separated by 14 nucleotidesOH686_14520 and OH686_14525 are separated by 34 nucleotides OH686_14510: OH686_14510 - Adenylate cyclase , at 3,033,364 to 3,035,205 _14510 OH686_14515: OH686_14515 - hypothetical protein, at 3,035,202 to 3,035,705 _14515 OH686_14520: OH686_14520 - hypothetical protein, at 3,035,720 to 3,036,619 _14520 OH686_14525: OH686_14525 - hypothetical protein, at 3,036,654 to 3,038,600 _14525 Position (kb) 3035 3036Strain fitness (log2 ratio) -2 -1 0 1 2at 3034.210 kb on + strand, within OH686_14510at 3034.211 kb on - strand, within OH686_14510at 3034.211 kb on - strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.441 kb on + strand, within OH686_14510at 3034.442 kb on - strand, within OH686_14510at 3034.442 kb on - strand, within OH686_14510at 3034.442 kb on - strand, within OH686_14510at 3034.442 kb on - strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.445 kb on + strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.446 kb on - strand, within OH686_14510at 3034.451 kb on + strand, within OH686_14510at 3034.451 kb on + strand, within OH686_14510at 3034.451 kb on + strand, within OH686_14510at 3034.451 kb on + strand, within OH686_14510at 3034.451 kb on + strand, within OH686_14510at 3034.531 kb on + strand, within OH686_14510at 3034.531 kb on + strand, within OH686_14510at 3034.531 kb on + strand, within OH686_14510at 3034.532 kb on - strand, within OH686_14510at 3034.532 kb on - strand, within OH686_14510at 3034.560 kb on + strand, within OH686_14510at 3034.560 kb on + strand, within OH686_14510at 3034.560 kb on + strand, within OH686_14510at 3034.561 kb on - strand, within OH686_14510at 3034.561 kb on - strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.747 kb on + strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3034.748 kb on - strand, within OH686_14510at 3035.003 kb on - strand, within OH686_14510at 3035.003 kb on - strand, within OH686_14510at 3035.003 kb on - strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.008 kb on + strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.009 kb on - strand, within OH686_14510at 3035.201 kb on + strandat 3035.201 kb on + strandat 3035.201 kb on + strandat 3035.202 kb on - strandat 3035.210 kb on + strandat 3035.210 kb on + strandat 3035.210 kb on + strandat 3035.210 kb on + strandat 3035.210 kb on + strandat 3035.210 kb on + strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.211 kb on - strandat 3035.397 kb on + strand, within OH686_14515at 3035.397 kb on + strand, within OH686_14515at 3035.397 kb on + strand, within OH686_14515at 3035.398 kb on - strand, within OH686_14515at 3035.625 kb on + strand, within OH686_14515at 3035.625 kb on + strand, within OH686_14515at 3035.626 kb on - strand, within OH686_14515at 3035.626 kb on - strand, within OH686_14515at 3035.961 kb on + strand, within OH686_14520at 3035.962 kb on - strand, within