Strain Fitness in Pseudomonas sp. S08-1 around OH686_02710

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_02700 and OH686_02705 are separated by 18 nucleotidesOH686_02705 and OH686_02710 overlap by 1 nucleotidesOH686_02710 and OH686_02715 are separated by 39 nucleotides OH686_02700: OH686_02700 - Flagellar motor rotation protein MotB, at 568,967 to 569,851 _02700 OH686_02705: OH686_02705 - Flagellar motor rotation protein MotA, at 569,870 to 570,610 _02705 OH686_02710: OH686_02710 - Chemotaxis response regulator protein-glutamate methylesterase CheB , at 570,610 to 571,728 _02710 OH686_02715: OH686_02715 - Signal transduction histidine kinase CheA, at 571,768 to 573,984 _02715 Position (kb) 570 571 572Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 569.687 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.718 kb on + strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.719 kb on - strand, within OH686_02700at 569.748 kb on + strand, within OH686_02700at 569.748 kb on + strand, within OH686_02700at 569.748 kb on + strand, within OH686_02700at 569.749 kb on - strand, within OH686_02700at 569.749 kb on - strand, within OH686_02700at 569.749 kb on - strand, within OH686_02700at 569.749 kb on - strand, within OH686_02700at 569.749 kb on - strand, within OH686_02700at 569.793 kb on + strandat 570.039 kb on + strand, within OH686_02705at 570.039 kb on + strand, within OH686_02705at 570.039 kb on + strand, within OH686_02705at 570.039 kb on + strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.040 kb on - strand, within OH686_02705at 570.157 kb on - strand, within OH686_02705at 570.213 kb on + strand, within OH686_02705at 570.213 kb on + strand, within OH686_02705at 570.213 kb on + strand, within OH686_02705at 570.213 kb on + strand, within OH686_02705at 570.213 kb on + strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.214 kb on - strand, within OH686_02705at 570.292 kb on - strand, within OH686_02705at 570.549 kb on + strandat 570.549 kb on + strandat 570.549 kb on + strandat 570.549 kb on + strandat 570.549 kb on + strandat 570.549 kb on + strandat 570.549 kb on + strandat 570.550 kb on - strandat 570.550 kb on - strandat 570.550 kb on - strandat 570.550 kb on - strandat 570.550 kb on - strandat 570.550 kb on - strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.602 kb on + strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.603 kb on - strandat 570.615 kb on + strandat 570.615 kb on + strandat 570.616 kb on - strandat 570.616 kb on - strandat 570.616 kb on - strandat 570.616 kb on - strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.704 kb on + strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.705 kb on - strandat 570.872 kb on + strand, within OH686_02710at 570.872 kb on + strand, within OH686_02710at 570.872 kb on + strand, within OH686_02710at 570.872 kb on + strand, within OH686_02710at 570.872 kb on + strand, within OH686_02710at 570.872 kb on + strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.873 kb on - strand, within OH686_02710at 570.900 kb on + strand, within OH686_02710at 570.900 kb on + strand, within OH686_02710at 570.901 kb on - strand, within OH686_02710at 570.901 kb on - strand, within OH686_02710at 