OH686_14520at 3035.962 kb on - strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.969 kb on + strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3035.970 kb on - strand, within OH686_14520at 3036.065 kb on + strand, within OH686_14520at 3036.065 kb on + strand, within OH686_14520at 3036.066 kb on - strand, within OH686_14520at 3036.066 kb on - strand, within OH686_14520at 3036.066 kb on - strand, within OH686_14520at 3036.066 kb on - strand, within OH686_14520at 3036.066 kb on - strand, within OH686_14520at 3036.083 kb on + strand, within OH686_14520at 3036.084 kb on - strand, within OH686_14520at 3036.084 kb on - strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.332 kb on + strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.333 kb on - strand, within OH686_14520at 3036.417 kb on - strand, within OH686_14520at 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.536 kb on + strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.537 kb on - strandat 3036.542 kb on + strandat 3036.542 kb on + strandat 3036.542 kb on + strandat 3036.543 kb on - strandat 3036.543 kb on - strandat 3036.543 kb on - strandat 3036.543 kb on - strandat 3036.543 kb on - strandat 3036.682 kb on + strandat 3036.682 kb on + strandat 3036.682 kb on + strandat 3036.683 kb on - strandat 3036.703 kb on + strandat 3036.703 kb on + strandat 3036.703 kb on + strandat 3036.704 kb on - strandat 3036.704 kb on - strandat 3036.704 kb on - strandat 3036.704 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,034,210 + OH686_14510 0.46 -1.1
3,034,211 - OH686_14510 0.46 -0.5
3,034,211 - OH686_14510 0.46 +0.3
3,034,441 + OH686_14510 0.58 -0.1
3,034,441 + OH686_14510 0.58 -0.4
3,034,441 + OH686_14510 0.58 -0.8
3,034,441 + OH686_14510 0.58 +0.2
3,034,441 + OH686_14510 0.58 +0.1
3,034,441 + OH686_14510 0.58 -0.3
3,034,441 + OH686_14510 0.58 -0.1
3,034,441 + OH686_14510 0.58 +0.8
3,034,441 + OH686_14510 0.58 -0.8
3,034,441 + OH686_14510 0.58 -0.5
3,034,442 - OH686_14510 0.59 +0.3
3,034,442 - OH686_14510 0.59 +0.1
3,034,442 - OH686_14510 0.59 -0.5
3,034,442 - OH686_14510 0.59 +0.0
3,034,445 + OH686_14510 0.59 +0.4
3,034,445 + OH686_14510 0.59 -1.2
3,034,445 + OH686_14510 0.59 -0.1
3,034,445 + OH686_14510 0.59 +0.3
3,034,445 + OH686_14510 0.59 -0.7
3,034,445 + OH686_14510 0.59 +0.4
3,034,445 + OH686_14510 0.59 +0.8
3,034,445 + OH686_14510 0.59 +0.9
3,034,445 + OH686_14510 0.59 +0.2
3,034,445 + OH686_14510 0.59 -0.3
3,034,445 + OH686_14510 0.59 -0.0
3,034,445 + OH686_14510 0.59 +0.5
3,034,445 + OH686_14510 0.59 +0.0
3,034,445 + OH686_14510 0.59 +1.5
3,034,445 + OH686_14510 0.59 +1.0
3,034,445 + OH686_14510 0.59 -0.0
3,034,445 + OH686_14510 0.59 +0.8
3,034,445 + OH686_14510 0.59 +0.8
3,034,445 + OH686_14510 0.59 +0.1
3,034,445 + OH686_14510 0.59 -1.1
3,034,446 - OH686_14510 0.59 -0.6
3,034,446 - OH686_14510 0.59 -1.4
3,034,446 - OH686_14510 0.59 +0.5
3,034,446 - OH686_14510 0.59 +0.4
3,034,446 - OH686_14510 0.59 -0.2
3,034,446 - OH686_14510 0.59 -0.3
3,034,446 - OH686_14510 0.59 -0.3
3,034,446 - OH686_14510 0.59 +0.2
3,034,446 - OH686_14510 0.59 -0.5
3,034,446 - OH686_14510 0.59 +0.6
3,034,446 - OH686_14510 0.59 -0.6
3,034,446 - OH686_14510 0.59 -1.2
3,034,446 - OH686_14510 0.59 -0.1
3,034,446 - OH686_14510 0.59 +0.2
3,034,446 - OH686_14510 0.59 +0.5
3,034,446 - OH686_14510 0.59 +0.4
3,034,451 + OH686_14510 0.59 -0.3
3,034,451 + OH686_14510 0.59 +0.4
3,034,451 + OH686_14510 0.59 +0.4
3,034,451 + OH686_14510 0.59 +0.6
3,034,451 + OH686_14510 0.59 +0.2
3,034,531 + OH686_14510 0.63 +1.0
3,034,531 + OH686_14510 0.63 +1.2
3,034,531 + OH686_14510 0.63 -0.0
3,034,532 - OH686_14510 0.63 -0.5
3,034,532 - OH686_14510 0.63 -0.2
3,034,560 + OH686_14510 0.65 -1.0
3,034,560 + OH686_14510 0.65 +0.0
3,034,560 + OH686_14510 0.65 -0.1
3,034,561 - OH686_14510 0.65 +1.4
3,034,561 - OH686_14510 0.65 -0.4
3,034,747 + OH686_14510 0.75 -0.1
3,034,747 + OH686_14510 0.75 -0.7
3,034,747 + OH686_14510 0.75 +0.4
3,034,747 + OH686_14510 0.75 -0.4
3,034,747 + OH686_14510 0.75 +0.5
3,034,747 + OH686_14510 0.75 +0.1
3,034,747 + OH686_14510 0.75 -0.1
3,034,747 + OH686_14510 0.75 +0.5
3,034,747 + OH686_14510 0.75 +0.6
3,034,747 + OH686_14510 0.75 +0.1
3,034,747 + OH686_14510 0.75 -1.8
3,034,747 + OH686_14510 0.75 +0.1
3,034,748 - OH686_14510 0.75 -0.1
3,034,748 - OH686_14510 0.75 +0.4
3,034,748 - OH686_14510 0.75 +1.0
3,034,748 - OH686_14510 0.75 -1.3
3,034,748 - OH686_14510 0.75 -0.2
3,034,748 - OH686_14510 0.75 -0.3
3,034,748 - OH686_14510 0.75 +0.5
3,034,748 - OH686_14510 0.75 +0.6
3,035,003 - OH686_14510 0.89 -1.0
3,035,003 - OH686_14510 0.89 +0.1
3,035,003 - OH686_14510 0.89 -1.1
3,035,008 + OH686_14510 0.89 -0.8
3,035,008 + OH686_14510 0.89 +1.5
3,035,008 + OH686_14510 0.89 -0.7
3,035,008 + OH686_14510 0.89 -0.4
3,035,008 + OH686_14510 0.89 +0.5
3,035,008 + OH686_14510 0.89 +0.4
3,035,008 + OH686_14510 0.89 -1.3
3,035,008 + OH686_14510 0.89 -1.4
3,035,008 + OH686_14510 0.89 +0.3
3,035,008 + OH686_14510 0.89 +1.0
3,035,008 + OH686_14510 0.89 +1.7
3,035,008 + OH686_14510 0.89 -0.3
3,035,008 + OH686_14510 0.89 +0.5
3,035,008 + OH686_14510 0.89 +0.9
3,035,009 - OH686_14510 0.89 +0.5
3,035,009 - OH686_14510 0.89 -0.3
3,035,009 - OH686_14510 0.89 +0.9
3,035,009 - OH686_14510 0.89 -0.3
3,035,009 - OH686_14510 0.89 +0.1
3,035,009 - OH686_14510 0.89 -0.0
3,035,009 - OH686_14510 0.89 -0.1
3,035,009 - OH686_14510 0.89 -0.3
3,035,009 - OH686_14510 0.89 -0.2
3,035,009 - OH686_14510 0.89 +0.0
3,035,009 - OH686_14510 0.89 +0.4
3,035,009 - OH686_14510 0.89 -0.0
3,035,009 - OH686_14510 0.89 +0.6
3,035,009 - OH686_14510 0.89 -0.5
3,035,009 - OH686_14510 0.89 -1.3
3,035,009 - OH686_14510 0.89 -0.1
3,035,009 - OH686_14510 0.89 -0.3
3,035,009 - OH686_14510 0.89 +0.8
3,035,009 - OH686_14510 0.89 +0.3
3,035,201 + -1.1
3,035,201 + -1.3