571.166 kb on + strand, within OH686_02710at 571.166 kb on + strand, within OH686_02710at 571.166 kb on + strand, within OH686_02710at 571.166 kb on + strand, within OH686_02710at 571.167 kb on - strand, within OH686_02710at 571.167 kb on - strand, within OH686_02710at 571.167 kb on - strand, within OH686_02710at 571.173 kb on + strand, within OH686_02710at 571.173 kb on + strand, within OH686_02710at 571.173 kb on + strand, within OH686_02710at 571.173 kb on + strand, within OH686_02710at 571.173 kb on + strand, within OH686_02710at 571.174 kb on - strand, within OH686_02710at 571.174 kb on - strand, within OH686_02710at 571.218 kb on + strand, within OH686_02710at 571.219 kb on - strand, within OH686_02710at 571.219 kb on - strand, within OH686_02710at 571.219 kb on - strand, within OH686_02710at 571.219 kb on - strand, within OH686_02710at 571.219 kb on - strand, within OH686_02710at 571.322 kb on + strand, within OH686_02710at 571.322 kb on + strand, within OH686_02710at 571.323 kb on - strand, within OH686_02710at 571.347 kb on + strand, within OH686_02710at 571.347 kb on + strand, within OH686_02710at 571.347 kb on + strand, within OH686_02710at 571.347 kb on + strand, within OH686_02710at 571.347 kb on + strand, within OH686_02710at 571.348 kb on - strand, within OH686_02710at 571.348 kb on - strand, within OH686_02710at 571.348 kb on - strand, within OH686_02710at 571.348 kb on - strand, within OH686_02710at 571.421 kb on + strand, within OH686_02710at 571.421 kb on + strand, within OH686_02710at 571.422 kb on - strand, within OH686_02710at 571.562 kb on + strand, within OH686_02710at 571.562 kb on + strand, within OH686_02710at 571.728 kb on + strandat 571.728 kb on + strandat 571.729 kb on - strandat 571.729 kb on - strandat 571.729 kb on - strandat 571.845 kb on + strandat 571.845 kb on + strandat 572.027 kb on + strand, within OH686_02715at 572.027 kb on + strand, within OH686_02715at 572.027 kb on + strand, within OH686_02715at 572.027 kb on + strand, within OH686_02715at 572.027 kb on + strand, within OH686_02715at 572.027 kb on + strand, within OH686_02715at 572.028 kb on - strand, within OH686_02715at 572.028 kb on - strand, within OH686_02715at 572.056 kb on + strand, within OH686_02715at 572.056 kb on + strand, within OH686_02715at 572.056 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.360 kb on + strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.361 kb on - strand, within OH686_02715at 572.509 kb on + strand, within OH686_02715at 572.509 kb on + strand, within OH686_02715at 572.509 kb on + strand, within OH686_02715at 572.509 kb on + strand, within OH686_02715at 572.509 kb on + strand, within OH686_02715at 572.510 kb on - strand, within OH686_02715at 572.510 kb on - strand, within OH686_02715at 572.510 kb on - strand, within OH686_02715at 572.510 kb on - strand, within OH686_02715at 572.726 kb on - strand, within OH686_02715at 572.726 kb on - strand, within OH686_02715at 572.726 kb on - strand, within OH686_02715at 572.726 kb on - strand, within OH686_02715

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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569,687 + OH686_02700 0.81 -0.2
569,718 + OH686_02700 0.85 +0.4
569,718 + OH686_02700 0.85 -1.4
569,718 + OH686_02700 0.85 +0.1
569,718 + OH686_02700 0.85 +0.7
569,718 + OH686_02700 0.85 +1.1
569,718 + OH686_02700 0.85 -0.2
569,718 + OH686_02700 0.85 +0.8
569,718 + OH686_02700 0.85 -0.6
569,718 + OH686_02700 0.85 +0.1
569,718 + OH686_02700 0.85 -0.0
569,718 + OH686_02700 0.85 +0.1
569,718 + OH686_02700 0.85 -0.8
569,719 - OH686_02700 0.85 -0.2
569,719 - OH686_02700 0.85 +0.0
569,719 - OH686_02700 0.85 -0.1
569,719 - OH686_02700 0.85 +0.2
569,719 - OH686_02700 0.85 +1.6
569,719 - OH686_02700 0.85 -0.8
569,719 - OH686_02700 0.85 -0.3
569,719 - OH686_02700 0.85 -0.6
569,719 - OH686_02700 0.85 -1.0
569,719 - OH686_02700 0.85 -0.0
569,719 - OH686_02700 0.85 +0.5
569,719 - OH686_02700 0.85 +0.4
569,719 - OH686_02700 0.85 -0.1
569,719 - OH686_02700 0.85 -0.0
569,719 - OH686_02700 0.85 -0.0
569,719 - OH686_02700 0.85 +0.4
569,719 - OH686_02700 0.85 -0.2
569,719 - OH686_02700 0.85 -1.5
569,719 - OH686_02700 0.85 +0.2
569,748 + OH686_02700 0.88 -0.2
569,748 + OH686_02700 0.88 +0.7
569,748 + OH686_02700 0.88 -2.0
569,749 - OH686_02700 0.88 -0.1
569,749 - OH686_02700 0.88 -0.9
569,749 - OH686_02700 0.88 -0.1
569,749 - OH686_02700 0.88 +0.7
569,749 - OH686_02700 0.88 -0.0
569,793 + -0.3
570,039 + OH686_02705 0.23 +0.6
570,039 + OH686_02705 0.23 -0.5
570,039 + OH686_02705 0.23 +1.1
570,039 + OH686_02705 0.23 +0.4
570,040 - OH686_02705 0.23 +0.0
570,040 - OH686_02705 0.23 +0.8
570,040 - OH686_02705 0.23 +0.4
570,040 - OH686_02705 0.23 +0.6
570,040 - OH686_02705 0.23 +0.5
570,040 - OH686_02705 0.23 +0.6
570,040 - OH686_02705 0.23 -0.6
570,040 - OH686_02705 0.23 +0.7
570,040 - OH686_02705 0.23 +0.6
570,040 - OH686_02705 0.23 +0.8
570,157 - OH686_02705 0.39 -1.9
570,213 + OH686_02705 0.46 +0.5
570,213 + OH686_02705 0.46 +1.0
570,213 + OH686_02705 0.46 +0.4
570,213 + OH686_02705 0.46 +0.2
570,213 + OH686_02705 0.46 -0.3
570,214 - OH686_02705 0.46 +0.5
570,214 - OH686_02705 0.46 +0.4
570,214 - OH686_02705 0.46 +0.1
570,214 - OH686_02705 0.46 +0.1
570,214 - OH686_02705 0.46 +1.0
570,214 - OH686_02705 0.46 -0.2
570,292 - OH686_02705 0.57 -0.0
570,549 + -0.2
570,549 + +0.2
570,549 + -0.4
570,549 + +0.3
570,549 + +0.3
570,549 + +0.4
570,549 + -0.1
570,550 - +0.3
570,550 - +1.0
570,550 - -0.1
570,550 - +0.8
570,550 - +0.5
570,550 - +0.4
570,602 + +0.8
570,602 + +0.6
570,602 + +0.1
570,602 + -0.3
570,602 + -0.3
570,602 + -0.2
570,602 + +0.8
570,602 + +0.6
570,602 + -0.0
570,602 + +0.6
570,602 + +0.3
570,602 + +2.0
570,602 + +0.8
570,602 + -0.1
570,602 + +0.6
570,603 - +0.2
570,603 - +0.6
570,603 - -0.1
570,603 - +0.0
570,603 - +0.4
570,603 - -0.1
570,603 - +1.1
570,603 - +1.0
570,603 - -0.1
570,603 - +0.9
570,603 - -0.2
570,603 - -0.8
570,603 - -0.6
570,603 - +0.3
570,603 - -0.0
570,615 + +0.7
570,615 + +0.8
570,616 - -0.2
570,616 - +0.7
570,616 - +0.2
570,616 - -0.2
570,704 + +0.1
570,704 + -0.1
570,704 + -0.6
570,704 + -0.7
570,704 + +0.7
570,704 + +0.1
570,704 + -0.2
570,704 + +0.3
570,704 + -0.1
570,705 - +0.9
570,705 - -0.1
570,705 - +0.7
570,705 - +0.7
570,705 - +1.0
570,705 - +0.0
570,705 - +0.1
570,872 + OH686_02710 0.23 +0.3
570,872 + OH686_02710 0.23 +0.1
570,872 + OH686_02710 0.23 -0.1
570,872 + OH686_02710 0.23 -0.3
570,872 + OH686_02710 0.23 +0.0
570,872 + OH686_02710 0.23 -0.1