3,035,201 + +0.4
3,035,202 - -0.4
3,035,210 + +0.9
3,035,210 + -1.0
3,035,210 + +0.8
3,035,210 + +0.6
3,035,210 + +0.8
3,035,210 + -0.4
3,035,211 - +1.2
3,035,211 - +0.3
3,035,211 - -0.2
3,035,211 - +0.3
3,035,211 - -0.2
3,035,211 - -0.1
3,035,211 - -0.6
3,035,211 - -0.6
3,035,397 + OH686_14515 0.39 -0.3
3,035,397 + OH686_14515 0.39 +0.0
3,035,397 + OH686_14515 0.39 +1.2
3,035,398 - OH686_14515 0.39 +0.5
3,035,625 + OH686_14515 0.84 -0.2
3,035,625 + OH686_14515 0.84 +0.4
3,035,626 - OH686_14515 0.84 +0.2
3,035,626 - OH686_14515 0.84 +0.4
3,035,961 + OH686_14520 0.27 +0.5
3,035,962 - OH686_14520 0.27 +0.4
3,035,962 - OH686_14520 0.27 +0.6
3,035,969 + OH686_14520 0.28 -0.1
3,035,969 + OH686_14520 0.28 +0.4
3,035,969 + OH686_14520 0.28 -1.9
3,035,969 + OH686_14520 0.28 -0.6
3,035,969 + OH686_14520 0.28 +1.2
3,035,969 + OH686_14520 0.28 +1.7
3,035,969 + OH686_14520 0.28 +0.9
3,035,969 + OH686_14520 0.28 +0.5
3,035,970 - OH686_14520 0.28 -0.7
3,035,970 - OH686_14520 0.28 -0.5
3,035,970 - OH686_14520 0.28 +0.1
3,035,970 - OH686_14520 0.28 +0.1
3,035,970 - OH686_14520 0.28 +0.5
3,035,970 - OH686_14520 0.28 -0.6
3,035,970 - OH686_14520 0.28 -1.1
3,035,970 - OH686_14520 0.28 -0.3
3,035,970 - OH686_14520 0.28 +2.3
3,035,970 - OH686_14520 0.28 +0.0
3,036,065 + OH686_14520 0.38 +0.5
3,036,065 + OH686_14520 0.38 -0.2
3,036,066 - OH686_14520 0.38 -0.1
3,036,066 - OH686_14520 0.38 -0.1
3,036,066 - OH686_14520 0.38 -1.3
3,036,066 - OH686_14520 0.38 +0.2
3,036,066 - OH686_14520 0.38 -0.1
3,036,083 + OH686_14520 0.40 +0.6
3,036,084 - OH686_14520 0.40 -1.0
3,036,084 - OH686_14520 0.40 -0.2
3,036,332 + OH686_14520 0.68 +0.1
3,036,332 + OH686_14520 0.68 -0.2
3,036,332 + OH686_14520 0.68 +1.2
3,036,332 + OH686_14520 0.68 -0.3
3,036,332 + OH686_14520 0.68 +1.3
3,036,332 + OH686_14520 0.68 +0.9
3,036,332 + OH686_14520 0.68 +0.3
3,036,332 + OH686_14520 0.68 +0.1
3,036,333 - OH686_14520 0.68 -0.9
3,036,333 - OH686_14520 0.68 -0.8
3,036,333 - OH686_14520 0.68 -0.3
3,036,333 - OH686_14520 0.68 -0.1
3,036,333 - OH686_14520 0.68 -0.1
3,036,333 - OH686_14520 0.68 -1.6
3,036,417 - OH686_14520 0.77 +2.2
3,036,536 + +0.9
3,036,536 + +0.5
3,036,536 + +2.0
3,036,536 + -1.6
3,036,536 + -0.7
3,036,536 + +0.5
3,036,536 + +0.6
3,036,536 + -0.6
3,036,536 + -0.9
3,036,536 + -0.3
3,036,536 + +0.1
3,036,536 + +0.0
3,036,536 + -0.4
3,036,536 + +0.0
3,036,536 + -0.8
3,036,536 + -0.0
3,036,537 - +0.3
3,036,537 - +0.3
3,036,537 - -0.7
3,036,537 - +0.0
3,036,537 - +0.4
3,036,537 - +0.3
3,036,537 - +1.2
3,036,537 - -0.7
3,036,542 + +0.2
3,036,542 + +0.3
3,036,542 + -0.1
3,036,543 - -0.5
3,036,543 - +0.7
3,036,543 - +0.1
3,036,543 - +0.5
3,036,543 - -0.1
3,036,682 + +0.6
3,036,682 + -0.8
3,036,682 + +0.7
3,036,683 - -0.4
3,036,703 + +0.7
3,036,703 + +0.3
3,036,703 + +0.7
3,036,704 - -0.5
3,036,704 - -0.4
3,036,704 - +0.2
3,036,704 - +0.4

Or see this region's nucleotide sequence