570,873 - OH686_02710 0.24 +0.1
570,873 - OH686_02710 0.24 +0.5
570,873 - OH686_02710 0.24 +0.1
570,873 - OH686_02710 0.24 +0.8
570,873 - OH686_02710 0.24 +0.5
570,873 - OH686_02710 0.24 -0.1
570,873 - OH686_02710 0.24 +0.8
570,873 - OH686_02710 0.24 +0.2
570,900 + OH686_02710 0.26 +1.6
570,900 + OH686_02710 0.26 +0.0
570,901 - OH686_02710 0.26 +0.9
570,901 - OH686_02710 0.26 +0.0
571,166 + OH686_02710 0.50 -0.5
571,166 + OH686_02710 0.50 +0.4
571,166 + OH686_02710 0.50 +0.6
571,166 + OH686_02710 0.50 +0.2
571,167 - OH686_02710 0.50 +0.2
571,167 - OH686_02710 0.50 -0.9
571,167 - OH686_02710 0.50 -0.1
571,173 + OH686_02710 0.50 -0.7
571,173 + OH686_02710 0.50 +0.6
571,173 + OH686_02710 0.50 -0.0
571,173 + OH686_02710 0.50 -0.3
571,173 + OH686_02710 0.50 +0.5
571,174 - OH686_02710 0.50 +0.1
571,174 - OH686_02710 0.50 -1.2
571,218 + OH686_02710 0.54 -0.7
571,219 - OH686_02710 0.54 -0.6
571,219 - OH686_02710 0.54 +0.4
571,219 - OH686_02710 0.54 +1.0
571,219 - OH686_02710 0.54 +0.3
571,219 - OH686_02710 0.54 +1.0
571,322 + OH686_02710 0.64 +0.9
571,322 + OH686_02710 0.64 +0.4
571,323 - OH686_02710 0.64 -0.4
571,347 + OH686_02710 0.66 +1.7
571,347 + OH686_02710 0.66 -0.8
571,347 + OH686_02710 0.66 -0.8
571,347 + OH686_02710 0.66 +0.7
571,347 + OH686_02710 0.66 +0.1
571,348 - OH686_02710 0.66 +0.8
571,348 - OH686_02710 0.66 -0.7
571,348 - OH686_02710 0.66 +0.3
571,348 - OH686_02710 0.66 -0.1
571,421 + OH686_02710 0.72 +0.0
571,421 + OH686_02710 0.72 -0.1
571,422 - OH686_02710 0.73 +0.2
571,562 + OH686_02710 0.85 +0.2
571,562 + OH686_02710 0.85 +0.4
571,728 + -0.5
571,728 + -0.5
571,729 - +0.3
571,729 - -0.1
571,729 - +0.3
571,845 + +0.4
571,845 + -0.4
572,027 + OH686_02715 0.12 +1.5
572,027 + OH686_02715 0.12 -0.6
572,027 + OH686_02715 0.12 +0.3
572,027 + OH686_02715 0.12 -1.0
572,027 + OH686_02715 0.12 -3.0
572,027 + OH686_02715 0.12 -0.2
572,028 - OH686_02715 0.12 +1.0
572,028 - OH686_02715 0.12 -0.3
572,056 + OH686_02715 0.13 +0.5
572,056 + OH686_02715 0.13 -1.1
572,056 + OH686_02715 0.13 +0.7
572,360 + OH686_02715 0.27 -0.4
572,360 + OH686_02715 0.27 -1.2
572,360 + OH686_02715 0.27 -1.4
572,360 + OH686_02715 0.27 +0.4
572,360 + OH686_02715 0.27 +0.0
572,360 + OH686_02715 0.27 -1.1
572,360 + OH686_02715 0.27 -2.5
572,360 + OH686_02715 0.27 -1.2
572,360 + OH686_02715 0.27 -2.0
572,360 + OH686_02715 0.27 -0.2
572,361 - OH686_02715 0.27 -3.5
572,361 - OH686_02715 0.27 -0.0
572,361 - OH686_02715 0.27 -1.3
572,361 - OH686_02715 0.27 -1.6
572,361 - OH686_02715 0.27 -0.1
572,361 - OH686_02715 0.27 -0.3
572,361 - OH686_02715 0.27 -0.2
572,361 - OH686_02715 0.27 -1.0
572,361 - OH686_02715 0.27 -0.9
572,361 - OH686_02715 0.27 +0.8
572,361 - OH686_02715 0.27 +0.0
572,361 - OH686_02715 0.27 +0.2
572,361 - OH686_02715 0.27 -1.5
572,509 + OH686_02715 0.33 -0.4
572,509 + OH686_02715 0.33 +0.6
572,509 + OH686_02715 0.33 -0.3
572,509 + OH686_02715 0.33 -0.9
572,509 + OH686_02715 0.33 -1.4
572,510 - OH686_02715 0.33 -1.5
572,510 - OH686_02715 0.33 +1.0
572,510 - OH686_02715 0.33 -0.7
572,510 - OH686_02715 0.33 -0.4
572,726 - OH686_02715 0.43 -1.1
572,726 - OH686_02715 0.43 -0.5
572,726 - OH686_02715 0.43 -1.2
572,726 - OH686_02715 0.43 -0.2

Or see this region's nucleotide sequence